ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A1907:A1908

Extra

PDB:
ATOM 1 O3' C A1906 54.535 -39.545 27.970 1.00 37.72 O
ATOM 2 P U A1907 55.023 -40.771 28.897 1.00 41.14 P
ATOM 3 OP1 U A1907 53.809 -41.467 29.355 1.00 46.89 O
ATOM 4 OP2 U A1907 55.957 -40.219 29.912 1.00 48.95 O
ATOM 5 O5' U A1907 55.825 -41.699 27.892 1.00 32.88 O
ATOM 6 C5' U A1907 55.174 -42.698 27.159 1.00 28.97 C
ATOM 7 C4' U A1907 55.951 -43.056 25.924 1.00 33.54 C
ATOM 8 O4' U A1907 56.656 -41.907 25.411 1.00 33.87 O
ATOM 9 C3' U A1907 57.026 -44.095 26.082 1.00 22.41 C
ATOM 10 O3' U A1907 56.476 -45.387 26.154 1.00 25.64 O
ATOM 11 C2' U A1907 57.872 -43.850 24.839 1.00 36.18 C
ATOM 12 O2' U A1907 57.259 -44.408 23.680 1.00 36.46 O
ATOM 13 C1' U A1907 57.803 -42.328 24.726 1.00 32.27 C
ATOM 14 N1 U A1907 58.948 -41.685 25.342 1.00 38.45 N
ATOM 15 C2 U A1907 60.041 -41.558 24.550 1.00 38.73 C
ATOM 16 O2 U A1907 59.987 -41.989 23.428 1.00 35.45 O
ATOM 17 N3 U A1907 61.127 -40.930 25.130 1.00 42.54 N
ATOM 18 C4 U A1907 61.179 -40.435 26.428 1.00 40.77 C
ATOM 19 O4 U A1907 62.177 -39.888 26.868 1.00 36.61 O
ATOM 20 C5 U A1907 59.984 -40.612 27.180 1.00 42.36 C
ATOM 21 C6 U A1907 58.924 -41.210 26.628 1.00 39.93 C
ATOM 22 P G A1908 57.390 -46.660 26.433 1.00 26.11 P
ATOM 23 OP1 G A1908 56.503 -47.825 26.572 1.00 32.39 O
ATOM 24 OP2 G A1908 58.306 -46.314 27.553 1.00 42.26 O
ATOM 25 O5' G A1908 58.184 -46.784 25.089 1.00 30.89 O
TER

ATOM 1 O3' U B1907 56.476 -45.387 26.154 1.00 25.64 O
ATOM 2 P G B1908 57.390 -46.660 26.433 1.00 26.11 P
ATOM 3 OP1 G B1908 56.503 -47.825 26.572 1.00 32.39 O
ATOM 4 OP2 G B1908 58.306 -46.314 27.553 1.00 42.26 O
ATOM 5 O5' G B1908 58.184 -46.784 25.089 1.00 30.89 O
ATOM 6 C5' G B1908 59.587 -46.886 25.086 1.00 44.96 C
ATOM 7 C4' G B1908 60.004 -47.713 23.944 1.00 34.27 C
ATOM 8 O4' G B1908 60.674 -48.869 24.467 1.00 38.30 O
ATOM 9 C3' G B1908 58.837 -48.197 23.150 1.00 34.94 C
ATOM 10 O3' G B1908 59.007 -47.922 21.710 1.00 39.61 O
ATOM 11 C2' G B1908 58.630 -49.684 23.592 1.00 26.86 C
ATOM 12 O2' G B1908 58.463 -50.622 22.570 1.00 41.52 O
ATOM 13 C1' G B1908 59.864 -50.010 24.425 1.00 29.51 C
ATOM 14 N9 G B1908 59.580 -50.355 25.816 1.00 29.76 N
ATOM 15 C8 G B1908 58.493 -49.989 26.554 1.00 34.39 C
ATOM 16 N7 G B1908 58.553 -50.417 27.796 1.00 35.77 N
ATOM 17 C5 G B1908 59.767 -51.092 27.909 1.00 31.38 C
ATOM 18 C6 G B1908 60.393 -51.766 29.024 1.00 32.13 C
ATOM 19 O6 G B1908 60.002 -51.905 30.196 1.00 29.48 O
ATOM 20 N1 G B1908 61.637 -52.312 28.700 1.00 28.75 N
ATOM 21 C2 G B1908 62.210 -52.193 27.473 1.00 28.59 C
ATOM 22 N2 G B1908 63.394 -52.766 27.361 1.00 30.50 N
ATOM 23 N3 G B1908 61.661 -51.570 26.434 1.00 31.41 N
ATOM 24 C4 G B1908 60.428 -51.036 26.696 1.00 31.37 C
ATOM 25 P U B1909 59.945 -48.776 20.714 1.00 25.30 P
ATOM 26 OP1 U B1909 59.207 -48.918 19.437 1.00 27.40 O
ATOM 27 OP2 U B1909 60.348 -50.007 21.442 1.00 43.00 O
ATOM 28 O5' U B1909 61.217 -47.853 20.463 1.00 37.09 O
TER

Atoms:
C4: (61.179,-40.435,26.428)
N3: (61.127,-40.930,25.130)
OP1: (53.809,-41.467,29.355)
OP2: (55.957,-40.219,29.912)
C2: (60.041,-41.558,24.550)
C1': (57.803,-42.328,24.726)
C3': (57.026,-44.095,26.082)
O5': (55.825,-41.699,27.892)
O4': (56.656,-41.907,25.411)
C5': (55.174,-42.698,27.159)
P: (55.023,-40.771,28.897)
C4': (55.951,-43.056,25.924)
C2': (57.872,-43.850,24.839)
O2': (57.259,-44.408,23.680)
N1: (58.948,-41.685,25.342)
O4: (62.177,-39.888,26.868)
O2: (59.987,-41.989,23.428)
C6: (58.924,-41.210,26.628)
C5: (59.984,-40.612,27.180)
O3': (56.476,-45.387,26.154)
OP1: (56.503,-47.825,26.572)
OP2: (58.306,-46.314,27.553)
C3': (58.837,-48.197,23.150)
C1': (59.864,-50.010,24.425)
C5': (59.587,-46.886,25.086)
O6: (60.002,-51.905,30.196)
O4': (60.674,-48.869,24.467)
C8: (58.493,-49.989,26.554)
C2: (62.210,-52.193,27.473)
C6: (60.393,-51.766,29.024)
C5: (59.767,-51.092,27.909)
C4: (60.428,-51.036,26.696)
P: (57.390,-46.660,26.433)
C4': (60.004,-47.713,23.944)
C2': (58.630,-49.684,23.592)
O2': (58.463,-50.622,22.570)
N1: (61.637,-52.312,28.700)
N2: (63.394,-52.766,27.361)
N3: (61.661,-51.570,26.434)
N7: (58.553,-50.417,27.796)
N9: (59.580,-50.355,25.816)
O5': (58.184,-46.784,25.089)
O3': (59.007,-47.922,21.710)
Image (generated by PyMOL):
PyMOL image
show in jmol