Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11951:11936
Extra
PDB:
ATOM 1 O3' A A1950 3.704 14.594 86.609 1.00 37.59 O
ATOM 2 P A A1951 2.701 14.060 87.713 1.00 40.95 P
ATOM 3 OP1 A A1951 1.581 15.021 87.761 1.00 41.32 O
ATOM 4 OP2 A A1951 3.487 13.814 88.944 1.00 40.93 O
ATOM 5 O5' A A1951 2.228 12.683 87.101 1.00 40.74 O
ATOM 6 C5' A A1951 0.922 12.225 87.325 1.00 40.93 C
ATOM 7 C4' A A1951 0.670 10.955 86.605 1.00 40.70 C
ATOM 8 O4' A A1951 0.628 11.216 85.188 1.00 40.60 O
ATOM 9 C3' A A1951 1.730 9.881 86.807 1.00 40.38 C
ATOM 10 O3' A A1951 1.104 8.660 87.022 1.00 40.35 O
ATOM 11 C2' A A1951 2.403 9.785 85.469 1.00 40.11 C
ATOM 12 O2' A A1951 2.836 8.491 85.200 1.00 39.83 O
ATOM 13 C1' A A1951 1.264 10.162 84.558 1.00 40.27 C
ATOM 14 N9 A A1951 1.629 10.524 83.196 1.00 40.13 N
ATOM 15 C8 A A1951 2.855 10.544 82.669 1.00 39.87 C
ATOM 16 N7 A A1951 2.860 10.782 81.393 1.00 39.80 N
ATOM 17 C5 A A1951 1.542 10.886 81.038 1.00 40.02 C
ATOM 18 C6 A A1951 0.922 11.157 79.816 1.00 40.09 C
ATOM 19 N6 A A1951 1.591 11.371 78.695 1.00 39.92 N
ATOM 20 N1 A A1951 -0.408 11.217 79.753 1.00 40.35 N
ATOM 21 C2 A A1951 -1.050 11.008 80.896 1.00 40.52 C
ATOM 22 N3 A A1951 -0.573 10.757 82.119 1.00 40.48 N
ATOM 23 C4 A A1951 0.765 10.697 82.133 1.00 40.22 C
ATOM 24 P A A1952 1.368 7.850 88.349 1.00 40.01 P
ATOM 25 OP1 A A1952 0.579 6.571 88.251 1.00 39.98 O
ATOM 26 OP2 A A1952 1.114 8.780 89.471 1.00 40.31 O
ATOM 27 O5' A A1952 2.913 7.520 88.253 1.00 39.69 O
TER
ATOM 1 O3' C B1935 -7.044 9.683 79.259 1.00 44.70 O
ATOM 2 P U B1936 -7.411 9.178 80.732 1.00 42.81 P
ATOM 3 OP1 U B1936 -7.446 7.704 80.688 1.00 42.62 O
ATOM 4 OP2 U B1936 -8.628 9.920 81.184 1.00 43.22 O
ATOM 5 O5' U B1936 -6.173 9.655 81.586 1.00 42.66 O
ATOM 6 C5' U B1936 -4.877 9.159 81.347 1.00 42.30 C
ATOM 7 C4' U B1936 -3.918 9.737 82.327 1.00 42.25 C
ATOM 8 O4' U B1936 -3.700 11.143 82.041 1.00 42.38 O
ATOM 9 C3' U B1936 -4.366 9.711 83.788 1.00 42.46 C
ATOM 10 O3' U B1936 -4.213 8.412 84.389 1.00 42.31 O
ATOM 11 C2' U B1936 -3.470 10.790 84.383 1.00 42.48 C
ATOM 12 O2' U B1936 -2.135 10.301 84.535 1.00 42.16 O
ATOM 13 C1' U B1936 -3.491 11.838 83.250 1.00 42.54 C
ATOM 14 N1 U B1936 -4.607 12.820 83.422 1.00 42.94 N
ATOM 15 C2 U B1936 -4.446 13.995 84.175 1.00 43.16 C
ATOM 16 O2 U B1936 -3.421 14.325 84.741 1.00 43.06 O
ATOM 17 N3 U B1936 -5.532 14.809 84.276 1.00 43.54 N
ATOM 18 C4 U B1936 -6.751 14.591 83.725 1.00 43.72 C
ATOM 19 O4 U B1936 -7.609 15.432 83.910 1.00 44.07 O
ATOM 20 C5 U B1936 -6.881 13.417 82.963 1.00 43.49 C
ATOM 21 C6 U B1936 -5.837 12.602 82.844 1.00 43.12 C
ATOM 22 P G B1937 -4.815 8.059 85.852 1.00 41.87 P
ATOM 23 OP1 G B1937 -4.544 6.631 86.099 1.00 41.66 O
ATOM 24 OP2 G B1937 -6.185 8.510 85.873 1.00 42.22 O
ATOM 25 O5' G B1937 -3.946 8.958 86.833 1.00 41.91 O
TER
ATOM 2 P A A1951 2.701 14.060 87.713 1.00 40.95 P
ATOM 3 OP1 A A1951 1.581 15.021 87.761 1.00 41.32 O
ATOM 4 OP2 A A1951 3.487 13.814 88.944 1.00 40.93 O
ATOM 5 O5' A A1951 2.228 12.683 87.101 1.00 40.74 O
ATOM 6 C5' A A1951 0.922 12.225 87.325 1.00 40.93 C
ATOM 7 C4' A A1951 0.670 10.955 86.605 1.00 40.70 C
ATOM 8 O4' A A1951 0.628 11.216 85.188 1.00 40.60 O
ATOM 9 C3' A A1951 1.730 9.881 86.807 1.00 40.38 C
ATOM 10 O3' A A1951 1.104 8.660 87.022 1.00 40.35 O
ATOM 11 C2' A A1951 2.403 9.785 85.469 1.00 40.11 C
ATOM 12 O2' A A1951 2.836 8.491 85.200 1.00 39.83 O
ATOM 13 C1' A A1951 1.264 10.162 84.558 1.00 40.27 C
ATOM 14 N9 A A1951 1.629 10.524 83.196 1.00 40.13 N
ATOM 15 C8 A A1951 2.855 10.544 82.669 1.00 39.87 C
ATOM 16 N7 A A1951 2.860 10.782 81.393 1.00 39.80 N
ATOM 17 C5 A A1951 1.542 10.886 81.038 1.00 40.02 C
ATOM 18 C6 A A1951 0.922 11.157 79.816 1.00 40.09 C
ATOM 19 N6 A A1951 1.591 11.371 78.695 1.00 39.92 N
ATOM 20 N1 A A1951 -0.408 11.217 79.753 1.00 40.35 N
ATOM 21 C2 A A1951 -1.050 11.008 80.896 1.00 40.52 C
ATOM 22 N3 A A1951 -0.573 10.757 82.119 1.00 40.48 N
ATOM 23 C4 A A1951 0.765 10.697 82.133 1.00 40.22 C
ATOM 24 P A A1952 1.368 7.850 88.349 1.00 40.01 P
ATOM 25 OP1 A A1952 0.579 6.571 88.251 1.00 39.98 O
ATOM 26 OP2 A A1952 1.114 8.780 89.471 1.00 40.31 O
ATOM 27 O5' A A1952 2.913 7.520 88.253 1.00 39.69 O
TER
ATOM 1 O3' C B1935 -7.044 9.683 79.259 1.00 44.70 O
ATOM 2 P U B1936 -7.411 9.178 80.732 1.00 42.81 P
ATOM 3 OP1 U B1936 -7.446 7.704 80.688 1.00 42.62 O
ATOM 4 OP2 U B1936 -8.628 9.920 81.184 1.00 43.22 O
ATOM 5 O5' U B1936 -6.173 9.655 81.586 1.00 42.66 O
ATOM 6 C5' U B1936 -4.877 9.159 81.347 1.00 42.30 C
ATOM 7 C4' U B1936 -3.918 9.737 82.327 1.00 42.25 C
ATOM 8 O4' U B1936 -3.700 11.143 82.041 1.00 42.38 O
ATOM 9 C3' U B1936 -4.366 9.711 83.788 1.00 42.46 C
ATOM 10 O3' U B1936 -4.213 8.412 84.389 1.00 42.31 O
ATOM 11 C2' U B1936 -3.470 10.790 84.383 1.00 42.48 C
ATOM 12 O2' U B1936 -2.135 10.301 84.535 1.00 42.16 O
ATOM 13 C1' U B1936 -3.491 11.838 83.250 1.00 42.54 C
ATOM 14 N1 U B1936 -4.607 12.820 83.422 1.00 42.94 N
ATOM 15 C2 U B1936 -4.446 13.995 84.175 1.00 43.16 C
ATOM 16 O2 U B1936 -3.421 14.325 84.741 1.00 43.06 O
ATOM 17 N3 U B1936 -5.532 14.809 84.276 1.00 43.54 N
ATOM 18 C4 U B1936 -6.751 14.591 83.725 1.00 43.72 C
ATOM 19 O4 U B1936 -7.609 15.432 83.910 1.00 44.07 O
ATOM 20 C5 U B1936 -6.881 13.417 82.963 1.00 43.49 C
ATOM 21 C6 U B1936 -5.837 12.602 82.844 1.00 43.12 C
ATOM 22 P G B1937 -4.815 8.059 85.852 1.00 41.87 P
ATOM 23 OP1 G B1937 -4.544 6.631 86.099 1.00 41.66 O
ATOM 24 OP2 G B1937 -6.185 8.510 85.873 1.00 42.22 O
ATOM 25 O5' G B1937 -3.946 8.958 86.833 1.00 41.91 O
TER
Atoms:
OP1: (1.581,15.021,87.761)
OP2: (3.487,13.814,88.944)
C3': (1.730,9.881,86.807)
C1': (1.264,10.162,84.558)
C5': (0.922,12.225,87.325)
O4': (0.628,11.216,85.188)
C8: (2.855,10.544,82.669)
O2': (2.836,8.491,85.200)
C6: (0.922,11.157,79.816)
C5: (1.542,10.886,81.038)
C4: (0.765,10.697,82.133)
P: (2.701,14.060,87.713)
C4': (0.670,10.955,86.605)
C2': (2.403,9.785,85.469)
C2: (-1.050,11.008,80.896)
N1: (-0.408,11.217,79.753)
N3: (-0.573,10.757,82.119)
N6: (1.591,11.371,78.695)
N7: (2.860,10.782,81.393)
N9: (1.629,10.524,83.196)
O5': (2.228,12.683,87.101)
O3': (1.104,8.660,87.022)
OP2: (3.487,13.814,88.944)
C3': (1.730,9.881,86.807)
C1': (1.264,10.162,84.558)
C5': (0.922,12.225,87.325)
O4': (0.628,11.216,85.188)
C8: (2.855,10.544,82.669)
O2': (2.836,8.491,85.200)
C6: (0.922,11.157,79.816)
C5: (1.542,10.886,81.038)
C4: (0.765,10.697,82.133)
P: (2.701,14.060,87.713)
C4': (0.670,10.955,86.605)
C2': (2.403,9.785,85.469)
C2: (-1.050,11.008,80.896)
N1: (-0.408,11.217,79.753)
N3: (-0.573,10.757,82.119)
N6: (1.591,11.371,78.695)
N7: (2.860,10.782,81.393)
N9: (1.629,10.524,83.196)
O5': (2.228,12.683,87.101)
O3': (1.104,8.660,87.022)
C4: (-6.751,14.591,83.725)
N3: (-5.532,14.809,84.276)
OP1: (-7.446,7.704,80.688)
OP2: (-8.628,9.920,81.184)
C2: (-4.446,13.995,84.175)
C1': (-3.491,11.838,83.250)
C3': (-4.366,9.711,83.788)
O5': (-6.173,9.655,81.586)
O4': (-3.700,11.143,82.041)
C5': (-4.877,9.159,81.347)
P: (-7.411,9.178,80.732)
C4': (-3.918,9.737,82.327)
C2': (-3.470,10.790,84.383)
O2': (-2.135,10.301,84.535)
N1: (-4.607,12.820,83.422)
O4: (-7.609,15.432,83.910)
O2: (-3.421,14.325,84.741)
C6: (-5.837,12.602,82.844)
C5: (-6.881,13.417,82.963)
O3': (-4.213,8.412,84.389)
N3: (-5.532,14.809,84.276)
OP1: (-7.446,7.704,80.688)
OP2: (-8.628,9.920,81.184)
C2: (-4.446,13.995,84.175)
C1': (-3.491,11.838,83.250)
C3': (-4.366,9.711,83.788)
O5': (-6.173,9.655,81.586)
O4': (-3.700,11.143,82.041)
C5': (-4.877,9.159,81.347)
P: (-7.411,9.178,80.732)
C4': (-3.918,9.737,82.327)
C2': (-3.470,10.790,84.383)
O2': (-2.135,10.301,84.535)
N1: (-4.607,12.820,83.422)
O4: (-7.609,15.432,83.910)
O2: (-3.421,14.325,84.741)
C6: (-5.837,12.602,82.844)
C5: (-6.881,13.417,82.963)
O3': (-4.213,8.412,84.389)
Image (generated by PyMOL):