ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQF:A745:A1484

Extra

PDB:
ATOM 1 O3' A A 744 175.384 100.170 -51.704 1.00 55.99 O
ATOM 2 P A A 745 176.131 98.847 -52.231 1.00 58.54 P
ATOM 3 OP1 A A 745 176.812 99.261 -53.499 1.00 61.29 O
ATOM 4 OP2 A A 745 175.195 97.698 -52.226 1.00 56.20 O
ATOM 5 O5' A A 745 177.256 98.578 -51.124 1.00 58.23 O
ATOM 6 C5' A A 745 178.303 99.543 -50.884 1.00 56.63 C
ATOM 7 C4' A A 745 179.157 99.121 -49.712 1.00 55.73 C
ATOM 8 O4' A A 745 178.383 99.216 -48.484 1.00 56.04 O
ATOM 9 C3' A A 745 179.662 97.686 -49.740 1.00 55.44 C
ATOM 10 O3' A A 745 180.838 97.536 -50.518 1.00 54.97 O
ATOM 11 C2' A A 745 179.899 97.398 -48.263 1.00 55.22 C
ATOM 12 O2' A A 745 181.121 97.960 -47.820 1.00 54.79 O
ATOM 13 C1' A A 745 178.725 98.142 -47.618 1.00 54.64 C
ATOM 14 N9 A A 745 177.547 97.277 -47.504 1.00 52.16 N
ATOM 15 C8 A A 745 176.461 97.252 -48.351 1.00 52.04 C
ATOM 16 N7 A A 745 175.566 96.346 -48.038 1.00 50.17 N
ATOM 17 C5 A A 745 176.084 95.742 -46.906 1.00 47.26 C
ATOM 18 C6 A A 745 175.607 94.712 -46.105 1.00 45.72 C
ATOM 19 N6 A A 745 174.464 94.079 -46.340 1.00 45.57 N
ATOM 20 N1 A A 745 176.352 94.341 -45.044 1.00 46.10 N
ATOM 21 C2 A A 745 177.515 94.975 -44.827 1.00 46.86 C
ATOM 22 N3 A A 745 178.081 95.963 -45.521 1.00 46.49 N
ATOM 23 C4 A A 745 177.303 96.307 -46.559 1.00 49.48 C
ATOM 24 P A A 746 181.128 96.137 -51.262 1.00 53.03 P
ATOM 25 OP1 A A 746 182.393 96.360 -52.013 1.00 49.86 O
ATOM 26 OP2 A A 746 179.890 95.744 -51.978 1.00 54.80 O
ATOM 27 O5' A A 746 181.363 95.110 -50.078 1.00 49.47 O
TER

ATOM 1 O3' G B1483 176.322 93.180 -38.702 1.00 55.56 O
ATOM 2 P U B1484 177.194 91.862 -38.431 1.00 57.17 P
ATOM 3 OP1 U B1484 176.289 90.671 -38.285 1.00 57.37 O
ATOM 4 OP2 U B1484 178.157 92.178 -37.340 1.00 57.77 O
ATOM 5 O5' U B1484 178.018 91.718 -39.791 1.00 58.90 O
ATOM 6 C5' U B1484 177.347 91.688 -41.072 1.00 58.53 C
ATOM 7 C4' U B1484 178.354 91.743 -42.198 1.00 59.11 C
ATOM 8 O4' U B1484 178.941 93.065 -42.274 1.00 59.14 O
ATOM 9 C3' U B1484 179.539 90.789 -42.116 1.00 58.72 C
ATOM 10 O3' U B1484 179.197 89.516 -42.637 1.00 59.44 O
ATOM 11 C2' U B1484 180.564 91.485 -42.999 1.00 59.46 C
ATOM 12 O2' U B1484 180.314 91.235 -44.364 1.00 60.38 O
ATOM 13 C1' U B1484 180.280 92.962 -42.710 1.00 59.87 C
ATOM 14 N1 U B1484 181.154 93.488 -41.650 1.00 61.65 N
ATOM 15 C2 U B1484 182.393 93.974 -42.019 1.00 62.50 C
ATOM 16 O2 U B1484 182.768 94.012 -43.180 1.00 63.55 O
ATOM 17 N3 U B1484 183.179 94.410 -40.977 1.00 63.39 N
ATOM 18 C4 U B1484 182.856 94.409 -39.631 1.00 63.30 C
ATOM 19 O4 U B1484 183.684 94.808 -38.803 1.00 66.97 O
ATOM 20 C5 U B1484 181.556 93.908 -39.335 1.00 61.97 C
ATOM 21 C6 U B1484 180.766 93.479 -40.326 1.00 61.84 C
ATOM 22 P A B1485 180.060 88.214 -42.238 1.00 59.88 P
ATOM 23 OP1 A B1485 179.461 87.067 -42.988 1.00 59.06 O
ATOM 24 OP2 A B1485 180.216 88.132 -40.771 1.00 60.36 O
ATOM 25 O5' A B1485 181.468 88.498 -42.876 1.00 60.41 O
TER

Atoms:
OP1: (176.812,99.261,-53.499)
OP2: (175.195,97.698,-52.226)
C3': (179.662,97.686,-49.740)
C1': (178.725,98.142,-47.618)
C5': (178.303,99.543,-50.884)
O4': (178.383,99.216,-48.484)
C8: (176.461,97.252,-48.351)
O2': (181.121,97.960,-47.820)
C6: (175.607,94.712,-46.105)
C5: (176.084,95.742,-46.906)
C4: (177.303,96.307,-46.559)
P: (176.131,98.847,-52.231)
C4': (179.157,99.121,-49.712)
C2': (179.899,97.398,-48.263)
C2: (177.515,94.975,-44.827)
N1: (176.352,94.341,-45.044)
N3: (178.081,95.963,-45.521)
N6: (174.464,94.079,-46.340)
N7: (175.566,96.346,-48.038)
N9: (177.547,97.277,-47.504)
O5': (177.256,98.578,-51.124)
O3': (180.838,97.536,-50.518)
C4: (182.856,94.409,-39.631)
N3: (183.179,94.410,-40.977)
OP1: (176.289,90.671,-38.285)
OP2: (178.157,92.178,-37.340)
C2: (182.393,93.974,-42.019)
C1': (180.280,92.962,-42.710)
C3': (179.539,90.789,-42.116)
O5': (178.018,91.718,-39.791)
O4': (178.941,93.065,-42.274)
C5': (177.347,91.688,-41.072)
P: (177.194,91.862,-38.431)
C4': (178.354,91.743,-42.198)
C2': (180.564,91.485,-42.999)
O2': (180.314,91.235,-44.364)
N1: (181.154,93.488,-41.650)
O4: (183.684,94.808,-38.803)
O2: (182.768,94.012,-43.180)
C6: (180.766,93.479,-40.326)
C5: (181.556,93.908,-39.335)
O3': (179.197,89.516,-42.637)
Image (generated by PyMOL):
PyMOL image
show in jmol