Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:941:942
Extra
PDB:
ATOM 1 O3' C A 40 93.942 23.256 92.144 1.00 79.78 O
ATOM 2 P C A 41 92.746 22.202 91.920 1.00 78.81 P
ATOM 3 OP1 C A 41 93.189 21.199 90.918 1.00 78.92 O
ATOM 4 OP2 C A 41 91.484 22.955 91.697 1.00 78.57 O
ATOM 5 O5' C A 41 92.648 21.459 93.323 1.00 78.14 O
ATOM 6 C5' C A 41 91.472 20.742 93.687 1.00 76.96 C
ATOM 7 C4' C A 41 91.415 20.552 95.180 1.00 76.92 C
ATOM 8 O4' C A 41 91.581 21.822 95.857 1.00 77.97 O
ATOM 9 C3' C A 41 90.072 20.038 95.648 1.00 76.93 C
ATOM 10 O3' C A 41 90.037 18.632 95.524 1.00 75.95 O
ATOM 11 C2' C A 41 89.999 20.533 97.083 1.00 78.29 C
ATOM 12 O2' C A 41 90.732 19.721 97.980 1.00 80.15 O
ATOM 13 C1' C A 41 90.688 21.897 96.960 1.00 79.04 C
ATOM 14 N1 C A 41 89.787 23.056 96.750 1.00 80.75 N
ATOM 15 C2 C A 41 88.771 23.329 97.690 1.00 81.19 C
ATOM 16 O2 C A 41 88.604 22.556 98.645 1.00 82.20 O
ATOM 17 N3 C A 41 87.998 24.428 97.522 1.00 81.28 N
ATOM 18 C4 C A 41 88.192 25.228 96.470 1.00 81.00 C
ATOM 19 N4 C A 41 87.424 26.312 96.358 1.00 81.63 N
ATOM 20 C5 C A 41 89.187 24.957 95.489 1.00 80.69 C
ATOM 21 C6 C A 41 89.952 23.874 95.663 1.00 81.26 C
ATOM 22 P G A 42 89.285 17.977 94.274 1.00 75.68 P
ATOM 23 OP1 G A 42 89.166 16.518 94.517 1.00 77.53 O
ATOM 24 OP2 G A 42 89.910 18.458 93.015 1.00 74.76 O
ATOM 25 O5' G A 42 87.835 18.612 94.388 1.00 75.52 O
TER
ATOM 1 O3' C B 41 90.037 18.632 95.524 1.00 75.95 O
ATOM 2 P G B 42 89.285 17.977 94.274 1.00 75.68 P
ATOM 3 OP1 G B 42 89.166 16.518 94.517 1.00 77.53 O
ATOM 4 OP2 G B 42 89.910 18.458 93.015 1.00 74.76 O
ATOM 5 O5' G B 42 87.835 18.612 94.388 1.00 75.52 O
ATOM 6 C5' G B 42 86.828 18.266 93.453 1.00 74.04 C
ATOM 7 C4' G B 42 85.506 18.145 94.151 1.00 73.39 C
ATOM 8 O4' G B 42 84.517 17.754 93.178 1.00 74.58 O
ATOM 9 C3' G B 42 85.414 17.091 95.246 1.00 72.86 C
ATOM 10 O3' G B 42 84.333 17.440 96.106 1.00 72.45 O
ATOM 11 C2' G B 42 85.103 15.831 94.449 1.00 73.83 C
ATOM 12 O2' G B 42 84.383 14.881 95.207 1.00 74.77 O
ATOM 13 C1' G B 42 84.229 16.378 93.318 1.00 74.74 C
ATOM 14 N9 G B 42 84.440 15.756 92.014 1.00 75.43 N
ATOM 15 C8 G B 42 85.120 14.595 91.727 1.00 75.89 C
ATOM 16 N7 G B 42 85.097 14.291 90.458 1.00 75.72 N
ATOM 17 C5 G B 42 84.366 15.314 89.872 1.00 75.36 C
ATOM 18 C6 G B 42 83.993 15.516 88.525 1.00 75.19 C
ATOM 19 O6 G B 42 84.227 14.799 87.546 1.00 76.12 O
ATOM 20 N1 G B 42 83.261 16.689 88.369 1.00 74.80 N
ATOM 21 C2 G B 42 82.919 17.549 89.383 1.00 74.23 C
ATOM 22 N2 G B 42 82.209 18.625 89.034 1.00 74.38 N
ATOM 23 N3 G B 42 83.249 17.364 90.644 1.00 74.53 N
ATOM 24 C4 G B 42 83.966 16.233 90.816 1.00 75.76 C
ATOM 25 P A B 43 84.398 17.104 97.679 1.00 71.57 P
ATOM 26 OP1 A B 43 85.808 17.102 98.166 1.00 72.38 O
ATOM 27 OP2 A B 43 83.544 15.910 97.889 1.00 70.43 O
ATOM 28 O5' A B 43 83.667 18.356 98.331 1.00 70.71 O
TER
ATOM 2 P C A 41 92.746 22.202 91.920 1.00 78.81 P
ATOM 3 OP1 C A 41 93.189 21.199 90.918 1.00 78.92 O
ATOM 4 OP2 C A 41 91.484 22.955 91.697 1.00 78.57 O
ATOM 5 O5' C A 41 92.648 21.459 93.323 1.00 78.14 O
ATOM 6 C5' C A 41 91.472 20.742 93.687 1.00 76.96 C
ATOM 7 C4' C A 41 91.415 20.552 95.180 1.00 76.92 C
ATOM 8 O4' C A 41 91.581 21.822 95.857 1.00 77.97 O
ATOM 9 C3' C A 41 90.072 20.038 95.648 1.00 76.93 C
ATOM 10 O3' C A 41 90.037 18.632 95.524 1.00 75.95 O
ATOM 11 C2' C A 41 89.999 20.533 97.083 1.00 78.29 C
ATOM 12 O2' C A 41 90.732 19.721 97.980 1.00 80.15 O
ATOM 13 C1' C A 41 90.688 21.897 96.960 1.00 79.04 C
ATOM 14 N1 C A 41 89.787 23.056 96.750 1.00 80.75 N
ATOM 15 C2 C A 41 88.771 23.329 97.690 1.00 81.19 C
ATOM 16 O2 C A 41 88.604 22.556 98.645 1.00 82.20 O
ATOM 17 N3 C A 41 87.998 24.428 97.522 1.00 81.28 N
ATOM 18 C4 C A 41 88.192 25.228 96.470 1.00 81.00 C
ATOM 19 N4 C A 41 87.424 26.312 96.358 1.00 81.63 N
ATOM 20 C5 C A 41 89.187 24.957 95.489 1.00 80.69 C
ATOM 21 C6 C A 41 89.952 23.874 95.663 1.00 81.26 C
ATOM 22 P G A 42 89.285 17.977 94.274 1.00 75.68 P
ATOM 23 OP1 G A 42 89.166 16.518 94.517 1.00 77.53 O
ATOM 24 OP2 G A 42 89.910 18.458 93.015 1.00 74.76 O
ATOM 25 O5' G A 42 87.835 18.612 94.388 1.00 75.52 O
TER
ATOM 1 O3' C B 41 90.037 18.632 95.524 1.00 75.95 O
ATOM 2 P G B 42 89.285 17.977 94.274 1.00 75.68 P
ATOM 3 OP1 G B 42 89.166 16.518 94.517 1.00 77.53 O
ATOM 4 OP2 G B 42 89.910 18.458 93.015 1.00 74.76 O
ATOM 5 O5' G B 42 87.835 18.612 94.388 1.00 75.52 O
ATOM 6 C5' G B 42 86.828 18.266 93.453 1.00 74.04 C
ATOM 7 C4' G B 42 85.506 18.145 94.151 1.00 73.39 C
ATOM 8 O4' G B 42 84.517 17.754 93.178 1.00 74.58 O
ATOM 9 C3' G B 42 85.414 17.091 95.246 1.00 72.86 C
ATOM 10 O3' G B 42 84.333 17.440 96.106 1.00 72.45 O
ATOM 11 C2' G B 42 85.103 15.831 94.449 1.00 73.83 C
ATOM 12 O2' G B 42 84.383 14.881 95.207 1.00 74.77 O
ATOM 13 C1' G B 42 84.229 16.378 93.318 1.00 74.74 C
ATOM 14 N9 G B 42 84.440 15.756 92.014 1.00 75.43 N
ATOM 15 C8 G B 42 85.120 14.595 91.727 1.00 75.89 C
ATOM 16 N7 G B 42 85.097 14.291 90.458 1.00 75.72 N
ATOM 17 C5 G B 42 84.366 15.314 89.872 1.00 75.36 C
ATOM 18 C6 G B 42 83.993 15.516 88.525 1.00 75.19 C
ATOM 19 O6 G B 42 84.227 14.799 87.546 1.00 76.12 O
ATOM 20 N1 G B 42 83.261 16.689 88.369 1.00 74.80 N
ATOM 21 C2 G B 42 82.919 17.549 89.383 1.00 74.23 C
ATOM 22 N2 G B 42 82.209 18.625 89.034 1.00 74.38 N
ATOM 23 N3 G B 42 83.249 17.364 90.644 1.00 74.53 N
ATOM 24 C4 G B 42 83.966 16.233 90.816 1.00 75.76 C
ATOM 25 P A B 43 84.398 17.104 97.679 1.00 71.57 P
ATOM 26 OP1 A B 43 85.808 17.102 98.166 1.00 72.38 O
ATOM 27 OP2 A B 43 83.544 15.910 97.889 1.00 70.43 O
ATOM 28 O5' A B 43 83.667 18.356 98.331 1.00 70.71 O
TER
Atoms:
C2: (88.771,23.329,97.690)
OP1: (93.189,21.199,90.918)
OP2: (91.484,22.955,91.697)
C4: (88.192,25.228,96.470)
O5': (92.648,21.459,93.323)
C3': (90.072,20.038,95.648)
C1': (90.688,21.897,96.960)
O4': (91.581,21.822,95.857)
C5': (91.472,20.742,93.687)
P: (92.746,22.202,91.920)
O2: (88.604,22.556,98.645)
C4': (91.415,20.552,95.180)
C2': (89.999,20.533,97.083)
O2': (90.732,19.721,97.980)
N1: (89.787,23.056,96.750)
N3: (87.998,24.428,97.522)
N4: (87.424,26.312,96.358)
C6: (89.952,23.874,95.663)
C5: (89.187,24.957,95.489)
O3': (90.037,18.632,95.524)
OP1: (93.189,21.199,90.918)
OP2: (91.484,22.955,91.697)
C4: (88.192,25.228,96.470)
O5': (92.648,21.459,93.323)
C3': (90.072,20.038,95.648)
C1': (90.688,21.897,96.960)
O4': (91.581,21.822,95.857)
C5': (91.472,20.742,93.687)
P: (92.746,22.202,91.920)
O2: (88.604,22.556,98.645)
C4': (91.415,20.552,95.180)
C2': (89.999,20.533,97.083)
O2': (90.732,19.721,97.980)
N1: (89.787,23.056,96.750)
N3: (87.998,24.428,97.522)
N4: (87.424,26.312,96.358)
C6: (89.952,23.874,95.663)
C5: (89.187,24.957,95.489)
O3': (90.037,18.632,95.524)
OP1: (89.166,16.518,94.517)
OP2: (89.910,18.458,93.015)
C3': (85.414,17.091,95.246)
C1': (84.229,16.378,93.318)
C5': (86.828,18.266,93.453)
O6: (84.227,14.799,87.546)
O4': (84.517,17.754,93.178)
C8: (85.120,14.595,91.727)
C2: (82.919,17.549,89.383)
C6: (83.993,15.516,88.525)
C5: (84.366,15.314,89.872)
C4: (83.966,16.233,90.816)
P: (89.285,17.977,94.274)
C4': (85.506,18.145,94.151)
C2': (85.103,15.831,94.449)
O2': (84.383,14.881,95.207)
N1: (83.261,16.689,88.369)
N2: (82.209,18.625,89.034)
N3: (83.249,17.364,90.644)
N7: (85.097,14.291,90.458)
N9: (84.440,15.756,92.014)
O5': (87.835,18.612,94.388)
O3': (84.333,17.440,96.106)
OP2: (89.910,18.458,93.015)
C3': (85.414,17.091,95.246)
C1': (84.229,16.378,93.318)
C5': (86.828,18.266,93.453)
O6: (84.227,14.799,87.546)
O4': (84.517,17.754,93.178)
C8: (85.120,14.595,91.727)
C2: (82.919,17.549,89.383)
C6: (83.993,15.516,88.525)
C5: (84.366,15.314,89.872)
C4: (83.966,16.233,90.816)
P: (89.285,17.977,94.274)
C4': (85.506,18.145,94.151)
C2': (85.103,15.831,94.449)
O2': (84.383,14.881,95.207)
N1: (83.261,16.689,88.369)
N2: (82.209,18.625,89.034)
N3: (83.249,17.364,90.644)
N7: (85.097,14.291,90.458)
N9: (84.440,15.756,92.014)
O5': (87.835,18.612,94.388)
O3': (84.333,17.440,96.106)
Image (generated by PyMOL):