ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5F:61416:61283

Extra

PDB:
ATOM 1 O3' A A1415 264.454 -25.646 260.962 1.00 70.71 O
ATOM 2 P A A1416 263.177 -24.746 260.670 1.00 71.94 P
ATOM 3 OP1 A A1416 262.738 -24.181 261.979 1.00 71.96 O
ATOM 4 OP2 A A1416 262.218 -25.579 259.869 1.00 71.61 O
ATOM 5 O5' A A1416 263.808 -23.593 259.783 1.00 72.04 O
ATOM 6 C5' A A1416 265.032 -22.989 260.184 1.00 72.44 C
ATOM 7 C4' A A1416 265.518 -22.015 259.159 1.00 72.50 C
ATOM 8 O4' A A1416 265.523 -22.658 257.872 1.00 72.40 O
ATOM 9 C3' A A1416 264.647 -20.784 258.957 1.00 72.21 C
ATOM 10 O3' A A1416 264.909 -19.758 259.898 1.00 72.40 O
ATOM 11 C2' A A1416 264.928 -20.380 257.514 1.00 72.17 C
ATOM 12 O2' A A1416 266.136 -19.624 257.428 1.00 72.55 O
ATOM 13 C1' A A1416 265.163 -21.739 256.863 1.00 72.20 C
ATOM 14 N9 A A1416 263.983 -22.266 256.152 1.00 71.78 N
ATOM 15 C8 A A1416 263.382 -23.477 256.394 1.00 71.64 C
ATOM 16 N7 A A1416 262.398 -23.771 255.577 1.00 71.31 N
ATOM 17 C5 A A1416 262.368 -22.688 254.729 1.00 71.23 C
ATOM 18 C6 A A1416 261.538 -22.391 253.656 1.00 70.94 C
ATOM 19 N6 A A1416 260.570 -23.180 253.235 1.00 70.68 N
ATOM 20 N1 A A1416 261.734 -21.237 253.024 1.00 70.93 N
ATOM 21 C2 A A1416 262.717 -20.450 253.460 1.00 71.21 C
ATOM 22 N3 A A1416 263.570 -20.608 254.465 1.00 71.53 N
ATOM 23 C4 A A1416 263.338 -21.765 255.065 1.00 71.51 C
ATOM 24 P U A1417 263.678 -19.015 260.617 1.00 81.39 P
ATOM 25 OP1 U A1417 264.242 -18.187 261.720 1.00 81.72 O
ATOM 26 OP2 U A1417 262.683 -20.060 260.947 1.00 81.13 O
ATOM 27 O5' U A1417 263.117 -18.073 259.463 1.00 81.11 O
TER

ATOM 1 O3' G B1282 261.170 -18.683 248.138 1.00 64.82 O
ATOM 2 P U B1283 261.784 -17.204 247.995 1.00 62.41 P
ATOM 3 OP1 U B1283 260.627 -16.287 247.965 1.00 62.07 O
ATOM 4 OP2 U B1283 262.707 -17.228 246.832 1.00 62.66 O
ATOM 5 O5' U B1283 262.595 -16.995 249.357 1.00 62.68 O
ATOM 6 C5' U B1283 261.914 -16.618 250.543 1.00 62.53 C
ATOM 7 C4' U B1283 262.849 -16.422 251.707 1.00 62.86 C
ATOM 8 O4' U B1283 263.714 -17.579 251.866 1.00 63.14 O
ATOM 9 C3' U B1283 263.835 -15.289 251.587 1.00 63.15 C
ATOM 10 O3' U B1283 263.263 -14.003 251.747 1.00 62.98 O
ATOM 11 C2' U B1283 264.872 -15.656 252.642 1.00 63.54 C
ATOM 12 O2' U B1283 264.392 -15.401 253.956 1.00 63.49 O
ATOM 13 C1' U B1283 264.954 -17.168 252.434 1.00 63.56 C
ATOM 14 N1 U B1283 266.060 -17.506 251.500 1.00 63.88 N
ATOM 15 C2 U B1283 267.323 -17.396 252.026 1.00 64.35 C
ATOM 16 O2 U B1283 267.476 -17.103 253.207 1.00 64.46 O
ATOM 17 N3 U B1283 268.346 -17.645 251.136 1.00 64.69 N
ATOM 18 C4 U B1283 268.233 -17.984 249.795 1.00 64.62 C
ATOM 19 O4 U B1283 269.219 -18.196 249.065 1.00 64.99 O
ATOM 20 C5 U B1283 266.890 -18.061 249.350 1.00 64.11 C
ATOM 21 C6 U B1283 265.880 -17.803 250.177 1.00 63.78 C
ATOM 22 P U B1284 263.813 -12.785 250.839 1.00 67.90 P
ATOM 23 OP1 U B1284 262.813 -11.697 250.920 1.00 67.62 O
ATOM 24 OP2 U B1284 264.158 -13.354 249.492 1.00 67.93 O
ATOM 25 O5' U B1284 265.153 -12.359 251.593 1.00 68.38 O
TER

Atoms:
OP1: (262.738,-24.181,261.979)
OP2: (262.218,-25.579,259.869)
C3': (264.647,-20.784,258.957)
C1': (265.163,-21.739,256.863)
C5': (265.032,-22.989,260.184)
O4': (265.523,-22.658,257.872)
C8: (263.382,-23.477,256.394)
O2': (266.136,-19.624,257.428)
C6: (261.538,-22.391,253.656)
C5: (262.368,-22.688,254.729)
C4: (263.338,-21.765,255.065)
P: (263.177,-24.746,260.670)
C4': (265.518,-22.015,259.159)
C2': (264.928,-20.380,257.514)
C2: (262.717,-20.450,253.460)
N1: (261.734,-21.237,253.024)
N3: (263.570,-20.608,254.465)
N6: (260.570,-23.180,253.235)
N7: (262.398,-23.771,255.577)
N9: (263.983,-22.266,256.152)
O5': (263.808,-23.593,259.783)
O3': (264.909,-19.758,259.898)
C4: (268.233,-17.984,249.795)
N3: (268.346,-17.645,251.136)
OP1: (260.627,-16.287,247.965)
OP2: (262.707,-17.228,246.832)
C2: (267.323,-17.396,252.026)
C1': (264.954,-17.168,252.434)
C3': (263.835,-15.289,251.587)
O5': (262.595,-16.995,249.357)
O4': (263.714,-17.579,251.866)
C5': (261.914,-16.618,250.543)
P: (261.784,-17.204,247.995)
C4': (262.849,-16.422,251.707)
C2': (264.872,-15.656,252.642)
O2': (264.392,-15.401,253.956)
N1: (266.060,-17.506,251.500)
O4: (269.219,-18.196,249.065)
O2: (267.476,-17.103,253.207)
C6: (265.880,-17.803,250.177)
C5: (266.890,-18.061,249.350)
O3': (263.263,-14.003,251.747)
Image (generated by PyMOL):
PyMOL image
show in jmol