Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02106:02092
Extra
PDB:
ATOM 1 O3' C A2105 115.865 108.944 45.215 1.00 57.79 O
ATOM 2 P A A2106 114.373 109.363 45.646 1.00 57.73 P
ATOM 3 OP1 A A2106 114.171 108.866 47.031 1.00 58.75 O
ATOM 4 OP2 A A2106 113.436 108.939 44.568 1.00 56.26 O
ATOM 5 O5' A A2106 114.413 110.955 45.701 1.00 53.34 O
ATOM 6 C5' A A2106 115.026 111.633 46.807 1.00 50.48 C
ATOM 7 C4' A A2106 114.915 113.126 46.632 1.00 48.59 C
ATOM 8 O4' A A2106 115.628 113.515 45.433 1.00 48.57 O
ATOM 9 C3' A A2106 113.513 113.658 46.408 1.00 48.46 C
ATOM 10 O3' A A2106 112.812 113.847 47.619 1.00 50.11 O
ATOM 11 C2' A A2106 113.781 114.971 45.702 1.00 47.38 C
ATOM 12 O2' A A2106 114.213 115.966 46.607 1.00 47.31 O
ATOM 13 C1' A A2106 114.928 114.562 44.779 1.00 46.16 C
ATOM 14 N9 A A2106 114.443 114.043 43.501 1.00 43.01 N
ATOM 15 C8 A A2106 114.356 112.730 43.092 1.00 42.12 C
ATOM 16 N7 A A2106 113.870 112.583 41.884 1.00 40.29 N
ATOM 17 C5 A A2106 113.621 113.884 41.469 1.00 40.87 C
ATOM 18 C6 A A2106 113.109 114.408 40.276 1.00 41.02 C
ATOM 19 N6 A A2106 112.744 113.653 39.234 1.00 40.61 N
ATOM 20 N1 A A2106 112.984 115.752 40.183 1.00 40.76 N
ATOM 21 C2 A A2106 113.356 116.504 41.226 1.00 40.93 C
ATOM 22 N3 A A2106 113.859 116.128 42.399 1.00 41.05 N
ATOM 23 C4 A A2106 113.968 114.791 42.455 1.00 41.25 C
ATOM 24 P C A2107 111.250 113.491 47.687 1.00 50.82 P
ATOM 25 OP1 C A2107 110.845 113.708 49.099 1.00 50.41 O
ATOM 26 OP2 C A2107 111.036 112.161 47.049 1.00 50.16 O
ATOM 27 O5' C A2107 110.560 114.587 46.763 1.00 47.64 O
TER
ATOM 1 O3' C B2091 111.487 119.386 36.468 1.00 55.21 O
ATOM 2 P U B2092 111.745 120.929 36.828 1.00 56.13 P
ATOM 3 OP1 U B2092 110.444 121.521 37.217 1.00 56.00 O
ATOM 4 OP2 U B2092 112.539 121.549 35.736 1.00 55.84 O
ATOM 5 O5' U B2092 112.673 120.871 38.117 1.00 56.23 O
ATOM 6 C5' U B2092 112.168 120.369 39.359 1.00 57.75 C
ATOM 7 C4' U B2092 113.216 120.489 40.434 1.00 59.92 C
ATOM 8 O4' U B2092 114.356 119.657 40.108 1.00 60.78 O
ATOM 9 C3' U B2092 113.814 121.868 40.611 1.00 60.95 C
ATOM 10 O3' U B2092 112.958 122.679 41.392 1.00 64.82 O
ATOM 11 C2' U B2092 115.132 121.556 41.304 1.00 61.16 C
ATOM 12 O2' U B2092 114.971 121.259 42.672 1.00 59.01 O
ATOM 13 C1' U B2092 115.540 120.267 40.592 1.00 62.39 C
ATOM 14 N1 U B2092 116.465 120.462 39.465 1.00 65.45 N
ATOM 15 C2 U B2092 117.820 120.304 39.709 1.00 66.85 C
ATOM 16 O2 U B2092 118.275 120.040 40.812 1.00 66.95 O
ATOM 17 N3 U B2092 118.626 120.468 38.610 1.00 68.91 N
ATOM 18 C4 U B2092 118.231 120.772 37.323 1.00 68.97 C
ATOM 19 O4 U B2092 119.080 120.864 36.436 1.00 70.10 O
ATOM 20 C5 U B2092 116.820 120.934 37.155 1.00 68.11 C
ATOM 21 C6 U B2092 116.005 120.779 38.202 1.00 66.58 C
ATOM 22 P C B2093 112.905 124.260 41.133 1.00 68.91 P
ATOM 23 OP1 C B2093 111.751 124.781 41.914 1.00 69.37 O
ATOM 24 OP2 C B2093 112.952 124.489 39.669 1.00 69.42 O
ATOM 25 O5' C B2093 114.263 124.790 41.787 1.00 70.10 O
TER
ATOM 2 P A A2106 114.373 109.363 45.646 1.00 57.73 P
ATOM 3 OP1 A A2106 114.171 108.866 47.031 1.00 58.75 O
ATOM 4 OP2 A A2106 113.436 108.939 44.568 1.00 56.26 O
ATOM 5 O5' A A2106 114.413 110.955 45.701 1.00 53.34 O
ATOM 6 C5' A A2106 115.026 111.633 46.807 1.00 50.48 C
ATOM 7 C4' A A2106 114.915 113.126 46.632 1.00 48.59 C
ATOM 8 O4' A A2106 115.628 113.515 45.433 1.00 48.57 O
ATOM 9 C3' A A2106 113.513 113.658 46.408 1.00 48.46 C
ATOM 10 O3' A A2106 112.812 113.847 47.619 1.00 50.11 O
ATOM 11 C2' A A2106 113.781 114.971 45.702 1.00 47.38 C
ATOM 12 O2' A A2106 114.213 115.966 46.607 1.00 47.31 O
ATOM 13 C1' A A2106 114.928 114.562 44.779 1.00 46.16 C
ATOM 14 N9 A A2106 114.443 114.043 43.501 1.00 43.01 N
ATOM 15 C8 A A2106 114.356 112.730 43.092 1.00 42.12 C
ATOM 16 N7 A A2106 113.870 112.583 41.884 1.00 40.29 N
ATOM 17 C5 A A2106 113.621 113.884 41.469 1.00 40.87 C
ATOM 18 C6 A A2106 113.109 114.408 40.276 1.00 41.02 C
ATOM 19 N6 A A2106 112.744 113.653 39.234 1.00 40.61 N
ATOM 20 N1 A A2106 112.984 115.752 40.183 1.00 40.76 N
ATOM 21 C2 A A2106 113.356 116.504 41.226 1.00 40.93 C
ATOM 22 N3 A A2106 113.859 116.128 42.399 1.00 41.05 N
ATOM 23 C4 A A2106 113.968 114.791 42.455 1.00 41.25 C
ATOM 24 P C A2107 111.250 113.491 47.687 1.00 50.82 P
ATOM 25 OP1 C A2107 110.845 113.708 49.099 1.00 50.41 O
ATOM 26 OP2 C A2107 111.036 112.161 47.049 1.00 50.16 O
ATOM 27 O5' C A2107 110.560 114.587 46.763 1.00 47.64 O
TER
ATOM 1 O3' C B2091 111.487 119.386 36.468 1.00 55.21 O
ATOM 2 P U B2092 111.745 120.929 36.828 1.00 56.13 P
ATOM 3 OP1 U B2092 110.444 121.521 37.217 1.00 56.00 O
ATOM 4 OP2 U B2092 112.539 121.549 35.736 1.00 55.84 O
ATOM 5 O5' U B2092 112.673 120.871 38.117 1.00 56.23 O
ATOM 6 C5' U B2092 112.168 120.369 39.359 1.00 57.75 C
ATOM 7 C4' U B2092 113.216 120.489 40.434 1.00 59.92 C
ATOM 8 O4' U B2092 114.356 119.657 40.108 1.00 60.78 O
ATOM 9 C3' U B2092 113.814 121.868 40.611 1.00 60.95 C
ATOM 10 O3' U B2092 112.958 122.679 41.392 1.00 64.82 O
ATOM 11 C2' U B2092 115.132 121.556 41.304 1.00 61.16 C
ATOM 12 O2' U B2092 114.971 121.259 42.672 1.00 59.01 O
ATOM 13 C1' U B2092 115.540 120.267 40.592 1.00 62.39 C
ATOM 14 N1 U B2092 116.465 120.462 39.465 1.00 65.45 N
ATOM 15 C2 U B2092 117.820 120.304 39.709 1.00 66.85 C
ATOM 16 O2 U B2092 118.275 120.040 40.812 1.00 66.95 O
ATOM 17 N3 U B2092 118.626 120.468 38.610 1.00 68.91 N
ATOM 18 C4 U B2092 118.231 120.772 37.323 1.00 68.97 C
ATOM 19 O4 U B2092 119.080 120.864 36.436 1.00 70.10 O
ATOM 20 C5 U B2092 116.820 120.934 37.155 1.00 68.11 C
ATOM 21 C6 U B2092 116.005 120.779 38.202 1.00 66.58 C
ATOM 22 P C B2093 112.905 124.260 41.133 1.00 68.91 P
ATOM 23 OP1 C B2093 111.751 124.781 41.914 1.00 69.37 O
ATOM 24 OP2 C B2093 112.952 124.489 39.669 1.00 69.42 O
ATOM 25 O5' C B2093 114.263 124.790 41.787 1.00 70.10 O
TER
Atoms:
OP1: (114.171,108.866,47.031)
OP2: (113.436,108.939,44.568)
C3': (113.513,113.658,46.408)
C1': (114.928,114.562,44.779)
C5': (115.026,111.633,46.807)
O4': (115.628,113.515,45.433)
C8: (114.356,112.730,43.092)
O2': (114.213,115.966,46.607)
C6: (113.109,114.408,40.276)
C5: (113.621,113.884,41.469)
C4: (113.968,114.791,42.455)
P: (114.373,109.363,45.646)
C4': (114.915,113.126,46.632)
C2': (113.781,114.971,45.702)
C2: (113.356,116.504,41.226)
N1: (112.984,115.752,40.183)
N3: (113.859,116.128,42.399)
N6: (112.744,113.653,39.234)
N7: (113.870,112.583,41.884)
N9: (114.443,114.043,43.501)
O5': (114.413,110.955,45.701)
O3': (112.812,113.847,47.619)
OP2: (113.436,108.939,44.568)
C3': (113.513,113.658,46.408)
C1': (114.928,114.562,44.779)
C5': (115.026,111.633,46.807)
O4': (115.628,113.515,45.433)
C8: (114.356,112.730,43.092)
O2': (114.213,115.966,46.607)
C6: (113.109,114.408,40.276)
C5: (113.621,113.884,41.469)
C4: (113.968,114.791,42.455)
P: (114.373,109.363,45.646)
C4': (114.915,113.126,46.632)
C2': (113.781,114.971,45.702)
C2: (113.356,116.504,41.226)
N1: (112.984,115.752,40.183)
N3: (113.859,116.128,42.399)
N6: (112.744,113.653,39.234)
N7: (113.870,112.583,41.884)
N9: (114.443,114.043,43.501)
O5': (114.413,110.955,45.701)
O3': (112.812,113.847,47.619)
C4: (118.231,120.772,37.323)
N3: (118.626,120.468,38.610)
OP1: (110.444,121.521,37.217)
OP2: (112.539,121.549,35.736)
C2: (117.820,120.304,39.709)
C1': (115.540,120.267,40.592)
C3': (113.814,121.868,40.611)
O5': (112.673,120.871,38.117)
O4': (114.356,119.657,40.108)
C5': (112.168,120.369,39.359)
P: (111.745,120.929,36.828)
C4': (113.216,120.489,40.434)
C2': (115.132,121.556,41.304)
O2': (114.971,121.259,42.672)
N1: (116.465,120.462,39.465)
O4: (119.080,120.864,36.436)
O2: (118.275,120.040,40.812)
C6: (116.005,120.779,38.202)
C5: (116.820,120.934,37.155)
O3': (112.958,122.679,41.392)
N3: (118.626,120.468,38.610)
OP1: (110.444,121.521,37.217)
OP2: (112.539,121.549,35.736)
C2: (117.820,120.304,39.709)
C1': (115.540,120.267,40.592)
C3': (113.814,121.868,40.611)
O5': (112.673,120.871,38.117)
O4': (114.356,119.657,40.108)
C5': (112.168,120.369,39.359)
P: (111.745,120.929,36.828)
C4': (113.216,120.489,40.434)
C2': (115.132,121.556,41.304)
O2': (114.971,121.259,42.672)
N1: (116.465,120.462,39.465)
O4: (119.080,120.864,36.436)
O2: (118.275,120.040,40.812)
C6: (116.005,120.779,38.202)
C5: (116.820,120.934,37.155)
O3': (112.958,122.679,41.392)
Image (generated by PyMOL):