Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:B1:B2
Extra
PDB:
ATOM 1 O3' G A 0 -17.302 8.080 19.590 1.00 80.00 O
ATOM 2 P G A 1 -17.645 6.735 20.402 1.00 78.31 P
ATOM 3 OP1 G A 1 -16.424 5.884 20.489 1.00 78.91 O
ATOM 4 OP2 G A 1 -18.895 6.174 19.803 1.00 77.78 O
ATOM 5 O5' G A 1 -17.980 7.240 21.875 1.00 75.74 O
ATOM 6 C5' G A 1 -18.807 6.447 22.734 1.00 72.01 C
ATOM 7 C4' G A 1 -19.356 7.281 23.863 1.00 69.66 C
ATOM 8 O4' G A 1 -19.807 8.570 23.371 1.00 69.23 O
ATOM 9 C3' G A 1 -20.587 6.657 24.485 1.00 68.26 C
ATOM 10 O3' G A 1 -20.251 5.670 25.436 1.00 66.62 O
ATOM 11 C2' G A 1 -21.341 7.853 25.050 1.00 67.94 C
ATOM 12 O2' G A 1 -20.883 8.241 26.330 1.00 67.11 O
ATOM 13 C1' G A 1 -21.029 8.931 24.006 1.00 67.96 C
ATOM 14 N9 G A 1 -22.059 9.035 22.970 1.00 66.88 N
ATOM 15 C8 G A 1 -21.876 8.881 21.614 1.00 66.65 C
ATOM 16 N7 G A 1 -22.983 8.981 20.931 1.00 65.89 N
ATOM 17 C5 G A 1 -23.958 9.224 21.887 1.00 65.15 C
ATOM 18 C6 G A 1 -25.349 9.400 21.739 1.00 64.45 C
ATOM 19 O6 G A 1 -26.016 9.356 20.706 1.00 63.81 O
ATOM 20 N1 G A 1 -25.971 9.635 22.962 1.00 64.11 N
ATOM 21 C2 G A 1 -25.333 9.682 24.175 1.00 64.49 C
ATOM 22 N2 G A 1 -26.110 9.928 25.244 1.00 63.26 N
ATOM 23 N3 G A 1 -24.028 9.503 24.331 1.00 65.41 N
ATOM 24 C4 G A 1 -23.406 9.279 23.150 1.00 65.85 C
ATOM 25 P G A 2 -20.855 4.197 25.268 1.00 65.43 P
ATOM 26 OP1 G A 2 -20.280 3.334 26.334 1.00 65.89 O
ATOM 27 OP2 G A 2 -20.697 3.809 23.840 1.00 65.10 O
ATOM 28 O5' G A 2 -22.414 4.399 25.540 1.00 64.75 O
TER
ATOM 1 O3' G B 1 -20.251 5.670 25.436 1.00 66.62 O
ATOM 2 P G B 2 -20.855 4.197 25.268 1.00 65.43 P
ATOM 3 OP1 G B 2 -20.280 3.334 26.334 1.00 65.89 O
ATOM 4 OP2 G B 2 -20.697 3.809 23.840 1.00 65.10 O
ATOM 5 O5' G B 2 -22.414 4.399 25.540 1.00 64.75 O
ATOM 6 C5' G B 2 -22.898 4.846 26.827 1.00 62.51 C
ATOM 7 C4' G B 2 -24.358 5.230 26.733 1.00 61.21 C
ATOM 8 O4' G B 2 -24.491 6.389 25.873 1.00 60.31 O
ATOM 9 C3' G B 2 -25.276 4.185 26.112 1.00 60.36 C
ATOM 10 O3' G B 2 -25.724 3.231 27.062 1.00 59.85 O
ATOM 11 C2' G B 2 -26.418 5.025 25.561 1.00 60.09 C
ATOM 12 O2' G B 2 -27.387 5.367 26.530 1.00 60.11 O
ATOM 13 C1' G B 2 -25.681 6.286 25.115 1.00 59.86 C
ATOM 14 N9 G B 2 -25.321 6.208 23.705 1.00 59.57 N
ATOM 15 C8 G B 2 -24.065 6.058 23.162 1.00 59.83 C
ATOM 16 N7 G B 2 -24.075 6.007 21.858 1.00 59.96 N
ATOM 17 C5 G B 2 -25.416 6.132 21.521 1.00 59.60 C
ATOM 18 C6 G B 2 -26.048 6.145 20.257 1.00 59.77 C
ATOM 19 O6 G B 2 -25.532 6.047 19.135 1.00 60.88 O
ATOM 20 N1 G B 2 -27.426 6.285 20.378 1.00 58.71 N
ATOM 21 C2 G B 2 -28.106 6.394 21.563 1.00 58.06 C
ATOM 22 N2 G B 2 -29.431 6.499 21.476 1.00 58.90 N
ATOM 23 N3 G B 2 -27.532 6.392 22.743 1.00 58.04 N
ATOM 24 C4 G B 2 -26.195 6.257 22.650 1.00 59.14 C
ATOM 25 P A B 3 -25.941 1.702 26.612 1.00 59.41 P
ATOM 26 OP1 A B 3 -25.939 0.857 27.836 1.00 59.14 O
ATOM 27 OP2 A B 3 -24.975 1.422 25.521 1.00 59.58 O
ATOM 28 O5' A B 3 -27.407 1.678 25.989 1.00 58.71 O
TER
ATOM 2 P G A 1 -17.645 6.735 20.402 1.00 78.31 P
ATOM 3 OP1 G A 1 -16.424 5.884 20.489 1.00 78.91 O
ATOM 4 OP2 G A 1 -18.895 6.174 19.803 1.00 77.78 O
ATOM 5 O5' G A 1 -17.980 7.240 21.875 1.00 75.74 O
ATOM 6 C5' G A 1 -18.807 6.447 22.734 1.00 72.01 C
ATOM 7 C4' G A 1 -19.356 7.281 23.863 1.00 69.66 C
ATOM 8 O4' G A 1 -19.807 8.570 23.371 1.00 69.23 O
ATOM 9 C3' G A 1 -20.587 6.657 24.485 1.00 68.26 C
ATOM 10 O3' G A 1 -20.251 5.670 25.436 1.00 66.62 O
ATOM 11 C2' G A 1 -21.341 7.853 25.050 1.00 67.94 C
ATOM 12 O2' G A 1 -20.883 8.241 26.330 1.00 67.11 O
ATOM 13 C1' G A 1 -21.029 8.931 24.006 1.00 67.96 C
ATOM 14 N9 G A 1 -22.059 9.035 22.970 1.00 66.88 N
ATOM 15 C8 G A 1 -21.876 8.881 21.614 1.00 66.65 C
ATOM 16 N7 G A 1 -22.983 8.981 20.931 1.00 65.89 N
ATOM 17 C5 G A 1 -23.958 9.224 21.887 1.00 65.15 C
ATOM 18 C6 G A 1 -25.349 9.400 21.739 1.00 64.45 C
ATOM 19 O6 G A 1 -26.016 9.356 20.706 1.00 63.81 O
ATOM 20 N1 G A 1 -25.971 9.635 22.962 1.00 64.11 N
ATOM 21 C2 G A 1 -25.333 9.682 24.175 1.00 64.49 C
ATOM 22 N2 G A 1 -26.110 9.928 25.244 1.00 63.26 N
ATOM 23 N3 G A 1 -24.028 9.503 24.331 1.00 65.41 N
ATOM 24 C4 G A 1 -23.406 9.279 23.150 1.00 65.85 C
ATOM 25 P G A 2 -20.855 4.197 25.268 1.00 65.43 P
ATOM 26 OP1 G A 2 -20.280 3.334 26.334 1.00 65.89 O
ATOM 27 OP2 G A 2 -20.697 3.809 23.840 1.00 65.10 O
ATOM 28 O5' G A 2 -22.414 4.399 25.540 1.00 64.75 O
TER
ATOM 1 O3' G B 1 -20.251 5.670 25.436 1.00 66.62 O
ATOM 2 P G B 2 -20.855 4.197 25.268 1.00 65.43 P
ATOM 3 OP1 G B 2 -20.280 3.334 26.334 1.00 65.89 O
ATOM 4 OP2 G B 2 -20.697 3.809 23.840 1.00 65.10 O
ATOM 5 O5' G B 2 -22.414 4.399 25.540 1.00 64.75 O
ATOM 6 C5' G B 2 -22.898 4.846 26.827 1.00 62.51 C
ATOM 7 C4' G B 2 -24.358 5.230 26.733 1.00 61.21 C
ATOM 8 O4' G B 2 -24.491 6.389 25.873 1.00 60.31 O
ATOM 9 C3' G B 2 -25.276 4.185 26.112 1.00 60.36 C
ATOM 10 O3' G B 2 -25.724 3.231 27.062 1.00 59.85 O
ATOM 11 C2' G B 2 -26.418 5.025 25.561 1.00 60.09 C
ATOM 12 O2' G B 2 -27.387 5.367 26.530 1.00 60.11 O
ATOM 13 C1' G B 2 -25.681 6.286 25.115 1.00 59.86 C
ATOM 14 N9 G B 2 -25.321 6.208 23.705 1.00 59.57 N
ATOM 15 C8 G B 2 -24.065 6.058 23.162 1.00 59.83 C
ATOM 16 N7 G B 2 -24.075 6.007 21.858 1.00 59.96 N
ATOM 17 C5 G B 2 -25.416 6.132 21.521 1.00 59.60 C
ATOM 18 C6 G B 2 -26.048 6.145 20.257 1.00 59.77 C
ATOM 19 O6 G B 2 -25.532 6.047 19.135 1.00 60.88 O
ATOM 20 N1 G B 2 -27.426 6.285 20.378 1.00 58.71 N
ATOM 21 C2 G B 2 -28.106 6.394 21.563 1.00 58.06 C
ATOM 22 N2 G B 2 -29.431 6.499 21.476 1.00 58.90 N
ATOM 23 N3 G B 2 -27.532 6.392 22.743 1.00 58.04 N
ATOM 24 C4 G B 2 -26.195 6.257 22.650 1.00 59.14 C
ATOM 25 P A B 3 -25.941 1.702 26.612 1.00 59.41 P
ATOM 26 OP1 A B 3 -25.939 0.857 27.836 1.00 59.14 O
ATOM 27 OP2 A B 3 -24.975 1.422 25.521 1.00 59.58 O
ATOM 28 O5' A B 3 -27.407 1.678 25.989 1.00 58.71 O
TER
Atoms:
OP1: (-16.424,5.884,20.489)
OP2: (-18.895,6.174,19.803)
C3': (-20.587,6.657,24.485)
C1': (-21.029,8.931,24.006)
C5': (-18.807,6.447,22.734)
O6: (-26.016,9.356,20.706)
O4': (-19.807,8.570,23.371)
C8: (-21.876,8.881,21.614)
C2: (-25.333,9.682,24.175)
C6: (-25.349,9.400,21.739)
C5: (-23.958,9.224,21.887)
C4: (-23.406,9.279,23.150)
P: (-17.645,6.735,20.402)
C4': (-19.356,7.281,23.863)
C2': (-21.341,7.853,25.050)
O2': (-20.883,8.241,26.330)
N1: (-25.971,9.635,22.962)
N2: (-26.110,9.928,25.244)
N3: (-24.028,9.503,24.331)
N7: (-22.983,8.981,20.931)
N9: (-22.059,9.035,22.970)
O5': (-17.980,7.240,21.875)
O3': (-20.251,5.670,25.436)
OP2: (-18.895,6.174,19.803)
C3': (-20.587,6.657,24.485)
C1': (-21.029,8.931,24.006)
C5': (-18.807,6.447,22.734)
O6: (-26.016,9.356,20.706)
O4': (-19.807,8.570,23.371)
C8: (-21.876,8.881,21.614)
C2: (-25.333,9.682,24.175)
C6: (-25.349,9.400,21.739)
C5: (-23.958,9.224,21.887)
C4: (-23.406,9.279,23.150)
P: (-17.645,6.735,20.402)
C4': (-19.356,7.281,23.863)
C2': (-21.341,7.853,25.050)
O2': (-20.883,8.241,26.330)
N1: (-25.971,9.635,22.962)
N2: (-26.110,9.928,25.244)
N3: (-24.028,9.503,24.331)
N7: (-22.983,8.981,20.931)
N9: (-22.059,9.035,22.970)
O5': (-17.980,7.240,21.875)
O3': (-20.251,5.670,25.436)
OP1: (-20.280,3.334,26.334)
OP2: (-20.697,3.809,23.840)
C3': (-25.276,4.185,26.112)
C1': (-25.681,6.286,25.115)
C5': (-22.898,4.846,26.827)
O6: (-25.532,6.047,19.135)
O4': (-24.491,6.389,25.873)
C8: (-24.065,6.058,23.162)
C2: (-28.106,6.394,21.563)
C6: (-26.048,6.145,20.257)
C5: (-25.416,6.132,21.521)
C4: (-26.195,6.257,22.650)
P: (-20.855,4.197,25.268)
C4': (-24.358,5.230,26.733)
C2': (-26.418,5.025,25.561)
O2': (-27.387,5.367,26.530)
N1: (-27.426,6.285,20.378)
N2: (-29.431,6.499,21.476)
N3: (-27.532,6.392,22.743)
N7: (-24.075,6.007,21.858)
N9: (-25.321,6.208,23.705)
O5': (-22.414,4.399,25.540)
O3': (-25.724,3.231,27.062)
OP2: (-20.697,3.809,23.840)
C3': (-25.276,4.185,26.112)
C1': (-25.681,6.286,25.115)
C5': (-22.898,4.846,26.827)
O6: (-25.532,6.047,19.135)
O4': (-24.491,6.389,25.873)
C8: (-24.065,6.058,23.162)
C2: (-28.106,6.394,21.563)
C6: (-26.048,6.145,20.257)
C5: (-25.416,6.132,21.521)
C4: (-26.195,6.257,22.650)
P: (-20.855,4.197,25.268)
C4': (-24.358,5.230,26.733)
C2': (-26.418,5.025,25.561)
O2': (-27.387,5.367,26.530)
N1: (-27.426,6.285,20.378)
N2: (-29.431,6.499,21.476)
N3: (-27.532,6.392,22.743)
N7: (-24.075,6.007,21.858)
N9: (-25.321,6.208,23.705)
O5': (-22.414,4.399,25.540)
O3': (-25.724,3.231,27.062)
Image (generated by PyMOL):