Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0899:01001
Extra
PDB:
ATOM 1 O3' G A 898 35.314 90.303 83.380 1.00 27.32 O
ATOM 2 P A A 899 35.468 90.624 84.949 1.00 27.93 P
ATOM 3 OP1 A A 899 35.912 89.391 85.641 1.00 24.46 O
ATOM 4 OP2 A A 899 34.239 91.314 85.409 1.00 27.27 O
ATOM 5 O5' A A 899 36.665 91.676 84.986 1.00 28.07 O
ATOM 6 C5' A A 899 38.016 91.252 85.234 1.00 27.06 C
ATOM 7 C4' A A 899 38.715 90.928 83.937 1.00 27.16 C
ATOM 8 O4' A A 899 38.602 92.051 83.026 1.00 27.89 O
ATOM 9 C3' A A 899 40.208 90.717 84.097 1.00 28.12 C
ATOM 10 O3' A A 899 40.536 89.402 84.513 1.00 25.95 O
ATOM 11 C2' A A 899 40.753 91.087 82.726 1.00 29.24 C
ATOM 12 O2' A A 899 40.639 90.052 81.776 1.00 28.66 O
ATOM 13 C1' A A 899 39.836 92.254 82.350 1.00 29.78 C
ATOM 14 N9 A A 899 40.358 93.566 82.748 1.00 30.46 N
ATOM 15 C8 A A 899 39.706 94.532 83.472 1.00 30.90 C
ATOM 16 N7 A A 899 40.412 95.615 83.669 1.00 31.83 N
ATOM 17 C5 A A 899 41.614 95.350 83.033 1.00 32.40 C
ATOM 18 C6 A A 899 42.786 96.113 82.868 1.00 32.33 C
ATOM 19 N6 A A 899 42.938 97.346 83.347 1.00 32.64 N
ATOM 20 N1 A A 899 43.808 95.558 82.184 1.00 32.72 N
ATOM 21 C2 A A 899 43.654 94.320 81.701 1.00 35.36 C
ATOM 22 N3 A A 899 42.600 93.504 81.783 1.00 35.58 N
ATOM 23 C4 A A 899 41.601 94.087 82.469 1.00 32.49 C
ATOM 24 P A A 900 41.640 89.198 85.654 1.00 27.74 P
ATOM 25 OP1 A A 900 41.855 87.754 85.863 1.00 26.13 O
ATOM 26 OP2 A A 900 41.275 90.066 86.810 1.00 26.57 O
ATOM 27 O5' A A 900 42.964 89.771 84.991 1.00 27.70 O
TER
ATOM 1 O3' U B1000 45.641 98.649 77.748 1.00 26.60 O
ATOM 2 P U B1001 47.154 98.773 78.280 1.00 28.27 P
ATOM 3 OP1 U B1001 47.204 99.922 79.207 1.00 26.55 O
ATOM 4 OP2 U B1001 48.084 98.723 77.127 1.00 26.80 O
ATOM 5 O5' U B1001 47.349 97.457 79.158 1.00 28.50 O
ATOM 6 C5' U B1001 46.567 97.253 80.362 1.00 28.25 C
ATOM 7 C4' U B1001 46.942 95.948 81.028 1.00 26.68 C
ATOM 8 O4' U B1001 46.636 94.840 80.144 1.00 27.26 O
ATOM 9 C3' U B1001 48.418 95.787 81.321 1.00 25.19 C
ATOM 10 O3' U B1001 48.773 96.428 82.530 1.00 24.60 O
ATOM 11 C2' U B1001 48.578 94.278 81.387 1.00 26.09 C
ATOM 12 O2' U B1001 48.132 93.744 82.619 1.00 25.33 O
ATOM 13 C1' U B1001 47.629 93.836 80.273 1.00 25.57 C
ATOM 14 N1 U B1001 48.271 93.645 78.961 1.00 24.81 N
ATOM 15 C2 U B1001 49.031 92.503 78.768 1.00 25.62 C
ATOM 16 O2 U B1001 49.219 91.675 79.641 1.00 26.59 O
ATOM 17 N3 U B1001 49.565 92.366 77.513 1.00 25.33 N
ATOM 18 C4 U B1001 49.430 93.236 76.453 1.00 25.59 C
ATOM 19 O4 U B1001 49.939 92.953 75.366 1.00 26.73 O
ATOM 20 C5 U B1001 48.651 94.401 76.736 1.00 25.83 C
ATOM 21 C6 U B1001 48.114 94.563 77.947 1.00 25.31 C
ATOM 22 P C B1002 50.275 96.930 82.735 1.00 22.98 P
ATOM 23 OP1 C B1002 50.365 97.592 84.049 1.00 20.67 O
ATOM 24 OP2 C B1002 50.668 97.659 81.512 1.00 26.34 O
ATOM 25 O5' C B1002 51.125 95.591 82.760 1.00 23.71 O
TER
ATOM 2 P A A 899 35.468 90.624 84.949 1.00 27.93 P
ATOM 3 OP1 A A 899 35.912 89.391 85.641 1.00 24.46 O
ATOM 4 OP2 A A 899 34.239 91.314 85.409 1.00 27.27 O
ATOM 5 O5' A A 899 36.665 91.676 84.986 1.00 28.07 O
ATOM 6 C5' A A 899 38.016 91.252 85.234 1.00 27.06 C
ATOM 7 C4' A A 899 38.715 90.928 83.937 1.00 27.16 C
ATOM 8 O4' A A 899 38.602 92.051 83.026 1.00 27.89 O
ATOM 9 C3' A A 899 40.208 90.717 84.097 1.00 28.12 C
ATOM 10 O3' A A 899 40.536 89.402 84.513 1.00 25.95 O
ATOM 11 C2' A A 899 40.753 91.087 82.726 1.00 29.24 C
ATOM 12 O2' A A 899 40.639 90.052 81.776 1.00 28.66 O
ATOM 13 C1' A A 899 39.836 92.254 82.350 1.00 29.78 C
ATOM 14 N9 A A 899 40.358 93.566 82.748 1.00 30.46 N
ATOM 15 C8 A A 899 39.706 94.532 83.472 1.00 30.90 C
ATOM 16 N7 A A 899 40.412 95.615 83.669 1.00 31.83 N
ATOM 17 C5 A A 899 41.614 95.350 83.033 1.00 32.40 C
ATOM 18 C6 A A 899 42.786 96.113 82.868 1.00 32.33 C
ATOM 19 N6 A A 899 42.938 97.346 83.347 1.00 32.64 N
ATOM 20 N1 A A 899 43.808 95.558 82.184 1.00 32.72 N
ATOM 21 C2 A A 899 43.654 94.320 81.701 1.00 35.36 C
ATOM 22 N3 A A 899 42.600 93.504 81.783 1.00 35.58 N
ATOM 23 C4 A A 899 41.601 94.087 82.469 1.00 32.49 C
ATOM 24 P A A 900 41.640 89.198 85.654 1.00 27.74 P
ATOM 25 OP1 A A 900 41.855 87.754 85.863 1.00 26.13 O
ATOM 26 OP2 A A 900 41.275 90.066 86.810 1.00 26.57 O
ATOM 27 O5' A A 900 42.964 89.771 84.991 1.00 27.70 O
TER
ATOM 1 O3' U B1000 45.641 98.649 77.748 1.00 26.60 O
ATOM 2 P U B1001 47.154 98.773 78.280 1.00 28.27 P
ATOM 3 OP1 U B1001 47.204 99.922 79.207 1.00 26.55 O
ATOM 4 OP2 U B1001 48.084 98.723 77.127 1.00 26.80 O
ATOM 5 O5' U B1001 47.349 97.457 79.158 1.00 28.50 O
ATOM 6 C5' U B1001 46.567 97.253 80.362 1.00 28.25 C
ATOM 7 C4' U B1001 46.942 95.948 81.028 1.00 26.68 C
ATOM 8 O4' U B1001 46.636 94.840 80.144 1.00 27.26 O
ATOM 9 C3' U B1001 48.418 95.787 81.321 1.00 25.19 C
ATOM 10 O3' U B1001 48.773 96.428 82.530 1.00 24.60 O
ATOM 11 C2' U B1001 48.578 94.278 81.387 1.00 26.09 C
ATOM 12 O2' U B1001 48.132 93.744 82.619 1.00 25.33 O
ATOM 13 C1' U B1001 47.629 93.836 80.273 1.00 25.57 C
ATOM 14 N1 U B1001 48.271 93.645 78.961 1.00 24.81 N
ATOM 15 C2 U B1001 49.031 92.503 78.768 1.00 25.62 C
ATOM 16 O2 U B1001 49.219 91.675 79.641 1.00 26.59 O
ATOM 17 N3 U B1001 49.565 92.366 77.513 1.00 25.33 N
ATOM 18 C4 U B1001 49.430 93.236 76.453 1.00 25.59 C
ATOM 19 O4 U B1001 49.939 92.953 75.366 1.00 26.73 O
ATOM 20 C5 U B1001 48.651 94.401 76.736 1.00 25.83 C
ATOM 21 C6 U B1001 48.114 94.563 77.947 1.00 25.31 C
ATOM 22 P C B1002 50.275 96.930 82.735 1.00 22.98 P
ATOM 23 OP1 C B1002 50.365 97.592 84.049 1.00 20.67 O
ATOM 24 OP2 C B1002 50.668 97.659 81.512 1.00 26.34 O
ATOM 25 O5' C B1002 51.125 95.591 82.760 1.00 23.71 O
TER
Atoms:
OP1: (35.912,89.391,85.641)
OP2: (34.239,91.314,85.409)
C3': (40.208,90.717,84.097)
C1': (39.836,92.254,82.350)
C5': (38.016,91.252,85.234)
O4': (38.602,92.051,83.026)
C8: (39.706,94.532,83.472)
O2': (40.639,90.052,81.776)
C6: (42.786,96.113,82.868)
C5: (41.614,95.350,83.033)
C4: (41.601,94.087,82.469)
P: (35.468,90.624,84.949)
C4': (38.715,90.928,83.937)
C2': (40.753,91.087,82.726)
C2: (43.654,94.320,81.701)
N1: (43.808,95.558,82.184)
N3: (42.600,93.504,81.783)
N6: (42.938,97.346,83.347)
N7: (40.412,95.615,83.669)
N9: (40.358,93.566,82.748)
O5': (36.665,91.676,84.986)
O3': (40.536,89.402,84.513)
OP2: (34.239,91.314,85.409)
C3': (40.208,90.717,84.097)
C1': (39.836,92.254,82.350)
C5': (38.016,91.252,85.234)
O4': (38.602,92.051,83.026)
C8: (39.706,94.532,83.472)
O2': (40.639,90.052,81.776)
C6: (42.786,96.113,82.868)
C5: (41.614,95.350,83.033)
C4: (41.601,94.087,82.469)
P: (35.468,90.624,84.949)
C4': (38.715,90.928,83.937)
C2': (40.753,91.087,82.726)
C2: (43.654,94.320,81.701)
N1: (43.808,95.558,82.184)
N3: (42.600,93.504,81.783)
N6: (42.938,97.346,83.347)
N7: (40.412,95.615,83.669)
N9: (40.358,93.566,82.748)
O5': (36.665,91.676,84.986)
O3': (40.536,89.402,84.513)
C4: (49.430,93.236,76.453)
N3: (49.565,92.366,77.513)
OP1: (47.204,99.922,79.207)
OP2: (48.084,98.723,77.127)
C2: (49.031,92.503,78.768)
C1': (47.629,93.836,80.273)
C3': (48.418,95.787,81.321)
O5': (47.349,97.457,79.158)
O4': (46.636,94.840,80.144)
C5': (46.567,97.253,80.362)
P: (47.154,98.773,78.280)
C4': (46.942,95.948,81.028)
C2': (48.578,94.278,81.387)
O2': (48.132,93.744,82.619)
N1: (48.271,93.645,78.961)
O4: (49.939,92.953,75.366)
O2: (49.219,91.675,79.641)
C6: (48.114,94.563,77.947)
C5: (48.651,94.401,76.736)
O3': (48.773,96.428,82.530)
N3: (49.565,92.366,77.513)
OP1: (47.204,99.922,79.207)
OP2: (48.084,98.723,77.127)
C2: (49.031,92.503,78.768)
C1': (47.629,93.836,80.273)
C3': (48.418,95.787,81.321)
O5': (47.349,97.457,79.158)
O4': (46.636,94.840,80.144)
C5': (46.567,97.253,80.362)
P: (47.154,98.773,78.280)
C4': (46.942,95.948,81.028)
C2': (48.578,94.278,81.387)
O2': (48.132,93.744,82.619)
N1: (48.271,93.645,78.961)
O4: (49.939,92.953,75.366)
O2: (49.219,91.675,79.641)
C6: (48.114,94.563,77.947)
C5: (48.651,94.401,76.736)
O3': (48.773,96.428,82.530)
Image (generated by PyMOL):