ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:01817:01837

Extra

PDB:
ATOM 1 O3' A A1816 115.030 121.094 57.253 1.00 45.85 O
ATOM 2 P A A1817 113.504 120.804 57.674 1.00 46.11 P
ATOM 3 OP1 A A1817 113.305 119.341 57.540 1.00 47.03 O
ATOM 4 OP2 A A1817 112.635 121.738 56.902 1.00 44.47 O
ATOM 5 O5' A A1817 113.442 121.163 59.227 1.00 41.06 O
ATOM 6 C5' A A1817 114.155 120.368 60.195 1.00 40.54 C
ATOM 7 C4' A A1817 114.097 121.018 61.554 1.00 40.40 C
ATOM 8 O4' A A1817 114.702 122.329 61.467 1.00 38.83 O
ATOM 9 C3' A A1817 112.694 121.283 62.076 1.00 40.84 C
ATOM 10 O3' A A1817 112.144 120.147 62.726 1.00 42.27 O
ATOM 11 C2' A A1817 112.901 122.470 63.004 1.00 39.15 C
ATOM 12 O2' A A1817 113.435 122.126 64.265 1.00 39.29 O
ATOM 13 C1' A A1817 113.943 123.264 62.221 1.00 38.38 C
ATOM 14 N9 A A1817 113.339 124.205 61.281 1.00 36.68 N
ATOM 15 C8 A A1817 113.169 124.039 59.928 1.00 36.30 C
ATOM 16 N7 A A1817 112.598 125.058 59.340 1.00 36.41 N
ATOM 17 C5 A A1817 112.377 125.957 60.373 1.00 34.73 C
ATOM 18 C6 A A1817 111.806 127.236 60.401 1.00 33.66 C
ATOM 19 N6 A A1817 111.353 127.870 59.321 1.00 32.19 N
ATOM 20 N1 A A1817 111.724 127.855 61.591 1.00 35.11 N
ATOM 21 C2 A A1817 112.201 127.231 62.672 1.00 36.94 C
ATOM 22 N3 A A1817 112.772 126.036 62.771 1.00 36.34 N
ATOM 23 C4 A A1817 112.826 125.442 61.573 1.00 35.21 C
ATOM 24 P U A1818 110.655 119.676 62.364 1.00 44.12 P
ATOM 25 OP1 U A1818 110.311 118.563 63.274 1.00 44.34 O
ATOM 26 OP2 U A1818 110.601 119.475 60.890 1.00 43.21 O
ATOM 27 O5' U A1818 109.751 120.922 62.766 1.00 43.00 O
TER

ATOM 1 O3' G B1836 111.572 132.586 65.977 1.00 47.00 O
ATOM 2 P U B1837 110.420 132.504 67.125 1.00 44.88 P
ATOM 3 OP1 U B1837 109.233 133.230 66.619 1.00 46.43 O
ATOM 4 OP2 U B1837 110.951 132.861 68.461 1.00 41.89 O
ATOM 5 O5' U B1837 110.049 130.952 67.142 1.00 45.06 O
ATOM 6 C5' U B1837 109.571 130.308 65.936 1.00 45.25 C
ATOM 7 C4' U B1837 109.835 128.815 65.965 1.00 44.86 C
ATOM 8 O4' U B1837 111.259 128.539 66.055 1.00 43.53 O
ATOM 9 C3' U B1837 109.244 128.037 67.124 1.00 44.01 C
ATOM 10 O3' U B1837 107.858 127.788 66.925 1.00 42.97 O
ATOM 11 C2' U B1837 110.087 126.763 67.115 1.00 43.29 C
ATOM 12 O2' U B1837 109.708 125.835 66.120 1.00 43.22 O
ATOM 13 C1' U B1837 111.461 127.319 66.751 1.00 42.01 C
ATOM 14 N1 U B1837 112.318 127.576 67.917 1.00 42.22 N
ATOM 15 C2 U B1837 113.131 126.552 68.345 1.00 44.13 C
ATOM 16 O2 U B1837 113.123 125.447 67.840 1.00 46.29 O
ATOM 17 N3 U B1837 113.953 126.863 69.396 1.00 44.60 N
ATOM 18 C4 U B1837 114.029 128.058 70.060 1.00 43.61 C
ATOM 19 O4 U B1837 114.875 128.206 70.939 1.00 44.94 O
ATOM 20 C5 U B1837 113.131 129.054 69.586 1.00 42.73 C
ATOM 21 C6 U B1837 112.328 128.786 68.553 1.00 41.61 C
ATOM 22 P C B1838 106.866 127.786 68.183 1.00 43.19 P
ATOM 23 OP1 C B1838 105.487 127.607 67.673 1.00 40.42 O
ATOM 24 OP2 C B1838 107.193 128.969 69.039 1.00 42.47 O
ATOM 25 O5' C B1838 107.279 126.472 68.978 1.00 42.09 O
TER

Atoms:
OP1: (113.305,119.341,57.540)
OP2: (112.635,121.738,56.902)
C3': (112.694,121.283,62.076)
C1': (113.943,123.264,62.221)
C5': (114.155,120.368,60.195)
O4': (114.702,122.329,61.467)
C8: (113.169,124.039,59.928)
O2': (113.435,122.126,64.265)
C6: (111.806,127.236,60.401)
C5: (112.377,125.957,60.373)
C4: (112.826,125.442,61.573)
P: (113.504,120.804,57.674)
C4': (114.097,121.018,61.554)
C2': (112.901,122.470,63.004)
C2: (112.201,127.231,62.672)
N1: (111.724,127.855,61.591)
N3: (112.772,126.036,62.771)
N6: (111.353,127.870,59.321)
N7: (112.598,125.058,59.340)
N9: (113.339,124.205,61.281)
O5': (113.442,121.163,59.227)
O3': (112.144,120.147,62.726)
C4: (114.029,128.058,70.060)
N3: (113.953,126.863,69.396)
OP1: (109.233,133.230,66.619)
OP2: (110.951,132.861,68.461)
C2: (113.131,126.552,68.345)
C1': (111.461,127.319,66.751)
C3': (109.244,128.037,67.124)
O5': (110.049,130.952,67.142)
O4': (111.259,128.539,66.055)
C5': (109.571,130.308,65.936)
P: (110.420,132.504,67.125)
C4': (109.835,128.815,65.965)
C2': (110.087,126.763,67.115)
O2': (109.708,125.835,66.120)
N1: (112.318,127.576,67.917)
O4: (114.875,128.206,70.939)
O2: (113.123,125.447,67.840)
C6: (112.328,128.786,68.553)
C5: (113.131,129.054,69.586)
O3': (107.858,127.788,66.925)
Image (generated by PyMOL):
PyMOL image
show in jmol