Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2040:A2041
Extra
PDB:
ATOM 1 O3' C A2039 -27.083 107.674 192.490 1.00 0.01 O
ATOM 2 P G A2040 -27.321 108.224 191.010 1.00 0.01 P
ATOM 3 OP1 G A2040 -26.160 109.051 190.672 1.00 0.01 O
ATOM 4 OP2 G A2040 -28.671 108.846 190.960 1.00 0.01 O
ATOM 5 O5' G A2040 -27.321 106.892 190.152 1.00 0.01 O
ATOM 6 C5' G A2040 -26.262 105.951 190.238 1.00 0.01 C
ATOM 7 C4' G A2040 -26.632 104.667 189.545 1.00 0.01 C
ATOM 8 O4' G A2040 -27.786 104.093 190.197 1.00 0.01 O
ATOM 9 C3' G A2040 -27.066 104.823 188.103 1.00 0.01 C
ATOM 10 O3' G A2040 -25.984 104.869 187.195 1.00 0.01 O
ATOM 11 C2' G A2040 -28.014 103.653 187.882 1.00 0.01 C
ATOM 12 O2' G A2040 -27.299 102.476 187.580 1.00 0.01 O
ATOM 13 C1' G A2040 -28.631 103.483 189.253 1.00 0.01 C
ATOM 14 N9 G A2040 -29.971 104.078 189.371 1.00 0.01 N
ATOM 15 C8 G A2040 -30.255 105.285 189.957 1.00 0.01 C
ATOM 16 N7 G A2040 -31.531 105.535 189.997 1.00 0.01 N
ATOM 17 C5 G A2040 -32.127 104.406 189.442 1.00 0.01 C
ATOM 18 C6 G A2040 -33.485 104.087 189.226 1.00 0.01 C
ATOM 19 O6 G A2040 -34.497 104.731 189.476 1.00 0.01 O
ATOM 20 N1 G A2040 -33.670 102.867 188.636 1.00 0.01 N
ATOM 21 C2 G A2040 -32.690 102.033 188.291 1.00 0.01 C
ATOM 22 N2 G A2040 -33.156 100.922 187.739 1.00 0.01 N
ATOM 23 N3 G A2040 -31.407 102.277 188.477 1.00 0.01 N
ATOM 24 C4 G A2040 -31.188 103.484 189.056 1.00 0.01 C
ATOM 25 P G A2041 -26.271 105.328 185.706 1.00 0.01 P
ATOM 26 OP1 G A2041 -25.466 104.485 184.820 1.00 0.01 O
ATOM 27 OP2 G A2041 -26.094 106.792 185.641 1.00 0.01 O
ATOM 28 O5' G A2041 -27.803 104.956 185.565 1.00 0.01 O
TER
ATOM 1 O3' G B2040 -25.984 104.869 187.195 1.00 0.01 O
ATOM 2 P G B2041 -26.271 105.328 185.706 1.00 0.01 P
ATOM 3 OP1 G B2041 -25.466 104.485 184.820 1.00 0.01 O
ATOM 4 OP2 G B2041 -26.094 106.792 185.641 1.00 0.01 O
ATOM 5 O5' G B2041 -27.803 104.956 185.565 1.00 0.01 O
ATOM 6 C5' G B2041 -28.487 105.156 184.353 1.00 0.01 C
ATOM 7 C4' G B2041 -29.270 103.944 183.931 1.00 0.01 C
ATOM 8 O4' G B2041 -30.001 103.403 185.057 1.00 0.01 O
ATOM 9 C3' G B2041 -30.328 104.221 182.898 1.00 0.01 C
ATOM 10 O3' G B2041 -29.814 104.239 181.591 1.00 0.01 O
ATOM 11 C2' G B2041 -31.365 103.137 183.156 1.00 0.01 C
ATOM 12 O2' G B2041 -30.970 101.893 182.583 1.00 0.01 O
ATOM 13 C1' G B2041 -31.302 103.029 184.668 1.00 0.01 C
ATOM 14 N9 G B2041 -32.245 103.946 185.335 1.00 0.02 N
ATOM 15 C8 G B2041 -31.761 104.964 186.126 1.00 0.02 C
ATOM 16 N7 G B2041 -32.674 105.708 186.681 1.00 0.02 N
ATOM 17 C5 G B2041 -33.843 105.141 186.222 1.00 0.02 C
ATOM 18 C6 G B2041 -35.132 105.550 186.524 1.00 0.02 C
ATOM 19 O6 G B2041 -35.408 106.495 187.247 1.00 0.02 O
ATOM 20 N1 G B2041 -36.103 104.803 185.939 1.00 0.02 N
ATOM 21 C2 G B2041 -35.819 103.777 185.149 1.00 0.02 C
ATOM 22 N2 G B2041 -36.895 103.180 184.674 1.00 0.02 N
ATOM 23 N3 G B2041 -34.613 103.339 184.843 1.00 0.02 N
ATOM 24 C4 G B2041 -33.634 104.062 185.410 1.00 0.02 C
ATOM 25 P C B2042 -30.224 105.423 180.610 1.00 0.01 P
ATOM 26 OP1 C B2042 -29.464 105.238 179.343 1.00 0.01 O
ATOM 27 OP2 C B2042 -30.065 106.688 181.359 1.00 0.01 O
ATOM 28 O5' C B2042 -31.760 105.128 180.368 1.00 0.01 O
TER
ATOM 2 P G A2040 -27.321 108.224 191.010 1.00 0.01 P
ATOM 3 OP1 G A2040 -26.160 109.051 190.672 1.00 0.01 O
ATOM 4 OP2 G A2040 -28.671 108.846 190.960 1.00 0.01 O
ATOM 5 O5' G A2040 -27.321 106.892 190.152 1.00 0.01 O
ATOM 6 C5' G A2040 -26.262 105.951 190.238 1.00 0.01 C
ATOM 7 C4' G A2040 -26.632 104.667 189.545 1.00 0.01 C
ATOM 8 O4' G A2040 -27.786 104.093 190.197 1.00 0.01 O
ATOM 9 C3' G A2040 -27.066 104.823 188.103 1.00 0.01 C
ATOM 10 O3' G A2040 -25.984 104.869 187.195 1.00 0.01 O
ATOM 11 C2' G A2040 -28.014 103.653 187.882 1.00 0.01 C
ATOM 12 O2' G A2040 -27.299 102.476 187.580 1.00 0.01 O
ATOM 13 C1' G A2040 -28.631 103.483 189.253 1.00 0.01 C
ATOM 14 N9 G A2040 -29.971 104.078 189.371 1.00 0.01 N
ATOM 15 C8 G A2040 -30.255 105.285 189.957 1.00 0.01 C
ATOM 16 N7 G A2040 -31.531 105.535 189.997 1.00 0.01 N
ATOM 17 C5 G A2040 -32.127 104.406 189.442 1.00 0.01 C
ATOM 18 C6 G A2040 -33.485 104.087 189.226 1.00 0.01 C
ATOM 19 O6 G A2040 -34.497 104.731 189.476 1.00 0.01 O
ATOM 20 N1 G A2040 -33.670 102.867 188.636 1.00 0.01 N
ATOM 21 C2 G A2040 -32.690 102.033 188.291 1.00 0.01 C
ATOM 22 N2 G A2040 -33.156 100.922 187.739 1.00 0.01 N
ATOM 23 N3 G A2040 -31.407 102.277 188.477 1.00 0.01 N
ATOM 24 C4 G A2040 -31.188 103.484 189.056 1.00 0.01 C
ATOM 25 P G A2041 -26.271 105.328 185.706 1.00 0.01 P
ATOM 26 OP1 G A2041 -25.466 104.485 184.820 1.00 0.01 O
ATOM 27 OP2 G A2041 -26.094 106.792 185.641 1.00 0.01 O
ATOM 28 O5' G A2041 -27.803 104.956 185.565 1.00 0.01 O
TER
ATOM 1 O3' G B2040 -25.984 104.869 187.195 1.00 0.01 O
ATOM 2 P G B2041 -26.271 105.328 185.706 1.00 0.01 P
ATOM 3 OP1 G B2041 -25.466 104.485 184.820 1.00 0.01 O
ATOM 4 OP2 G B2041 -26.094 106.792 185.641 1.00 0.01 O
ATOM 5 O5' G B2041 -27.803 104.956 185.565 1.00 0.01 O
ATOM 6 C5' G B2041 -28.487 105.156 184.353 1.00 0.01 C
ATOM 7 C4' G B2041 -29.270 103.944 183.931 1.00 0.01 C
ATOM 8 O4' G B2041 -30.001 103.403 185.057 1.00 0.01 O
ATOM 9 C3' G B2041 -30.328 104.221 182.898 1.00 0.01 C
ATOM 10 O3' G B2041 -29.814 104.239 181.591 1.00 0.01 O
ATOM 11 C2' G B2041 -31.365 103.137 183.156 1.00 0.01 C
ATOM 12 O2' G B2041 -30.970 101.893 182.583 1.00 0.01 O
ATOM 13 C1' G B2041 -31.302 103.029 184.668 1.00 0.01 C
ATOM 14 N9 G B2041 -32.245 103.946 185.335 1.00 0.02 N
ATOM 15 C8 G B2041 -31.761 104.964 186.126 1.00 0.02 C
ATOM 16 N7 G B2041 -32.674 105.708 186.681 1.00 0.02 N
ATOM 17 C5 G B2041 -33.843 105.141 186.222 1.00 0.02 C
ATOM 18 C6 G B2041 -35.132 105.550 186.524 1.00 0.02 C
ATOM 19 O6 G B2041 -35.408 106.495 187.247 1.00 0.02 O
ATOM 20 N1 G B2041 -36.103 104.803 185.939 1.00 0.02 N
ATOM 21 C2 G B2041 -35.819 103.777 185.149 1.00 0.02 C
ATOM 22 N2 G B2041 -36.895 103.180 184.674 1.00 0.02 N
ATOM 23 N3 G B2041 -34.613 103.339 184.843 1.00 0.02 N
ATOM 24 C4 G B2041 -33.634 104.062 185.410 1.00 0.02 C
ATOM 25 P C B2042 -30.224 105.423 180.610 1.00 0.01 P
ATOM 26 OP1 C B2042 -29.464 105.238 179.343 1.00 0.01 O
ATOM 27 OP2 C B2042 -30.065 106.688 181.359 1.00 0.01 O
ATOM 28 O5' C B2042 -31.760 105.128 180.368 1.00 0.01 O
TER
Atoms:
OP1: (-26.160,109.051,190.672)
OP2: (-28.671,108.846,190.960)
C3': (-27.066,104.823,188.103)
C1': (-28.631,103.483,189.253)
C5': (-26.262,105.951,190.238)
O6: (-34.497,104.731,189.476)
O4': (-27.786,104.093,190.197)
C8: (-30.255,105.285,189.957)
C2: (-32.690,102.033,188.291)
C6: (-33.485,104.087,189.226)
C5: (-32.127,104.406,189.442)
C4: (-31.188,103.484,189.056)
P: (-27.321,108.224,191.010)
C4': (-26.632,104.667,189.545)
C2': (-28.014,103.653,187.882)
O2': (-27.299,102.476,187.580)
N1: (-33.670,102.867,188.636)
N2: (-33.156,100.922,187.739)
N3: (-31.407,102.277,188.477)
N7: (-31.531,105.535,189.997)
N9: (-29.971,104.078,189.371)
O5': (-27.321,106.892,190.152)
O3': (-25.984,104.869,187.195)
OP2: (-28.671,108.846,190.960)
C3': (-27.066,104.823,188.103)
C1': (-28.631,103.483,189.253)
C5': (-26.262,105.951,190.238)
O6: (-34.497,104.731,189.476)
O4': (-27.786,104.093,190.197)
C8: (-30.255,105.285,189.957)
C2: (-32.690,102.033,188.291)
C6: (-33.485,104.087,189.226)
C5: (-32.127,104.406,189.442)
C4: (-31.188,103.484,189.056)
P: (-27.321,108.224,191.010)
C4': (-26.632,104.667,189.545)
C2': (-28.014,103.653,187.882)
O2': (-27.299,102.476,187.580)
N1: (-33.670,102.867,188.636)
N2: (-33.156,100.922,187.739)
N3: (-31.407,102.277,188.477)
N7: (-31.531,105.535,189.997)
N9: (-29.971,104.078,189.371)
O5': (-27.321,106.892,190.152)
O3': (-25.984,104.869,187.195)
OP1: (-25.466,104.485,184.820)
OP2: (-26.094,106.792,185.641)
C3': (-30.328,104.221,182.898)
C1': (-31.302,103.029,184.668)
C5': (-28.487,105.156,184.353)
O6: (-35.408,106.495,187.247)
O4': (-30.001,103.403,185.057)
C8: (-31.761,104.964,186.126)
C2: (-35.819,103.777,185.149)
C6: (-35.132,105.550,186.524)
C5: (-33.843,105.141,186.222)
C4: (-33.634,104.062,185.410)
P: (-26.271,105.328,185.706)
C4': (-29.270,103.944,183.931)
C2': (-31.365,103.137,183.156)
O2': (-30.970,101.893,182.583)
N1: (-36.103,104.803,185.939)
N2: (-36.895,103.180,184.674)
N3: (-34.613,103.339,184.843)
N7: (-32.674,105.708,186.681)
N9: (-32.245,103.946,185.335)
O5': (-27.803,104.956,185.565)
O3': (-29.814,104.239,181.591)
OP2: (-26.094,106.792,185.641)
C3': (-30.328,104.221,182.898)
C1': (-31.302,103.029,184.668)
C5': (-28.487,105.156,184.353)
O6: (-35.408,106.495,187.247)
O4': (-30.001,103.403,185.057)
C8: (-31.761,104.964,186.126)
C2: (-35.819,103.777,185.149)
C6: (-35.132,105.550,186.524)
C5: (-33.843,105.141,186.222)
C4: (-33.634,104.062,185.410)
P: (-26.271,105.328,185.706)
C4': (-29.270,103.944,183.931)
C2': (-31.365,103.137,183.156)
O2': (-30.970,101.893,182.583)
N1: (-36.103,104.803,185.939)
N2: (-36.895,103.180,184.674)
N3: (-34.613,103.339,184.843)
N7: (-32.674,105.708,186.681)
N9: (-32.245,103.946,185.335)
O5': (-27.803,104.956,185.565)
O3': (-29.814,104.239,181.591)
Image (generated by PyMOL):