ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YHQ:0899:01001

Extra

PDB:
ATOM 1 O3' G A 898 35.382 89.805 83.430 1.00 22.27 O
ATOM 2 P A A 899 35.645 90.170 84.978 1.00 24.77 P
ATOM 3 OP1 A A 899 36.153 88.949 85.635 1.00 18.26 O
ATOM 4 OP2 A A 899 34.452 90.874 85.533 1.00 20.73 O
ATOM 5 O5' A A 899 36.835 91.236 84.927 1.00 24.59 O
ATOM 6 C5' A A 899 38.184 90.852 85.226 1.00 21.39 C
ATOM 7 C4' A A 899 38.905 90.436 83.965 1.00 21.21 C
ATOM 8 O4' A A 899 38.799 91.479 82.962 1.00 21.87 O
ATOM 9 C3' A A 899 40.391 90.227 84.168 1.00 21.46 C
ATOM 10 O3' A A 899 40.656 88.907 84.598 1.00 24.05 O
ATOM 11 C2' A A 899 40.974 90.549 82.803 1.00 21.56 C
ATOM 12 O2' A A 899 40.860 89.476 81.894 1.00 21.35 O
ATOM 13 C1' A A 899 40.062 91.697 82.356 1.00 20.34 C
ATOM 14 N9 A A 899 40.520 93.032 82.756 1.00 21.89 N
ATOM 15 C8 A A 899 39.819 93.961 83.490 1.00 20.18 C
ATOM 16 N7 A A 899 40.469 95.078 83.691 1.00 22.43 N
ATOM 17 C5 A A 899 41.684 94.879 83.047 1.00 22.08 C
ATOM 18 C6 A A 899 42.817 95.705 82.878 1.00 20.77 C
ATOM 19 N6 A A 899 42.908 96.947 83.353 1.00 21.99 N
ATOM 20 N1 A A 899 43.860 95.204 82.190 1.00 19.71 N
ATOM 21 C2 A A 899 43.763 93.965 81.693 1.00 22.51 C
ATOM 22 N3 A A 899 42.753 93.098 81.772 1.00 23.30 N
ATOM 23 C4 A A 899 41.732 93.620 82.473 1.00 21.98 C
ATOM 24 P A A 900 41.704 88.659 85.783 1.00 26.39 P
ATOM 25 OP1 A A 900 41.819 87.193 85.968 1.00 27.40 O
ATOM 26 OP2 A A 900 41.322 89.525 86.929 1.00 24.77 O
ATOM 27 O5' A A 900 43.084 89.176 85.180 1.00 28.21 O
TER

ATOM 1 O3' U B1000 45.832 98.163 77.794 1.00 20.82 O
ATOM 2 P U B1001 47.325 98.309 78.385 1.00 21.13 P
ATOM 3 OP1 U B1001 47.289 99.489 79.266 1.00 21.82 O
ATOM 4 OP2 U B1001 48.301 98.247 77.277 1.00 21.17 O
ATOM 5 O5' U B1001 47.543 97.025 79.304 1.00 23.13 O
ATOM 6 C5' U B1001 46.768 96.824 80.509 1.00 22.15 C
ATOM 7 C4' U B1001 47.145 95.510 81.155 1.00 21.53 C
ATOM 8 O4' U B1001 46.816 94.399 80.272 1.00 23.00 O
ATOM 9 C3' U B1001 48.631 95.349 81.403 1.00 21.01 C
ATOM 10 O3' U B1001 49.009 96.004 82.599 1.00 22.14 O
ATOM 11 C2' U B1001 48.795 93.838 81.471 1.00 22.17 C
ATOM 12 O2' U B1001 48.452 93.296 82.731 1.00 23.37 O
ATOM 13 C1' U B1001 47.799 93.380 80.402 1.00 18.89 C
ATOM 14 N1 U B1001 48.435 93.168 79.092 1.00 18.49 N
ATOM 15 C2 U B1001 49.096 91.966 78.889 1.00 18.83 C
ATOM 16 O2 U B1001 49.161 91.095 79.738 1.00 22.31 O
ATOM 17 N3 U B1001 49.683 91.824 77.656 1.00 17.16 N
ATOM 18 C4 U B1001 49.682 92.747 76.617 1.00 19.54 C
ATOM 19 O4 U B1001 50.257 92.470 75.557 1.00 19.60 O
ATOM 20 C5 U B1001 48.977 93.967 76.901 1.00 14.65 C
ATOM 21 C6 U B1001 48.391 94.131 78.095 1.00 17.59 C
ATOM 22 P C B1002 50.503 96.549 82.764 1.00 22.19 P
ATOM 23 OP1 C B1002 50.559 97.216 84.087 1.00 21.19 O
ATOM 24 OP2 C B1002 50.872 97.306 81.541 1.00 21.39 O
ATOM 25 O5' C B1002 51.387 95.224 82.832 1.00 18.91 O
TER

Atoms:
OP1: (36.153,88.949,85.635)
OP2: (34.452,90.874,85.533)
C3': (40.391,90.227,84.168)
C1': (40.062,91.697,82.356)
C5': (38.184,90.852,85.226)
O4': (38.799,91.479,82.962)
C8: (39.819,93.961,83.490)
O2': (40.860,89.476,81.894)
C6: (42.817,95.705,82.878)
C5: (41.684,94.879,83.047)
C4: (41.732,93.620,82.473)
P: (35.645,90.170,84.978)
C4': (38.905,90.436,83.965)
C2': (40.974,90.549,82.803)
C2: (43.763,93.965,81.693)
N1: (43.860,95.204,82.190)
N3: (42.753,93.098,81.772)
N6: (42.908,96.947,83.353)
N7: (40.469,95.078,83.691)
N9: (40.520,93.032,82.756)
O5': (36.835,91.236,84.927)
O3': (40.656,88.907,84.598)
C4: (49.682,92.747,76.617)
N3: (49.683,91.824,77.656)
OP1: (47.289,99.489,79.266)
OP2: (48.301,98.247,77.277)
C2: (49.096,91.966,78.889)
C1': (47.799,93.380,80.402)
C3': (48.631,95.349,81.403)
O5': (47.543,97.025,79.304)
O4': (46.816,94.399,80.272)
C5': (46.768,96.824,80.509)
P: (47.325,98.309,78.385)
C4': (47.145,95.510,81.155)
C2': (48.795,93.838,81.471)
O2': (48.452,93.296,82.731)
N1: (48.435,93.168,79.092)
O4: (50.257,92.470,75.557)
O2: (49.161,91.095,79.738)
C6: (48.391,94.131,78.095)
C5: (48.977,93.967,76.901)
O3': (49.009,96.004,82.599)
Image (generated by PyMOL):
PyMOL image
show in jmol