ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A745:A1478

Extra

PDB:
ATOM 1 O3' A A 744 174.493 99.956 -52.186 1.00 36.21 O
ATOM 2 P A A 745 175.272 98.655 -52.726 1.00 47.86 P
ATOM 3 OP1 A A 745 175.972 99.056 -53.986 1.00 31.81 O
ATOM 4 OP2 A A 745 174.327 97.507 -52.749 1.00 31.81 O
ATOM 5 O5' A A 745 176.357 98.362 -51.592 1.00 47.86 O
ATOM 6 C5' A A 745 177.448 99.275 -51.357 1.00 47.86 C
ATOM 7 C4' A A 745 178.249 98.843 -50.155 1.00 47.86 C
ATOM 8 O4' A A 745 177.428 98.930 -48.962 1.00 47.86 O
ATOM 9 C3' A A 745 178.742 97.408 -50.173 1.00 47.86 C
ATOM 10 O3' A A 745 179.944 97.299 -50.911 1.00 47.86 O
ATOM 11 C2' A A 745 178.930 97.110 -48.691 1.00 47.86 C
ATOM 12 O2' A A 745 180.134 97.648 -48.190 1.00 47.86 O
ATOM 13 C1' A A 745 177.755 97.872 -48.072 1.00 47.86 C
ATOM 14 N9 A A 745 176.584 97.003 -47.946 1.00 31.81 N
ATOM 15 C8 A A 745 175.520 96.917 -48.806 1.00 31.81 C
ATOM 16 N7 A A 745 174.668 95.969 -48.497 1.00 31.81 N
ATOM 17 C5 A A 745 175.191 95.416 -47.342 1.00 31.81 C
ATOM 18 C6 A A 745 174.760 94.374 -46.536 1.00 31.81 C
ATOM 19 N6 A A 745 173.672 93.665 -46.783 1.00 31.81 N
ATOM 20 N1 A A 745 175.496 94.071 -45.452 1.00 31.81 N
ATOM 21 C2 A A 745 176.604 94.779 -45.218 1.00 31.81 C
ATOM 22 N3 A A 745 177.121 95.781 -45.914 1.00 31.81 N
ATOM 23 C4 A A 745 176.357 96.057 -46.977 1.00 31.81 C
ATOM 24 P A A 746 180.220 95.990 -51.809 1.00 35.11 P
ATOM 25 OP1 A A 746 181.466 96.312 -52.559 1.00 38.14 O
ATOM 26 OP2 A A 746 178.991 95.632 -52.567 1.00 38.14 O
ATOM 27 O5' A A 746 180.496 94.845 -50.730 1.00 35.11 O
TER

ATOM 1 O3' G B1477 175.428 92.974 -39.387 1.00 38.05 O
ATOM 2 P U B1478 176.282 91.648 -39.124 1.00 41.65 P
ATOM 3 OP1 U B1478 175.367 90.481 -38.966 1.00 39.56 O
ATOM 4 OP2 U B1478 177.266 91.955 -38.052 1.00 39.56 O
ATOM 5 O5' U B1478 177.092 91.460 -40.481 1.00 41.65 O
ATOM 6 C5' U B1478 176.408 91.277 -41.725 1.00 41.65 C
ATOM 7 C4' U B1478 177.393 91.299 -42.862 1.00 41.65 C
ATOM 8 O4' U B1478 178.002 92.608 -42.934 1.00 41.65 O
ATOM 9 C3' U B1478 178.566 90.335 -42.759 1.00 41.65 C
ATOM 10 O3' U B1478 178.209 89.064 -43.279 1.00 41.65 O
ATOM 11 C2' U B1478 179.628 91.010 -43.619 1.00 41.65 C
ATOM 12 O2' U B1478 179.443 90.753 -44.995 1.00 41.65 O
ATOM 13 C1' U B1478 179.345 92.489 -43.356 1.00 41.65 C
ATOM 14 N1 U B1478 180.208 93.063 -42.315 1.00 39.56 N
ATOM 15 C2 U B1478 181.392 93.628 -42.717 1.00 39.56 C
ATOM 16 O2 U B1478 181.745 93.665 -43.872 1.00 39.56 O
ATOM 17 N3 U B1478 182.154 94.145 -41.714 1.00 39.56 N
ATOM 18 C4 U B1478 181.866 94.149 -40.382 1.00 39.56 C
ATOM 19 O4 U B1478 182.656 94.670 -39.607 1.00 39.56 O
ATOM 20 C5 U B1478 180.625 93.544 -40.035 1.00 39.56 C
ATOM 21 C6 U B1478 179.855 93.036 -40.989 1.00 39.56 C
ATOM 22 P A B1479 179.054 87.762 -42.868 1.00 38.52 P
ATOM 23 OP1 A B1479 178.427 86.654 -43.630 1.00 50.58 O
ATOM 24 OP2 A B1479 179.187 87.663 -41.388 1.00 50.58 O
ATOM 25 O5' A B1479 180.486 88.031 -43.497 1.00 38.52 O
TER

Atoms:
OP1: (175.972,99.056,-53.986)
OP2: (174.327,97.507,-52.749)
C3': (178.742,97.408,-50.173)
C1': (177.755,97.872,-48.072)
C5': (177.448,99.275,-51.357)
O4': (177.428,98.930,-48.962)
C8: (175.520,96.917,-48.806)
O2': (180.134,97.648,-48.190)
C6: (174.760,94.374,-46.536)
C5: (175.191,95.416,-47.342)
C4: (176.357,96.057,-46.977)
P: (175.272,98.655,-52.726)
C4': (178.249,98.843,-50.155)
C2': (178.930,97.110,-48.691)
C2: (176.604,94.779,-45.218)
N1: (175.496,94.071,-45.452)
N3: (177.121,95.781,-45.914)
N6: (173.672,93.665,-46.783)
N7: (174.668,95.969,-48.497)
N9: (176.584,97.003,-47.946)
O5': (176.357,98.362,-51.592)
O3': (179.944,97.299,-50.911)
C4: (181.866,94.149,-40.382)
N3: (182.154,94.145,-41.714)
OP1: (175.367,90.481,-38.966)
OP2: (177.266,91.955,-38.052)
C2: (181.392,93.628,-42.717)
C1': (179.345,92.489,-43.356)
C3': (178.566,90.335,-42.759)
O5': (177.092,91.460,-40.481)
O4': (178.002,92.608,-42.934)
C5': (176.408,91.277,-41.725)
P: (176.282,91.648,-39.124)
C4': (177.393,91.299,-42.862)
C2': (179.628,91.010,-43.619)
O2': (179.443,90.753,-44.995)
N1: (180.208,93.063,-42.315)
O4: (182.656,94.670,-39.607)
O2: (181.745,93.665,-43.872)
C6: (179.855,93.036,-40.989)
C5: (180.625,93.544,-40.035)
O3': (178.209,89.064,-43.279)
Image (generated by PyMOL):
PyMOL image
show in jmol