ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OVS:D16:D18

Extra

PDB:
ATOM 1 O3' A A 15 -36.498 19.358 -31.224 1.00 84.46 O
ATOM 2 P A A 16 -37.496 18.327 -30.525 1.00 86.61 P
ATOM 3 OP1 A A 16 -38.636 18.223 -31.464 1.00 90.08 O
ATOM 4 OP2 A A 16 -37.736 18.746 -29.127 1.00 81.75 O
ATOM 5 O5' A A 16 -36.691 16.935 -30.477 1.00 91.06 O
ATOM 6 C5' A A 16 -35.342 16.845 -29.996 1.00 94.81 C
ATOM 7 C4' A A 16 -35.045 15.577 -29.209 1.00 97.76 C
ATOM 8 O4' A A 16 -34.607 15.944 -27.875 1.00 94.58 O
ATOM 9 C3' A A 16 -36.208 14.596 -29.025 1.00100.34 C
ATOM 10 O3' A A 16 -35.833 13.207 -29.139 1.00106.25 O
ATOM 11 C2' A A 16 -36.687 14.892 -27.607 1.00 94.94 C
ATOM 12 O2' A A 16 -37.317 13.779 -27.002 1.00 93.36 O
ATOM 13 C1' A A 16 -35.365 15.225 -26.916 1.00 93.25 C
ATOM 14 N9 A A 16 -35.480 16.050 -25.712 1.00 89.45 N
ATOM 15 C8 A A 16 -36.539 16.841 -25.346 1.00 87.50 C
ATOM 16 N7 A A 16 -36.368 17.476 -24.211 1.00 84.80 N
ATOM 17 C5 A A 16 -35.106 17.074 -23.801 1.00 84.95 C
ATOM 18 C6 A A 16 -34.334 17.393 -22.666 1.00 82.82 C
ATOM 19 N6 A A 16 -34.769 18.225 -21.720 1.00 80.56 N
ATOM 20 N1 A A 16 -33.109 16.826 -22.545 1.00 84.15 N
ATOM 21 C2 A A 16 -32.684 15.993 -23.504 1.00 86.94 C
ATOM 22 N3 A A 16 -33.320 15.615 -24.615 1.00 89.15 N
ATOM 23 C4 A A 16 -34.538 16.195 -24.711 1.00 87.87 C
ATOM 24 P G A 17 -34.606 12.631 -30.011 1.00114.03 P
ATOM 25 OP1 G A 17 -33.426 12.557 -29.113 1.00112.04 O
ATOM 26 OP2 G A 17 -34.508 13.380 -31.293 1.00116.92 O
ATOM 27 O5' G A 17 -35.096 11.134 -30.345 1.00117.94 O
TER

ATOM 1 O3' G B 17 -34.633 9.208 -26.567 1.00110.02 O
ATOM 2 P U B 18 -34.446 10.276 -25.380 1.00104.58 P
ATOM 3 OP1 U B 18 -35.001 9.651 -24.159 1.00100.92 O
ATOM 4 OP2 U B 18 -34.987 11.576 -25.845 1.00103.72 O
ATOM 5 O5' U B 18 -32.851 10.437 -25.236 1.00104.76 O
ATOM 6 C5' U B 18 -32.113 9.699 -24.258 1.00102.26 C
ATOM 7 C4' U B 18 -30.929 10.487 -23.716 1.00100.50 C
ATOM 8 O4' U B 18 -30.017 10.832 -24.788 1.00104.72 O
ATOM 9 C3' U B 18 -31.266 11.792 -22.996 1.00 95.86 C
ATOM 10 O3' U B 18 -30.529 11.843 -21.774 1.00 93.44 O
ATOM 11 C2' U B 18 -30.840 12.888 -23.976 1.00 97.74 C
ATOM 12 O2' U B 18 -30.390 14.063 -23.326 1.00 94.85 O
ATOM 13 C1' U B 18 -29.693 12.207 -24.723 1.00103.13 C
ATOM 14 N1 U B 18 -29.462 12.702 -26.120 1.00107.02 N
ATOM 15 C2 U B 18 -28.704 13.849 -26.334 1.00108.15 C
ATOM 16 O2 U B 18 -28.200 14.513 -25.442 1.00106.24 O
ATOM 17 N3 U B 18 -28.551 14.207 -27.659 1.00111.88 N
ATOM 18 C4 U B 18 -29.065 13.550 -28.768 1.00115.03 C
ATOM 19 O4 U B 18 -28.843 13.992 -29.890 1.00118.57 O
ATOM 20 C5 U B 18 -29.839 12.368 -28.468 1.00114.51 C
ATOM 21 C6 U B 18 -30.005 11.997 -27.187 1.00110.39 C
ATOM 22 P C B 19 -31.131 11.295 -20.386 1.00 89.72 P
ATOM 23 OP1 C B 19 -29.975 11.085 -19.484 1.00 90.87 O
ATOM 24 OP2 C B 19 -32.071 10.164 -20.625 1.00 88.88 O
ATOM 25 O5' C B 19 -31.973 12.563 -19.876 1.00 83.61 O
TER

Atoms:
OP1: (-38.636,18.223,-31.464)
OP2: (-37.736,18.746,-29.127)
C3': (-36.208,14.596,-29.025)
C1': (-35.365,15.225,-26.916)
C5': (-35.342,16.845,-29.996)
O4': (-34.607,15.944,-27.875)
C8: (-36.539,16.841,-25.346)
O2': (-37.317,13.779,-27.002)
C6: (-34.334,17.393,-22.666)
C5: (-35.106,17.074,-23.801)
C4: (-34.538,16.195,-24.711)
P: (-37.496,18.327,-30.525)
C4': (-35.045,15.577,-29.209)
C2': (-36.687,14.892,-27.607)
C2: (-32.684,15.993,-23.504)
N1: (-33.109,16.826,-22.545)
N3: (-33.320,15.615,-24.615)
N6: (-34.769,18.225,-21.720)
N7: (-36.368,17.476,-24.211)
N9: (-35.480,16.050,-25.712)
O5': (-36.691,16.935,-30.477)
O3': (-35.833,13.207,-29.139)
C4: (-29.065,13.550,-28.768)
N3: (-28.551,14.207,-27.659)
OP1: (-35.001,9.651,-24.159)
OP2: (-34.987,11.576,-25.845)
C2: (-28.704,13.849,-26.334)
C1': (-29.693,12.207,-24.723)
C3': (-31.266,11.792,-22.996)
O5': (-32.851,10.437,-25.236)
O4': (-30.017,10.832,-24.788)
C5': (-32.113,9.699,-24.258)
P: (-34.446,10.276,-25.380)
C4': (-30.929,10.487,-23.716)
C2': (-30.840,12.888,-23.976)
O2': (-30.390,14.063,-23.326)
N1: (-29.462,12.702,-26.120)
O4: (-28.843,13.992,-29.890)
O2: (-28.200,14.513,-25.442)
C6: (-30.005,11.997,-27.187)
C5: (-29.839,12.368,-28.468)
O3': (-30.529,11.843,-21.774)
Image (generated by PyMOL):
PyMOL image
show in jmol