ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCS:0448:020

Extra

PDB:
ATOM 1 O3' A A 447 45.464 138.599 53.283 1.00 38.39 O
ATOM 2 P A A 448 44.009 137.944 53.187 1.00 39.75 P
ATOM 3 OP1 A A 448 43.314 138.109 54.479 1.00 38.88 O
ATOM 4 OP2 A A 448 44.164 136.595 52.599 1.00 39.95 O
ATOM 5 O5' A A 448 43.259 138.865 52.143 1.00 38.76 O
ATOM 6 C5' A A 448 43.681 138.904 50.788 1.00 40.08 C
ATOM 7 C4' A A 448 42.545 139.349 49.920 1.00 41.68 C
ATOM 8 O4' A A 448 41.553 138.299 49.827 1.00 43.36 O
ATOM 9 C3' A A 448 41.805 140.583 50.402 1.00 41.61 C
ATOM 10 O3' A A 448 41.372 141.266 49.255 1.00 44.07 O
ATOM 11 C2' A A 448 40.606 140.002 51.135 1.00 41.89 C
ATOM 12 O2' A A 448 39.504 140.882 51.105 1.00 41.35 O
ATOM 13 C1' A A 448 40.303 138.778 50.282 1.00 43.56 C
ATOM 14 N9 A A 448 39.654 137.683 50.995 1.00 44.05 N
ATOM 15 C8 A A 448 40.035 137.087 52.164 1.00 43.89 C
ATOM 16 N7 A A 448 39.305 136.054 52.489 1.00 46.08 N
ATOM 17 C5 A A 448 38.365 135.978 51.472 1.00 46.53 C
ATOM 18 C6 A A 448 37.314 135.082 51.215 1.00 46.51 C
ATOM 19 N6 A A 448 37.041 134.023 51.974 1.00 47.91 N
ATOM 20 N1 A A 448 36.551 135.306 50.129 1.00 45.73 N
ATOM 21 C2 A A 448 36.842 136.349 49.349 1.00 46.20 C
ATOM 22 N3 A A 448 37.812 137.246 49.471 1.00 46.31 N
ATOM 23 C4 A A 448 38.548 136.999 50.566 1.00 45.41 C
ATOM 24 P C A 449 42.262 142.455 48.678 1.00 45.67 P
ATOM 25 OP1 C A 449 41.549 143.018 47.504 1.00 46.26 O
ATOM 26 OP2 C A 449 43.665 141.975 48.543 1.00 41.40 O
ATOM 27 O5' C A 449 42.161 143.528 49.837 1.00 45.74 O
TER

ATOM 1 O3' C B 19 26.989 135.566 48.950 1.00 49.99 O
ATOM 2 P U B 20 27.927 134.570 48.108 1.00 53.67 P
ATOM 3 OP1 U B 20 27.314 134.392 46.765 1.00 52.72 O
ATOM 4 OP2 U B 20 28.189 133.382 48.960 1.00 52.09 O
ATOM 5 O5' U B 20 29.299 135.362 47.927 1.00 52.41 O
ATOM 6 C5' U B 20 29.311 136.767 47.633 1.00 50.96 C
ATOM 7 C4' U B 20 30.726 137.299 47.655 1.00 50.94 C
ATOM 8 O4' U B 20 31.250 137.229 49.006 1.00 51.70 O
ATOM 9 C3' U B 20 31.744 136.580 46.775 1.00 50.78 C
ATOM 10 O3' U B 20 32.684 137.516 46.273 1.00 49.98 O
ATOM 11 C2' U B 20 32.468 135.684 47.763 1.00 50.37 C
ATOM 12 O2' U B 20 33.781 135.371 47.347 1.00 51.05 O
ATOM 13 C1' U B 20 32.505 136.588 48.985 1.00 51.24 C
ATOM 14 N1 U B 20 32.698 135.875 50.253 1.00 52.91 N
ATOM 15 C2 U B 20 33.642 136.378 51.129 1.00 54.08 C
ATOM 16 O2 U B 20 34.282 137.399 50.905 1.00 53.86 O
ATOM 17 N3 U B 20 33.807 135.647 52.279 1.00 53.79 N
ATOM 18 C4 U B 20 33.136 134.501 52.635 1.00 52.70 C
ATOM 19 O4 U B 20 33.444 133.922 53.675 1.00 53.29 O
ATOM 20 C5 U B 20 32.164 134.061 51.688 1.00 52.61 C
ATOM 21 C6 U B 20 31.983 134.745 50.558 1.00 52.07 C
ATOM 22 P C B 21 32.541 138.044 44.771 1.00 49.66 P
ATOM 23 OP1 C B 21 32.253 139.490 44.876 1.00 51.88 O
ATOM 24 OP2 C B 21 31.606 137.171 44.052 1.00 50.76 O
ATOM 25 O5' C B 21 33.972 137.812 44.125 1.00 51.35 O
TER

Atoms:
OP1: (43.314,138.109,54.479)
OP2: (44.164,136.595,52.599)
C3': (41.805,140.583,50.402)
C1': (40.303,138.778,50.282)
C5': (43.681,138.904,50.788)
O4': (41.553,138.299,49.827)
C8: (40.035,137.087,52.164)
O2': (39.504,140.882,51.105)
C6: (37.314,135.082,51.215)
C5: (38.365,135.978,51.472)
C4: (38.548,136.999,50.566)
P: (44.009,137.944,53.187)
C4': (42.545,139.349,49.920)
C2': (40.606,140.002,51.135)
C2: (36.842,136.349,49.349)
N1: (36.551,135.306,50.129)
N3: (37.812,137.246,49.471)
N6: (37.041,134.023,51.974)
N7: (39.305,136.054,52.489)
N9: (39.654,137.683,50.995)
O5': (43.259,138.865,52.143)
O3': (41.372,141.266,49.255)
C4: (33.136,134.501,52.635)
N3: (33.807,135.647,52.279)
OP1: (27.314,134.392,46.765)
OP2: (28.189,133.382,48.960)
C2: (33.642,136.378,51.129)
C1': (32.505,136.588,48.985)
C3': (31.744,136.580,46.775)
O5': (29.299,135.362,47.927)
O4': (31.250,137.229,49.006)
C5': (29.311,136.767,47.633)
P: (27.927,134.570,48.108)
C4': (30.726,137.299,47.655)
C2': (32.468,135.684,47.763)
O2': (33.781,135.371,47.347)
N1: (32.698,135.875,50.253)
O4: (33.444,133.922,53.675)
O2: (34.282,137.399,50.905)
C6: (31.983,134.745,50.558)
C5: (32.164,134.061,51.688)
O3': (32.684,137.516,46.273)
Image (generated by PyMOL):
PyMOL image
show in jmol