ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:B41:B42

Extra

PDB:
ATOM 1 O3' C A 40 94.229 23.298 92.672 1.00 89.31 O
ATOM 2 P C A 41 93.054 22.234 92.398 1.00 90.30 P
ATOM 3 OP1 C A 41 93.550 21.252 91.395 1.00 90.41 O
ATOM 4 OP2 C A 41 91.808 22.997 92.128 1.00 90.45 O
ATOM 5 O5' C A 41 92.914 21.463 93.788 1.00 90.98 O
ATOM 6 C5' C A 41 91.732 20.712 94.114 1.00 90.98 C
ATOM 7 C4' C A 41 91.639 20.479 95.611 1.00 92.05 C
ATOM 8 O4' C A 41 91.861 21.721 96.333 1.00 93.64 O
ATOM 9 C3' C A 41 90.254 20.032 96.044 1.00 92.31 C
ATOM 10 O3' C A 41 90.080 18.632 95.895 1.00 90.50 O
ATOM 11 C2' C A 41 90.164 20.506 97.487 1.00 93.92 C
ATOM 12 O2' C A 41 90.740 19.616 98.428 1.00 95.85 O
ATOM 13 C1' C A 41 90.945 21.823 97.419 1.00 95.11 C
ATOM 14 N1 C A 41 90.091 23.009 97.189 1.00 97.08 N
ATOM 15 C2 C A 41 89.064 23.324 98.117 1.00 97.92 C
ATOM 16 O2 C A 41 88.871 22.576 99.088 1.00 98.66 O
ATOM 17 N3 C A 41 88.315 24.434 97.917 1.00 98.46 N
ATOM 18 C4 C A 41 88.542 25.206 96.848 1.00 98.73 C
ATOM 19 N4 C A 41 87.791 26.301 96.697 1.00 98.90 N
ATOM 20 C5 C A 41 89.554 24.894 95.885 1.00 98.08 C
ATOM 21 C6 C A 41 90.295 23.804 96.094 1.00 97.70 C
ATOM 22 P G A 42 89.346 18.071 94.584 1.00 89.46 P
ATOM 23 OP1 G A 42 89.213 16.598 94.679 1.00 90.09 O
ATOM 24 OP2 G A 42 89.993 18.672 93.382 1.00 88.50 O
ATOM 25 O5' G A 42 87.881 18.654 94.717 1.00 87.53 O
TER

ATOM 1 O3' C B 41 90.080 18.632 95.895 1.00 90.50 O
ATOM 2 P G B 42 89.346 18.071 94.584 1.00 89.46 P
ATOM 3 OP1 G B 42 89.213 16.598 94.679 1.00 90.09 O
ATOM 4 OP2 G B 42 89.993 18.672 93.382 1.00 88.50 O
ATOM 5 O5' G B 42 87.881 18.654 94.717 1.00 87.53 O
ATOM 6 C5' G B 42 86.857 18.184 93.868 1.00 85.27 C
ATOM 7 C4' G B 42 85.562 18.149 94.618 1.00 84.06 C
ATOM 8 O4' G B 42 84.511 17.708 93.745 1.00 83.87 O
ATOM 9 C3' G B 42 85.482 17.181 95.777 1.00 83.56 C
ATOM 10 O3' G B 42 84.410 17.620 96.583 1.00 82.74 O
ATOM 11 C2' G B 42 85.158 15.860 95.091 1.00 84.26 C
ATOM 12 O2' G B 42 84.419 14.980 95.916 1.00 83.92 O
ATOM 13 C1' G B 42 84.304 16.323 93.914 1.00 84.63 C
ATOM 14 N9 G B 42 84.641 15.703 92.640 1.00 85.64 N
ATOM 15 C8 G B 42 85.360 14.552 92.391 1.00 86.29 C
ATOM 16 N7 G B 42 85.409 14.248 91.122 1.00 86.10 N
ATOM 17 C5 G B 42 84.687 15.262 90.504 1.00 85.65 C
ATOM 18 C6 G B 42 84.355 15.457 89.144 1.00 85.21 C
ATOM 19 O6 G B 42 84.610 14.732 88.182 1.00 84.69 O
ATOM 20 N1 G B 42 83.625 16.628 88.958 1.00 85.11 N
ATOM 21 C2 G B 42 83.249 17.492 89.957 1.00 84.87 C
ATOM 22 N2 G B 42 82.546 18.566 89.590 1.00 85.36 N
ATOM 23 N3 G B 42 83.535 17.313 91.226 1.00 85.25 N
ATOM 24 C4 G B 42 84.244 16.182 91.427 1.00 85.88 C
ATOM 25 P A B 43 84.376 17.223 98.123 1.00 82.50 P
ATOM 26 OP1 A B 43 85.764 16.864 98.527 1.00 82.76 O
ATOM 27 OP2 A B 43 83.282 16.242 98.301 1.00 82.31 O
ATOM 28 O5' A B 43 83.982 18.581 98.846 1.00 82.66 O
TER

Atoms:
C2: (89.064,23.324,98.117)
OP1: (93.550,21.252,91.395)
OP2: (91.808,22.997,92.128)
C4: (88.542,25.206,96.848)
O5': (92.914,21.463,93.788)
C3': (90.254,20.032,96.044)
C1': (90.945,21.823,97.419)
O4': (91.861,21.721,96.333)
C5': (91.732,20.712,94.114)
P: (93.054,22.234,92.398)
O2: (88.871,22.576,99.088)
C4': (91.639,20.479,95.611)
C2': (90.164,20.506,97.487)
O2': (90.740,19.616,98.428)
N1: (90.091,23.009,97.189)
N3: (88.315,24.434,97.917)
N4: (87.791,26.301,96.697)
C6: (90.295,23.804,96.094)
C5: (89.554,24.894,95.885)
O3': (90.080,18.632,95.895)
OP1: (89.213,16.598,94.679)
OP2: (89.993,18.672,93.382)
C3': (85.482,17.181,95.777)
C1': (84.304,16.323,93.914)
C5': (86.857,18.184,93.868)
O6: (84.610,14.732,88.182)
O4': (84.511,17.708,93.745)
C8: (85.360,14.552,92.391)
C2: (83.249,17.492,89.957)
C6: (84.355,15.457,89.144)
C5: (84.687,15.262,90.504)
C4: (84.244,16.182,91.427)
P: (89.346,18.071,94.584)
C4': (85.562,18.149,94.618)
C2': (85.158,15.860,95.091)
O2': (84.419,14.980,95.916)
N1: (83.625,16.628,88.958)
N2: (82.546,18.566,89.590)
N3: (83.535,17.313,91.226)
N7: (85.409,14.248,91.122)
N9: (84.641,15.703,92.640)
O5': (87.881,18.654,94.717)
O3': (84.410,17.620,96.583)
Image (generated by PyMOL):
PyMOL image
show in jmol