Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2960:21757
Extra
PDB:
ATOM 1 O3' A A 959 -44.355 0.303 108.425 1.00 66.62 O
ATOM 2 P A A 960 -42.814 -0.092 108.284 1.00 67.94 P
ATOM 3 OP1 A A 960 -42.540 -1.155 109.293 1.00 69.09 O
ATOM 4 OP2 A A 960 -42.063 1.150 108.358 1.00 67.19 O
ATOM 5 O5' A A 960 -42.740 -0.714 106.821 1.00 67.47 O
ATOM 6 C5' A A 960 -43.116 -2.066 106.612 1.00 68.20 C
ATOM 7 C4' A A 960 -42.984 -2.473 105.175 1.00 67.67 C
ATOM 8 O4' A A 960 -43.779 -1.601 104.343 1.00 66.86 O
ATOM 9 C3' A A 960 -41.595 -2.378 104.567 1.00 67.13 C
ATOM 10 O3' A A 960 -40.769 -3.454 104.941 1.00 67.87 O
ATOM 11 C2' A A 960 -41.917 -2.362 103.094 1.00 66.44 C
ATOM 12 O2' A A 960 -42.331 -3.651 102.679 1.00 67.08 O
ATOM 13 C1' A A 960 -43.140 -1.450 103.090 1.00 66.07 C
ATOM 14 N9 A A 960 -42.761 -0.050 102.953 1.00 65.16 N
ATOM 15 C8 A A 960 -42.632 0.805 104.005 1.00 65.17 C
ATOM 16 N7 A A 960 -42.263 1.990 103.623 1.00 64.30 N
ATOM 17 C5 A A 960 -42.171 1.894 102.235 1.00 63.69 C
ATOM 18 C6 A A 960 -41.829 2.838 101.251 1.00 62.73 C
ATOM 19 N6 A A 960 -41.526 4.090 101.557 1.00 62.19 N
ATOM 20 N1 A A 960 -41.822 2.433 99.966 1.00 62.39 N
ATOM 21 C2 A A 960 -42.149 1.151 99.731 1.00 63.01 C
ATOM 22 N3 A A 960 -42.493 0.167 100.562 1.00 63.94 N
ATOM 23 C4 A A 960 -42.480 0.619 101.810 1.00 64.23 C
ATOM 24 P A A 961 -39.201 -3.229 105.224 1.00 64.12 P
ATOM 25 OP1 A A 961 -38.654 -4.548 105.653 1.00 65.13 O
ATOM 26 OP2 A A 961 -39.078 -2.061 106.151 1.00 63.88 O
ATOM 27 O5' A A 961 -38.638 -2.838 103.789 1.00 63.12 O
TER
ATOM 1 O3' G B1756 -43.817 3.465 94.644 1.00 57.50 O
ATOM 2 P U B1757 -42.634 3.462 93.576 1.00 61.71 P
ATOM 3 OP1 U B1757 -42.288 4.865 93.327 1.00 61.25 O
ATOM 4 OP2 U B1757 -43.071 2.643 92.444 1.00 61.91 O
ATOM 5 O5' U B1757 -41.462 2.722 94.365 1.00 61.76 O
ATOM 6 C5' U B1757 -41.230 2.988 95.747 1.00 61.80 C
ATOM 7 C4' U B1757 -40.468 1.871 96.430 1.00 62.05 C
ATOM 8 O4' U B1757 -41.326 0.709 96.610 1.00 62.58 O
ATOM 9 C3' U B1757 -39.266 1.325 95.683 1.00 61.89 C
ATOM 10 O3' U B1757 -38.123 2.146 95.806 1.00 61.47 O
ATOM 11 C2' U B1757 -39.093 -0.066 96.287 1.00 62.35 C
ATOM 12 O2' U B1757 -38.407 0.022 97.523 1.00 62.36 O
ATOM 13 C1' U B1757 -40.550 -0.472 96.558 1.00 62.78 C
ATOM 14 N1 U B1757 -41.103 -1.364 95.500 1.00 63.04 N
ATOM 15 C2 U B1757 -40.934 -2.719 95.665 1.00 63.48 C
ATOM 16 O2 U B1757 -40.368 -3.206 96.613 1.00 63.66 O
ATOM 17 N3 U B1757 -41.440 -3.511 94.682 1.00 63.74 N
ATOM 18 C4 U B1757 -42.113 -3.125 93.561 1.00 63.62 C
ATOM 19 O4 U B1757 -42.506 -4.008 92.807 1.00 63.94 O
ATOM 20 C5 U B1757 -42.281 -1.717 93.431 1.00 63.17 C
ATOM 21 C6 U B1757 -41.788 -0.908 94.385 1.00 62.91 C
ATOM 22 P A B1758 -37.027 2.178 94.634 1.00 59.18 P
ATOM 23 OP1 A B1758 -36.010 3.195 95.008 1.00 58.79 O
ATOM 24 OP2 A B1758 -37.780 2.334 93.350 1.00 59.12 O
ATOM 25 O5' A B1758 -36.373 0.732 94.733 1.00 59.48 O
TER
ATOM 2 P A A 960 -42.814 -0.092 108.284 1.00 67.94 P
ATOM 3 OP1 A A 960 -42.540 -1.155 109.293 1.00 69.09 O
ATOM 4 OP2 A A 960 -42.063 1.150 108.358 1.00 67.19 O
ATOM 5 O5' A A 960 -42.740 -0.714 106.821 1.00 67.47 O
ATOM 6 C5' A A 960 -43.116 -2.066 106.612 1.00 68.20 C
ATOM 7 C4' A A 960 -42.984 -2.473 105.175 1.00 67.67 C
ATOM 8 O4' A A 960 -43.779 -1.601 104.343 1.00 66.86 O
ATOM 9 C3' A A 960 -41.595 -2.378 104.567 1.00 67.13 C
ATOM 10 O3' A A 960 -40.769 -3.454 104.941 1.00 67.87 O
ATOM 11 C2' A A 960 -41.917 -2.362 103.094 1.00 66.44 C
ATOM 12 O2' A A 960 -42.331 -3.651 102.679 1.00 67.08 O
ATOM 13 C1' A A 960 -43.140 -1.450 103.090 1.00 66.07 C
ATOM 14 N9 A A 960 -42.761 -0.050 102.953 1.00 65.16 N
ATOM 15 C8 A A 960 -42.632 0.805 104.005 1.00 65.17 C
ATOM 16 N7 A A 960 -42.263 1.990 103.623 1.00 64.30 N
ATOM 17 C5 A A 960 -42.171 1.894 102.235 1.00 63.69 C
ATOM 18 C6 A A 960 -41.829 2.838 101.251 1.00 62.73 C
ATOM 19 N6 A A 960 -41.526 4.090 101.557 1.00 62.19 N
ATOM 20 N1 A A 960 -41.822 2.433 99.966 1.00 62.39 N
ATOM 21 C2 A A 960 -42.149 1.151 99.731 1.00 63.01 C
ATOM 22 N3 A A 960 -42.493 0.167 100.562 1.00 63.94 N
ATOM 23 C4 A A 960 -42.480 0.619 101.810 1.00 64.23 C
ATOM 24 P A A 961 -39.201 -3.229 105.224 1.00 64.12 P
ATOM 25 OP1 A A 961 -38.654 -4.548 105.653 1.00 65.13 O
ATOM 26 OP2 A A 961 -39.078 -2.061 106.151 1.00 63.88 O
ATOM 27 O5' A A 961 -38.638 -2.838 103.789 1.00 63.12 O
TER
ATOM 1 O3' G B1756 -43.817 3.465 94.644 1.00 57.50 O
ATOM 2 P U B1757 -42.634 3.462 93.576 1.00 61.71 P
ATOM 3 OP1 U B1757 -42.288 4.865 93.327 1.00 61.25 O
ATOM 4 OP2 U B1757 -43.071 2.643 92.444 1.00 61.91 O
ATOM 5 O5' U B1757 -41.462 2.722 94.365 1.00 61.76 O
ATOM 6 C5' U B1757 -41.230 2.988 95.747 1.00 61.80 C
ATOM 7 C4' U B1757 -40.468 1.871 96.430 1.00 62.05 C
ATOM 8 O4' U B1757 -41.326 0.709 96.610 1.00 62.58 O
ATOM 9 C3' U B1757 -39.266 1.325 95.683 1.00 61.89 C
ATOM 10 O3' U B1757 -38.123 2.146 95.806 1.00 61.47 O
ATOM 11 C2' U B1757 -39.093 -0.066 96.287 1.00 62.35 C
ATOM 12 O2' U B1757 -38.407 0.022 97.523 1.00 62.36 O
ATOM 13 C1' U B1757 -40.550 -0.472 96.558 1.00 62.78 C
ATOM 14 N1 U B1757 -41.103 -1.364 95.500 1.00 63.04 N
ATOM 15 C2 U B1757 -40.934 -2.719 95.665 1.00 63.48 C
ATOM 16 O2 U B1757 -40.368 -3.206 96.613 1.00 63.66 O
ATOM 17 N3 U B1757 -41.440 -3.511 94.682 1.00 63.74 N
ATOM 18 C4 U B1757 -42.113 -3.125 93.561 1.00 63.62 C
ATOM 19 O4 U B1757 -42.506 -4.008 92.807 1.00 63.94 O
ATOM 20 C5 U B1757 -42.281 -1.717 93.431 1.00 63.17 C
ATOM 21 C6 U B1757 -41.788 -0.908 94.385 1.00 62.91 C
ATOM 22 P A B1758 -37.027 2.178 94.634 1.00 59.18 P
ATOM 23 OP1 A B1758 -36.010 3.195 95.008 1.00 58.79 O
ATOM 24 OP2 A B1758 -37.780 2.334 93.350 1.00 59.12 O
ATOM 25 O5' A B1758 -36.373 0.732 94.733 1.00 59.48 O
TER
Atoms:
OP1: (-42.540,-1.155,109.293)
OP2: (-42.063,1.150,108.358)
C3': (-41.595,-2.378,104.567)
C1': (-43.140,-1.450,103.090)
C5': (-43.116,-2.066,106.612)
O4': (-43.779,-1.601,104.343)
C8: (-42.632,0.805,104.005)
O2': (-42.331,-3.651,102.679)
C6: (-41.829,2.838,101.251)
C5: (-42.171,1.894,102.235)
C4: (-42.480,0.619,101.810)
P: (-42.814,-0.092,108.284)
C4': (-42.984,-2.473,105.175)
C2': (-41.917,-2.362,103.094)
C2: (-42.149,1.151,99.731)
N1: (-41.822,2.433,99.966)
N3: (-42.493,0.167,100.562)
N6: (-41.526,4.090,101.557)
N7: (-42.263,1.990,103.623)
N9: (-42.761,-0.050,102.953)
O5': (-42.740,-0.714,106.821)
O3': (-40.769,-3.454,104.941)
OP2: (-42.063,1.150,108.358)
C3': (-41.595,-2.378,104.567)
C1': (-43.140,-1.450,103.090)
C5': (-43.116,-2.066,106.612)
O4': (-43.779,-1.601,104.343)
C8: (-42.632,0.805,104.005)
O2': (-42.331,-3.651,102.679)
C6: (-41.829,2.838,101.251)
C5: (-42.171,1.894,102.235)
C4: (-42.480,0.619,101.810)
P: (-42.814,-0.092,108.284)
C4': (-42.984,-2.473,105.175)
C2': (-41.917,-2.362,103.094)
C2: (-42.149,1.151,99.731)
N1: (-41.822,2.433,99.966)
N3: (-42.493,0.167,100.562)
N6: (-41.526,4.090,101.557)
N7: (-42.263,1.990,103.623)
N9: (-42.761,-0.050,102.953)
O5': (-42.740,-0.714,106.821)
O3': (-40.769,-3.454,104.941)
C4: (-42.113,-3.125,93.561)
N3: (-41.440,-3.511,94.682)
OP1: (-42.288,4.865,93.327)
OP2: (-43.071,2.643,92.444)
C2: (-40.934,-2.719,95.665)
C1': (-40.550,-0.472,96.558)
C3': (-39.266,1.325,95.683)
O5': (-41.462,2.722,94.365)
O4': (-41.326,0.709,96.610)
C5': (-41.230,2.988,95.747)
P: (-42.634,3.462,93.576)
C4': (-40.468,1.871,96.430)
C2': (-39.093,-0.066,96.287)
O2': (-38.407,0.022,97.523)
N1: (-41.103,-1.364,95.500)
O4: (-42.506,-4.008,92.807)
O2: (-40.368,-3.206,96.613)
C6: (-41.788,-0.908,94.385)
C5: (-42.281,-1.717,93.431)
O3': (-38.123,2.146,95.806)
N3: (-41.440,-3.511,94.682)
OP1: (-42.288,4.865,93.327)
OP2: (-43.071,2.643,92.444)
C2: (-40.934,-2.719,95.665)
C1': (-40.550,-0.472,96.558)
C3': (-39.266,1.325,95.683)
O5': (-41.462,2.722,94.365)
O4': (-41.326,0.709,96.610)
C5': (-41.230,2.988,95.747)
P: (-42.634,3.462,93.576)
C4': (-40.468,1.871,96.430)
C2': (-39.093,-0.066,96.287)
O2': (-38.407,0.022,97.523)
N1: (-41.103,-1.364,95.500)
O4: (-42.506,-4.008,92.807)
O2: (-40.368,-3.206,96.613)
C6: (-41.788,-0.908,94.385)
C5: (-42.281,-1.717,93.431)
O3': (-38.123,2.146,95.806)
Image (generated by PyMOL):