Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01004:01005
Extra
PDB:
ATOM 1 O3' C A1003 54.723 97.451 90.349 1.00 38.87 O
ATOM 2 P G A1004 55.015 95.888 90.574 1.00 40.64 P
ATOM 3 OP1 G A1004 56.379 95.748 91.127 1.00 43.78 O
ATOM 4 OP2 G A1004 54.663 95.163 89.333 1.00 41.66 O
ATOM 5 O5' G A1004 53.984 95.449 91.702 1.00 41.35 O
ATOM 6 C5' G A1004 52.592 95.363 91.417 1.00 39.89 C
ATOM 7 C4' G A1004 51.865 96.482 92.098 1.00 39.30 C
ATOM 8 O4' G A1004 50.608 96.699 91.417 1.00 40.47 O
ATOM 9 C3' G A1004 51.469 96.273 93.550 1.00 40.06 C
ATOM 10 O3' G A1004 52.530 96.502 94.483 1.00 40.71 O
ATOM 11 C2' G A1004 50.338 97.280 93.700 1.00 39.55 C
ATOM 12 O2' G A1004 50.804 98.605 93.824 1.00 40.24 O
ATOM 13 C1' G A1004 49.640 97.143 92.347 1.00 38.70 C
ATOM 14 N9 G A1004 48.559 96.169 92.385 1.00 36.93 N
ATOM 15 C8 G A1004 48.576 94.883 91.914 1.00 38.01 C
ATOM 16 N7 G A1004 47.453 94.253 92.113 1.00 37.81 N
ATOM 17 C5 G A1004 46.652 95.182 92.752 1.00 37.35 C
ATOM 18 C6 G A1004 45.331 95.075 93.221 1.00 37.18 C
ATOM 19 O6 G A1004 44.583 94.093 93.191 1.00 37.85 O
ATOM 20 N1 G A1004 44.895 96.269 93.784 1.00 36.80 N
ATOM 21 C2 G A1004 45.648 97.412 93.892 1.00 36.38 C
ATOM 22 N2 G A1004 45.064 98.474 94.448 1.00 38.72 N
ATOM 23 N3 G A1004 46.886 97.511 93.479 1.00 37.64 N
ATOM 24 C4 G A1004 47.321 96.370 92.918 1.00 37.25 C
ATOM 25 P G A1005 52.493 95.784 95.934 1.00 41.88 P
ATOM 26 OP1 G A1005 53.719 96.241 96.644 1.00 40.71 O
ATOM 27 OP2 G A1005 52.231 94.323 95.789 1.00 40.57 O
ATOM 28 O5' G A1005 51.210 96.405 96.647 1.00 38.60 O
TER
ATOM 1 O3' G B1004 52.530 96.502 94.483 1.00 40.71 O
ATOM 2 P G B1005 52.493 95.784 95.934 1.00 41.88 P
ATOM 3 OP1 G B1005 53.719 96.241 96.644 1.00 40.71 O
ATOM 4 OP2 G B1005 52.231 94.323 95.789 1.00 40.57 O
ATOM 5 O5' G B1005 51.210 96.405 96.647 1.00 38.60 O
ATOM 6 C5' G B1005 51.196 97.780 97.047 1.00 37.65 C
ATOM 7 C4' G B1005 49.862 98.143 97.638 1.00 35.50 C
ATOM 8 O4' G B1005 48.836 97.940 96.638 1.00 37.76 O
ATOM 9 C3' G B1005 49.379 97.315 98.814 1.00 34.85 C
ATOM 10 O3' G B1005 49.965 97.744 100.031 1.00 34.87 O
ATOM 11 C2' G B1005 47.886 97.594 98.779 1.00 36.48 C
ATOM 12 O2' G B1005 47.566 98.901 99.224 1.00 35.68 O
ATOM 13 C1' G B1005 47.626 97.546 97.276 1.00 37.23 C
ATOM 14 N9 G B1005 47.260 96.208 96.821 1.00 36.19 N
ATOM 15 C8 G B1005 48.035 95.312 96.126 1.00 36.28 C
ATOM 16 N7 G B1005 47.418 94.192 95.871 1.00 35.14 N
ATOM 17 C5 G B1005 46.160 94.362 96.429 1.00 36.12 C
ATOM 18 C6 G B1005 45.051 93.487 96.472 1.00 36.37 C
ATOM 19 O6 G B1005 44.938 92.355 95.985 1.00 38.61 O
ATOM 20 N1 G B1005 43.989 94.050 97.162 1.00 36.10 N
ATOM 21 C2 G B1005 43.985 95.292 97.724 1.00 36.92 C
ATOM 22 N2 G B1005 42.870 95.642 98.366 1.00 37.93 N
ATOM 23 N3 G B1005 45.000 96.128 97.670 1.00 37.69 N
ATOM 24 C4 G B1005 46.050 95.599 97.018 1.00 36.48 C
ATOM 25 P U B1006 50.074 96.727 101.272 1.00 33.30 P
ATOM 26 OP1 U B1006 50.800 97.440 102.343 1.00 32.04 O
ATOM 27 OP2 U B1006 50.593 95.448 100.770 1.00 33.95 O
ATOM 28 O5' U B1006 48.572 96.524 101.748 1.00 30.38 O
TER
ATOM 2 P G A1004 55.015 95.888 90.574 1.00 40.64 P
ATOM 3 OP1 G A1004 56.379 95.748 91.127 1.00 43.78 O
ATOM 4 OP2 G A1004 54.663 95.163 89.333 1.00 41.66 O
ATOM 5 O5' G A1004 53.984 95.449 91.702 1.00 41.35 O
ATOM 6 C5' G A1004 52.592 95.363 91.417 1.00 39.89 C
ATOM 7 C4' G A1004 51.865 96.482 92.098 1.00 39.30 C
ATOM 8 O4' G A1004 50.608 96.699 91.417 1.00 40.47 O
ATOM 9 C3' G A1004 51.469 96.273 93.550 1.00 40.06 C
ATOM 10 O3' G A1004 52.530 96.502 94.483 1.00 40.71 O
ATOM 11 C2' G A1004 50.338 97.280 93.700 1.00 39.55 C
ATOM 12 O2' G A1004 50.804 98.605 93.824 1.00 40.24 O
ATOM 13 C1' G A1004 49.640 97.143 92.347 1.00 38.70 C
ATOM 14 N9 G A1004 48.559 96.169 92.385 1.00 36.93 N
ATOM 15 C8 G A1004 48.576 94.883 91.914 1.00 38.01 C
ATOM 16 N7 G A1004 47.453 94.253 92.113 1.00 37.81 N
ATOM 17 C5 G A1004 46.652 95.182 92.752 1.00 37.35 C
ATOM 18 C6 G A1004 45.331 95.075 93.221 1.00 37.18 C
ATOM 19 O6 G A1004 44.583 94.093 93.191 1.00 37.85 O
ATOM 20 N1 G A1004 44.895 96.269 93.784 1.00 36.80 N
ATOM 21 C2 G A1004 45.648 97.412 93.892 1.00 36.38 C
ATOM 22 N2 G A1004 45.064 98.474 94.448 1.00 38.72 N
ATOM 23 N3 G A1004 46.886 97.511 93.479 1.00 37.64 N
ATOM 24 C4 G A1004 47.321 96.370 92.918 1.00 37.25 C
ATOM 25 P G A1005 52.493 95.784 95.934 1.00 41.88 P
ATOM 26 OP1 G A1005 53.719 96.241 96.644 1.00 40.71 O
ATOM 27 OP2 G A1005 52.231 94.323 95.789 1.00 40.57 O
ATOM 28 O5' G A1005 51.210 96.405 96.647 1.00 38.60 O
TER
ATOM 1 O3' G B1004 52.530 96.502 94.483 1.00 40.71 O
ATOM 2 P G B1005 52.493 95.784 95.934 1.00 41.88 P
ATOM 3 OP1 G B1005 53.719 96.241 96.644 1.00 40.71 O
ATOM 4 OP2 G B1005 52.231 94.323 95.789 1.00 40.57 O
ATOM 5 O5' G B1005 51.210 96.405 96.647 1.00 38.60 O
ATOM 6 C5' G B1005 51.196 97.780 97.047 1.00 37.65 C
ATOM 7 C4' G B1005 49.862 98.143 97.638 1.00 35.50 C
ATOM 8 O4' G B1005 48.836 97.940 96.638 1.00 37.76 O
ATOM 9 C3' G B1005 49.379 97.315 98.814 1.00 34.85 C
ATOM 10 O3' G B1005 49.965 97.744 100.031 1.00 34.87 O
ATOM 11 C2' G B1005 47.886 97.594 98.779 1.00 36.48 C
ATOM 12 O2' G B1005 47.566 98.901 99.224 1.00 35.68 O
ATOM 13 C1' G B1005 47.626 97.546 97.276 1.00 37.23 C
ATOM 14 N9 G B1005 47.260 96.208 96.821 1.00 36.19 N
ATOM 15 C8 G B1005 48.035 95.312 96.126 1.00 36.28 C
ATOM 16 N7 G B1005 47.418 94.192 95.871 1.00 35.14 N
ATOM 17 C5 G B1005 46.160 94.362 96.429 1.00 36.12 C
ATOM 18 C6 G B1005 45.051 93.487 96.472 1.00 36.37 C
ATOM 19 O6 G B1005 44.938 92.355 95.985 1.00 38.61 O
ATOM 20 N1 G B1005 43.989 94.050 97.162 1.00 36.10 N
ATOM 21 C2 G B1005 43.985 95.292 97.724 1.00 36.92 C
ATOM 22 N2 G B1005 42.870 95.642 98.366 1.00 37.93 N
ATOM 23 N3 G B1005 45.000 96.128 97.670 1.00 37.69 N
ATOM 24 C4 G B1005 46.050 95.599 97.018 1.00 36.48 C
ATOM 25 P U B1006 50.074 96.727 101.272 1.00 33.30 P
ATOM 26 OP1 U B1006 50.800 97.440 102.343 1.00 32.04 O
ATOM 27 OP2 U B1006 50.593 95.448 100.770 1.00 33.95 O
ATOM 28 O5' U B1006 48.572 96.524 101.748 1.00 30.38 O
TER
Atoms:
OP1: (56.379,95.748,91.127)
OP2: (54.663,95.163,89.333)
C3': (51.469,96.273,93.550)
C1': (49.640,97.143,92.347)
C5': (52.592,95.363,91.417)
O6: (44.583,94.093,93.191)
O4': (50.608,96.699,91.417)
C8: (48.576,94.883,91.914)
C2: (45.648,97.412,93.892)
C6: (45.331,95.075,93.221)
C5: (46.652,95.182,92.752)
C4: (47.321,96.370,92.918)
P: (55.015,95.888,90.574)
C4': (51.865,96.482,92.098)
C2': (50.338,97.280,93.700)
O2': (50.804,98.605,93.824)
N1: (44.895,96.269,93.784)
N2: (45.064,98.474,94.448)
N3: (46.886,97.511,93.479)
N7: (47.453,94.253,92.113)
N9: (48.559,96.169,92.385)
O5': (53.984,95.449,91.702)
O3': (52.530,96.502,94.483)
OP2: (54.663,95.163,89.333)
C3': (51.469,96.273,93.550)
C1': (49.640,97.143,92.347)
C5': (52.592,95.363,91.417)
O6: (44.583,94.093,93.191)
O4': (50.608,96.699,91.417)
C8: (48.576,94.883,91.914)
C2: (45.648,97.412,93.892)
C6: (45.331,95.075,93.221)
C5: (46.652,95.182,92.752)
C4: (47.321,96.370,92.918)
P: (55.015,95.888,90.574)
C4': (51.865,96.482,92.098)
C2': (50.338,97.280,93.700)
O2': (50.804,98.605,93.824)
N1: (44.895,96.269,93.784)
N2: (45.064,98.474,94.448)
N3: (46.886,97.511,93.479)
N7: (47.453,94.253,92.113)
N9: (48.559,96.169,92.385)
O5': (53.984,95.449,91.702)
O3': (52.530,96.502,94.483)
OP1: (53.719,96.241,96.644)
OP2: (52.231,94.323,95.789)
C3': (49.379,97.315,98.814)
C1': (47.626,97.546,97.276)
C5': (51.196,97.780,97.047)
O6: (44.938,92.355,95.985)
O4': (48.836,97.940,96.638)
C8: (48.035,95.312,96.126)
C2: (43.985,95.292,97.724)
C6: (45.051,93.487,96.472)
C5: (46.160,94.362,96.429)
C4: (46.050,95.599,97.018)
P: (52.493,95.784,95.934)
C4': (49.862,98.143,97.638)
C2': (47.886,97.594,98.779)
O2': (47.566,98.901,99.224)
N1: (43.989,94.050,97.162)
N2: (42.870,95.642,98.366)
N3: (45.000,96.128,97.670)
N7: (47.418,94.192,95.871)
N9: (47.260,96.208,96.821)
O5': (51.210,96.405,96.647)
O3': (49.965,97.744,100.031)
OP2: (52.231,94.323,95.789)
C3': (49.379,97.315,98.814)
C1': (47.626,97.546,97.276)
C5': (51.196,97.780,97.047)
O6: (44.938,92.355,95.985)
O4': (48.836,97.940,96.638)
C8: (48.035,95.312,96.126)
C2: (43.985,95.292,97.724)
C6: (45.051,93.487,96.472)
C5: (46.160,94.362,96.429)
C4: (46.050,95.599,97.018)
P: (52.493,95.784,95.934)
C4': (49.862,98.143,97.638)
C2': (47.886,97.594,98.779)
O2': (47.566,98.901,99.224)
N1: (43.989,94.050,97.162)
N2: (42.870,95.642,98.366)
N3: (45.000,96.128,97.670)
N7: (47.418,94.192,95.871)
N9: (47.260,96.208,96.821)
O5': (51.210,96.405,96.647)
O3': (49.965,97.744,100.031)
Image (generated by PyMOL):