Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0948:0968
Extra
PDB:
ATOM 1 O3' G A 947 64.691 53.069 120.207 1.00 85.78 O
ATOM 2 P A A 948 63.222 52.517 119.821 1.00 82.89 P
ATOM 3 OP1 A A 948 62.205 53.397 120.450 1.00 83.26 O
ATOM 4 OP2 A A 948 63.179 51.059 120.085 1.00 83.92 O
ATOM 5 O5' A A 948 63.139 52.699 118.242 1.00 78.02 O
ATOM 6 C5' A A 948 63.737 51.737 117.353 1.00 69.50 C
ATOM 7 C4' A A 948 64.066 52.381 116.027 1.00 64.24 C
ATOM 8 O4' A A 948 62.847 52.874 115.409 1.00 62.69 O
ATOM 9 C3' A A 948 64.970 53.598 116.102 1.00 60.42 C
ATOM 10 O3' A A 948 66.335 53.211 116.180 1.00 57.61 O
ATOM 11 C2' A A 948 64.622 54.331 114.816 1.00 60.83 C
ATOM 12 O2' A A 948 65.240 53.758 113.683 1.00 59.43 O
ATOM 13 C1' A A 948 63.109 54.097 114.742 1.00 62.00 C
ATOM 14 N9 A A 948 62.314 55.148 115.390 1.00 63.40 N
ATOM 15 C8 A A 948 61.479 55.023 116.478 1.00 62.97 C
ATOM 16 N7 A A 948 60.913 56.147 116.843 1.00 62.54 N
ATOM 17 C5 A A 948 61.402 57.078 115.936 1.00 62.04 C
ATOM 18 C6 A A 948 61.182 58.456 115.786 1.00 61.18 C
ATOM 19 N6 A A 948 60.388 59.173 116.578 1.00 60.93 N
ATOM 20 N1 A A 948 61.816 59.084 114.779 1.00 62.28 N
ATOM 21 C2 A A 948 62.613 58.370 113.979 1.00 62.94 C
ATOM 22 N3 A A 948 62.903 57.075 114.016 1.00 62.65 N
ATOM 23 C4 A A 948 62.259 56.476 115.032 1.00 62.89 C
ATOM 24 P C A 949 67.457 54.302 116.538 1.00 55.82 P
ATOM 25 OP1 C A 949 68.610 53.619 117.169 1.00 56.01 O
ATOM 26 OP2 C A 949 66.802 55.429 117.240 1.00 56.81 O
ATOM 27 O5' C A 949 67.951 54.791 115.111 1.00 56.27 O
TER
ATOM 1 O3' C B 967 65.676 62.594 108.060 1.00 43.61 O
ATOM 2 P U B 968 64.462 61.841 107.303 1.00 44.44 P
ATOM 3 OP1 U B 968 65.036 60.878 106.331 1.00 42.85 O
ATOM 4 OP2 U B 968 63.510 62.874 106.835 1.00 44.79 O
ATOM 5 O5' U B 968 63.707 61.012 108.431 1.00 44.76 O
ATOM 6 C5' U B 968 64.316 59.863 109.041 1.00 47.10 C
ATOM 7 C4' U B 968 63.345 59.194 109.991 1.00 47.63 C
ATOM 8 O4' U B 968 62.910 60.163 110.985 1.00 47.38 O
ATOM 9 C3' U B 968 62.072 58.622 109.375 1.00 47.41 C
ATOM 10 O3' U B 968 61.681 57.490 110.134 1.00 50.00 O
ATOM 11 C2' U B 968 61.064 59.745 109.598 1.00 46.45 C
ATOM 12 O2' U B 968 59.728 59.296 109.684 1.00 44.75 O
ATOM 13 C1' U B 968 61.505 60.280 110.954 1.00 46.15 C
ATOM 14 N1 U B 968 61.145 61.688 111.166 1.00 47.07 N
ATOM 15 C2 U B 968 60.075 61.958 111.996 1.00 48.13 C
ATOM 16 O2 U B 968 59.423 61.087 112.544 1.00 48.40 O
ATOM 17 N3 U B 968 59.791 63.291 112.159 1.00 49.13 N
ATOM 18 C4 U B 968 60.450 64.357 111.586 1.00 48.86 C
ATOM 19 O4 U B 968 60.058 65.502 111.813 1.00 48.94 O
ATOM 20 C5 U B 968 61.544 63.996 110.740 1.00 48.54 C
ATOM 21 C6 U B 968 61.846 62.707 110.563 1.00 47.32 C
ATOM 22 P C B 969 61.652 56.032 109.460 1.00 52.78 P
ATOM 23 OP1 C B 969 63.057 55.560 109.371 1.00 51.62 O
ATOM 24 OP2 C B 969 60.815 56.064 108.234 1.00 51.24 O
ATOM 25 O5' C B 969 60.860 55.183 110.552 1.00 52.14 O
TER
ATOM 2 P A A 948 63.222 52.517 119.821 1.00 82.89 P
ATOM 3 OP1 A A 948 62.205 53.397 120.450 1.00 83.26 O
ATOM 4 OP2 A A 948 63.179 51.059 120.085 1.00 83.92 O
ATOM 5 O5' A A 948 63.139 52.699 118.242 1.00 78.02 O
ATOM 6 C5' A A 948 63.737 51.737 117.353 1.00 69.50 C
ATOM 7 C4' A A 948 64.066 52.381 116.027 1.00 64.24 C
ATOM 8 O4' A A 948 62.847 52.874 115.409 1.00 62.69 O
ATOM 9 C3' A A 948 64.970 53.598 116.102 1.00 60.42 C
ATOM 10 O3' A A 948 66.335 53.211 116.180 1.00 57.61 O
ATOM 11 C2' A A 948 64.622 54.331 114.816 1.00 60.83 C
ATOM 12 O2' A A 948 65.240 53.758 113.683 1.00 59.43 O
ATOM 13 C1' A A 948 63.109 54.097 114.742 1.00 62.00 C
ATOM 14 N9 A A 948 62.314 55.148 115.390 1.00 63.40 N
ATOM 15 C8 A A 948 61.479 55.023 116.478 1.00 62.97 C
ATOM 16 N7 A A 948 60.913 56.147 116.843 1.00 62.54 N
ATOM 17 C5 A A 948 61.402 57.078 115.936 1.00 62.04 C
ATOM 18 C6 A A 948 61.182 58.456 115.786 1.00 61.18 C
ATOM 19 N6 A A 948 60.388 59.173 116.578 1.00 60.93 N
ATOM 20 N1 A A 948 61.816 59.084 114.779 1.00 62.28 N
ATOM 21 C2 A A 948 62.613 58.370 113.979 1.00 62.94 C
ATOM 22 N3 A A 948 62.903 57.075 114.016 1.00 62.65 N
ATOM 23 C4 A A 948 62.259 56.476 115.032 1.00 62.89 C
ATOM 24 P C A 949 67.457 54.302 116.538 1.00 55.82 P
ATOM 25 OP1 C A 949 68.610 53.619 117.169 1.00 56.01 O
ATOM 26 OP2 C A 949 66.802 55.429 117.240 1.00 56.81 O
ATOM 27 O5' C A 949 67.951 54.791 115.111 1.00 56.27 O
TER
ATOM 1 O3' C B 967 65.676 62.594 108.060 1.00 43.61 O
ATOM 2 P U B 968 64.462 61.841 107.303 1.00 44.44 P
ATOM 3 OP1 U B 968 65.036 60.878 106.331 1.00 42.85 O
ATOM 4 OP2 U B 968 63.510 62.874 106.835 1.00 44.79 O
ATOM 5 O5' U B 968 63.707 61.012 108.431 1.00 44.76 O
ATOM 6 C5' U B 968 64.316 59.863 109.041 1.00 47.10 C
ATOM 7 C4' U B 968 63.345 59.194 109.991 1.00 47.63 C
ATOM 8 O4' U B 968 62.910 60.163 110.985 1.00 47.38 O
ATOM 9 C3' U B 968 62.072 58.622 109.375 1.00 47.41 C
ATOM 10 O3' U B 968 61.681 57.490 110.134 1.00 50.00 O
ATOM 11 C2' U B 968 61.064 59.745 109.598 1.00 46.45 C
ATOM 12 O2' U B 968 59.728 59.296 109.684 1.00 44.75 O
ATOM 13 C1' U B 968 61.505 60.280 110.954 1.00 46.15 C
ATOM 14 N1 U B 968 61.145 61.688 111.166 1.00 47.07 N
ATOM 15 C2 U B 968 60.075 61.958 111.996 1.00 48.13 C
ATOM 16 O2 U B 968 59.423 61.087 112.544 1.00 48.40 O
ATOM 17 N3 U B 968 59.791 63.291 112.159 1.00 49.13 N
ATOM 18 C4 U B 968 60.450 64.357 111.586 1.00 48.86 C
ATOM 19 O4 U B 968 60.058 65.502 111.813 1.00 48.94 O
ATOM 20 C5 U B 968 61.544 63.996 110.740 1.00 48.54 C
ATOM 21 C6 U B 968 61.846 62.707 110.563 1.00 47.32 C
ATOM 22 P C B 969 61.652 56.032 109.460 1.00 52.78 P
ATOM 23 OP1 C B 969 63.057 55.560 109.371 1.00 51.62 O
ATOM 24 OP2 C B 969 60.815 56.064 108.234 1.00 51.24 O
ATOM 25 O5' C B 969 60.860 55.183 110.552 1.00 52.14 O
TER
Atoms:
OP1: (62.205,53.397,120.450)
OP2: (63.179,51.059,120.085)
C3': (64.970,53.598,116.102)
C1': (63.109,54.097,114.742)
C5': (63.737,51.737,117.353)
O4': (62.847,52.874,115.409)
C8: (61.479,55.023,116.478)
O2': (65.240,53.758,113.683)
C6: (61.182,58.456,115.786)
C5: (61.402,57.078,115.936)
C4: (62.259,56.476,115.032)
P: (63.222,52.517,119.821)
C4': (64.066,52.381,116.027)
C2': (64.622,54.331,114.816)
C2: (62.613,58.370,113.979)
N1: (61.816,59.084,114.779)
N3: (62.903,57.075,114.016)
N6: (60.388,59.173,116.578)
N7: (60.913,56.147,116.843)
N9: (62.314,55.148,115.390)
O5': (63.139,52.699,118.242)
O3': (66.335,53.211,116.180)
OP2: (63.179,51.059,120.085)
C3': (64.970,53.598,116.102)
C1': (63.109,54.097,114.742)
C5': (63.737,51.737,117.353)
O4': (62.847,52.874,115.409)
C8: (61.479,55.023,116.478)
O2': (65.240,53.758,113.683)
C6: (61.182,58.456,115.786)
C5: (61.402,57.078,115.936)
C4: (62.259,56.476,115.032)
P: (63.222,52.517,119.821)
C4': (64.066,52.381,116.027)
C2': (64.622,54.331,114.816)
C2: (62.613,58.370,113.979)
N1: (61.816,59.084,114.779)
N3: (62.903,57.075,114.016)
N6: (60.388,59.173,116.578)
N7: (60.913,56.147,116.843)
N9: (62.314,55.148,115.390)
O5': (63.139,52.699,118.242)
O3': (66.335,53.211,116.180)
C4: (60.450,64.357,111.586)
N3: (59.791,63.291,112.159)
OP1: (65.036,60.878,106.331)
OP2: (63.510,62.874,106.835)
C2: (60.075,61.958,111.996)
C1': (61.505,60.280,110.954)
C3': (62.072,58.622,109.375)
O5': (63.707,61.012,108.431)
O4': (62.910,60.163,110.985)
C5': (64.316,59.863,109.041)
P: (64.462,61.841,107.303)
C4': (63.345,59.194,109.991)
C2': (61.064,59.745,109.598)
O2': (59.728,59.296,109.684)
N1: (61.145,61.688,111.166)
O4: (60.058,65.502,111.813)
O2: (59.423,61.087,112.544)
C6: (61.846,62.707,110.563)
C5: (61.544,63.996,110.740)
O3': (61.681,57.490,110.134)
N3: (59.791,63.291,112.159)
OP1: (65.036,60.878,106.331)
OP2: (63.510,62.874,106.835)
C2: (60.075,61.958,111.996)
C1': (61.505,60.280,110.954)
C3': (62.072,58.622,109.375)
O5': (63.707,61.012,108.431)
O4': (62.910,60.163,110.985)
C5': (64.316,59.863,109.041)
P: (64.462,61.841,107.303)
C4': (63.345,59.194,109.991)
C2': (61.064,59.745,109.598)
O2': (59.728,59.296,109.684)
N1: (61.145,61.688,111.166)
O4: (60.058,65.502,111.813)
O2: (59.423,61.087,112.544)
C6: (61.846,62.707,110.563)
C5: (61.544,63.996,110.740)
O3': (61.681,57.490,110.134)
Image (generated by PyMOL):