ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:0948:0968

Extra

PDB:
ATOM 1 O3' G A 947 64.951 52.141 120.188 1.00 81.52 O
ATOM 2 P A A 948 63.422 51.910 119.738 1.00 78.96 P
ATOM 3 OP1 A A 948 62.603 53.015 120.296 1.00 80.23 O
ATOM 4 OP2 A A 948 63.041 50.508 120.031 1.00 80.14 O
ATOM 5 O5' A A 948 63.472 52.057 118.152 1.00 75.11 O
ATOM 6 C5' A A 948 64.163 51.089 117.339 1.00 69.05 C
ATOM 7 C4' A A 948 64.433 51.656 115.965 1.00 66.11 C
ATOM 8 O4' A A 948 63.171 52.061 115.368 1.00 65.63 O
ATOM 9 C3' A A 948 65.286 52.914 115.919 1.00 64.37 C
ATOM 10 O3' A A 948 66.679 52.606 115.972 1.00 63.14 O
ATOM 11 C2' A A 948 64.853 53.543 114.599 1.00 63.94 C
ATOM 12 O2' A A 948 65.422 52.930 113.462 1.00 62.67 O
ATOM 13 C1' A A 948 63.353 53.247 114.609 1.00 63.37 C
ATOM 14 N9 A A 948 62.571 54.316 115.235 1.00 61.46 N
ATOM 15 C8 A A 948 61.767 54.232 116.344 1.00 61.38 C
ATOM 16 N7 A A 948 61.226 55.372 116.694 1.00 62.13 N
ATOM 17 C5 A A 948 61.698 56.270 115.746 1.00 60.59 C
ATOM 18 C6 A A 948 61.495 57.649 115.566 1.00 59.36 C
ATOM 19 N6 A A 948 60.742 58.400 116.372 1.00 58.79 N
ATOM 20 N1 A A 948 62.101 58.240 114.516 1.00 59.91 N
ATOM 21 C2 A A 948 62.859 57.489 113.707 1.00 61.11 C
ATOM 22 N3 A A 948 63.132 56.188 113.775 1.00 61.91 N
ATOM 23 C4 A A 948 62.515 55.630 114.832 1.00 61.34 C
ATOM 24 P C A 949 67.752 53.763 116.309 1.00 61.41 P
ATOM 25 OP1 C A 949 68.898 53.123 116.989 1.00 64.62 O
ATOM 26 OP2 C A 949 67.061 54.903 116.961 1.00 63.37 O
ATOM 27 O5' C A 949 68.272 54.237 114.882 1.00 61.12 O
TER

ATOM 1 O3' C B 967 65.809 62.161 107.936 1.00 44.28 O
ATOM 2 P U B 968 64.532 61.441 107.237 1.00 46.65 P
ATOM 3 OP1 U B 968 65.046 60.491 106.222 1.00 45.50 O
ATOM 4 OP2 U B 968 63.569 62.491 106.825 1.00 47.06 O
ATOM 5 O5' U B 968 63.846 60.580 108.390 1.00 46.51 O
ATOM 6 C5' U B 968 64.454 59.368 108.882 1.00 48.73 C
ATOM 7 C4' U B 968 63.513 58.657 109.836 1.00 51.33 C
ATOM 8 O4' U B 968 63.120 59.586 110.889 1.00 52.30 O
ATOM 9 C3' U B 968 62.207 58.136 109.240 1.00 51.78 C
ATOM 10 O3' U B 968 61.790 56.988 109.978 1.00 52.25 O
ATOM 11 C2' U B 968 61.238 59.282 109.514 1.00 52.00 C
ATOM 12 O2' U B 968 59.884 58.870 109.584 1.00 53.15 O
ATOM 13 C1' U B 968 61.717 59.747 110.887 1.00 51.10 C
ATOM 14 N1 U B 968 61.416 61.152 111.190 1.00 51.79 N
ATOM 15 C2 U B 968 60.457 61.410 112.154 1.00 52.37 C
ATOM 16 O2 U B 968 59.843 60.531 112.736 1.00 53.43 O
ATOM 17 N3 U B 968 60.242 62.740 112.413 1.00 52.71 N
ATOM 18 C4 U B 968 60.870 63.819 111.817 1.00 53.46 C
ATOM 19 O4 U B 968 60.572 64.964 112.169 1.00 52.33 O
ATOM 20 C5 U B 968 61.836 63.470 110.818 1.00 53.20 C
ATOM 21 C6 U B 968 62.070 62.181 110.546 1.00 52.96 C
ATOM 22 P C B 969 61.863 55.529 109.308 1.00 52.23 P
ATOM 23 OP1 C B 969 63.253 55.030 109.467 1.00 53.36 O
ATOM 24 OP2 C B 969 61.266 55.587 107.952 1.00 52.25 O
ATOM 25 O5' C B 969 60.916 54.657 110.244 1.00 51.66 O
TER

Atoms:
OP1: (62.603,53.015,120.296)
OP2: (63.041,50.508,120.031)
C3': (65.286,52.914,115.919)
C1': (63.353,53.247,114.609)
C5': (64.163,51.089,117.339)
O4': (63.171,52.061,115.368)
C8: (61.767,54.232,116.344)
O2': (65.422,52.930,113.462)
C6: (61.495,57.649,115.566)
C5: (61.698,56.270,115.746)
C4: (62.515,55.630,114.832)
P: (63.422,51.910,119.738)
C4': (64.433,51.656,115.965)
C2': (64.853,53.543,114.599)
C2: (62.859,57.489,113.707)
N1: (62.101,58.240,114.516)
N3: (63.132,56.188,113.775)
N6: (60.742,58.400,116.372)
N7: (61.226,55.372,116.694)
N9: (62.571,54.316,115.235)
O5': (63.472,52.057,118.152)
O3': (66.679,52.606,115.972)
C4: (60.870,63.819,111.817)
N3: (60.242,62.740,112.413)
OP1: (65.046,60.491,106.222)
OP2: (63.569,62.491,106.825)
C2: (60.457,61.410,112.154)
C1': (61.717,59.747,110.887)
C3': (62.207,58.136,109.240)
O5': (63.846,60.580,108.390)
O4': (63.120,59.586,110.889)
C5': (64.454,59.368,108.882)
P: (64.532,61.441,107.237)
C4': (63.513,58.657,109.836)
C2': (61.238,59.282,109.514)
O2': (59.884,58.870,109.584)
N1: (61.416,61.152,111.190)
O4: (60.572,64.964,112.169)
O2: (59.843,60.531,112.736)
C6: (62.070,62.181,110.546)
C5: (61.836,63.470,110.818)
O3': (61.790,56.988,109.978)
Image (generated by PyMOL):
PyMOL image
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