ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J01:A162:A449

Extra

PDB:
ATOM 1 O3' G A 161 3.129 173.198 173.056 1.00 33.21 O
ATOM 2 P A A 162 1.953 172.220 172.587 1.00 37.59 P
ATOM 3 OP1 A A 162 2.518 170.856 172.524 1.00 36.81 O
ATOM 4 OP2 A A 162 1.286 172.791 171.389 1.00 36.89 O
ATOM 5 O5' A A 162 0.910 172.303 173.778 1.00 45.73 O
ATOM 6 C5' A A 162 0.805 171.260 174.754 1.00 45.73 C
ATOM 7 C4' A A 162 -0.236 171.637 175.769 1.00 45.73 C
ATOM 8 O4' A A 162 0.291 172.646 176.664 1.00 45.73 O
ATOM 9 C3' A A 162 -1.447 172.269 175.121 1.00 45.73 C
ATOM 10 O3' A A 162 -2.330 171.247 174.708 1.00 45.73 O
ATOM 11 C2' A A 162 -1.983 173.192 176.210 1.00 45.73 C
ATOM 12 O2' A A 162 -2.797 172.517 177.146 1.00 45.73 O
ATOM 13 C1' A A 162 -0.692 173.632 176.911 1.00 45.73 C
ATOM 14 N9 A A 162 -0.144 174.929 176.495 1.00 32.57 N
ATOM 15 C8 A A 162 1.018 175.163 175.797 1.00 32.73 C
ATOM 16 N7 A A 162 1.274 176.434 175.606 1.00 32.88 N
ATOM 17 C5 A A 162 0.206 177.082 176.210 1.00 32.82 C
ATOM 18 C6 A A 162 -0.111 178.440 176.360 1.00 32.75 C
ATOM 19 N6 A A 162 0.653 179.436 175.919 1.00 32.69 N
ATOM 20 N1 A A 162 -1.252 178.748 176.997 1.00 32.68 N
ATOM 21 C2 A A 162 -2.009 177.758 177.465 1.00 32.65 C
ATOM 22 N3 A A 162 -1.819 176.449 177.398 1.00 32.56 N
ATOM 23 C4 A A 162 -0.679 176.170 176.749 1.00 32.66 C
ATOM 24 P A A 163 -3.240 171.463 173.409 1.00 52.03 P
ATOM 25 OP1 A A 163 -3.442 170.133 172.772 1.00 57.74 O
ATOM 26 OP2 A A 163 -2.708 172.596 172.595 1.00 57.83 O
ATOM 27 O5' A A 163 -4.628 171.881 174.053 1.00 23.21 O
TER

ATOM 1 O3' C B 448 -7.845 177.789 178.581 1.00 6.69 O
ATOM 2 P U B 449 -7.819 177.255 180.103 1.00 54.94 P
ATOM 3 OP1 U B 449 -8.359 175.869 180.087 1.00 30.84 O
ATOM 4 OP2 U B 449 -8.423 178.261 181.009 1.00 30.84 O
ATOM 5 O5' U B 449 -6.272 177.134 180.435 1.00 19.86 O
ATOM 6 C5' U B 449 -5.407 176.312 179.633 1.00 19.86 C
ATOM 7 C4' U B 449 -3.979 176.534 180.054 1.00 19.86 C
ATOM 8 O4' U B 449 -3.683 177.942 179.868 1.00 19.86 O
ATOM 9 C3' U B 449 -3.708 176.229 181.528 1.00 19.86 C
ATOM 10 O3' U B 449 -2.338 175.868 181.684 1.00 19.86 O
ATOM 11 C2' U B 449 -3.875 177.590 182.188 1.00 19.86 C
ATOM 12 O2' U B 449 -3.119 177.722 183.374 1.00 19.86 O
ATOM 13 C1' U B 449 -3.325 178.514 181.101 1.00 19.86 C
ATOM 14 N1 U B 449 -3.838 179.885 181.141 1.00 16.42 N
ATOM 15 C2 U B 449 -2.920 180.890 181.071 1.00 16.42 C
ATOM 16 O2 U B 449 -1.733 180.680 180.956 1.00 16.42 O
ATOM 17 N3 U B 449 -3.437 182.153 181.150 1.00 16.42 N
ATOM 18 C4 U B 449 -4.763 182.492 181.299 1.00 16.42 C
ATOM 19 O4 U B 449 -5.071 183.667 181.480 1.00 16.42 O
ATOM 20 C5 U B 449 -5.657 181.386 181.340 1.00 16.42 C
ATOM 21 C6 U B 449 -5.176 180.152 181.259 1.00 16.42 C
ATOM 22 P C B 450 -1.879 174.359 181.462 1.00 32.49 P
ATOM 23 OP1 C B 450 -2.544 173.887 180.210 1.00 32.92 O
ATOM 24 OP2 C B 450 -2.082 173.621 182.744 1.00 32.92 O
ATOM 25 O5' C B 450 -0.318 174.460 181.171 1.00 8.12 O
TER

Atoms:
OP1: (2.518,170.856,172.524)
OP2: (1.286,172.791,171.389)
C3': (-1.447,172.269,175.121)
C1': (-0.692,173.632,176.911)
C5': (0.805,171.260,174.754)
O4': (0.291,172.646,176.664)
C8: (1.018,175.163,175.797)
O2': (-2.797,172.517,177.146)
C6: (-0.111,178.440,176.360)
C5: (0.206,177.082,176.210)
C4: (-0.679,176.170,176.749)
P: (1.953,172.220,172.587)
C4': (-0.236,171.637,175.769)
C2': (-1.983,173.192,176.210)
C2: (-2.009,177.758,177.465)
N1: (-1.252,178.748,176.997)
N3: (-1.819,176.449,177.398)
N6: (0.653,179.436,175.919)
N7: (1.274,176.434,175.606)
N9: (-0.144,174.929,176.495)
O5': (0.910,172.303,173.778)
O3': (-2.330,171.247,174.708)
C4: (-4.763,182.492,181.299)
N3: (-3.437,182.153,181.150)
OP1: (-8.359,175.869,180.087)
OP2: (-8.423,178.261,181.009)
C2: (-2.920,180.890,181.071)
C1': (-3.325,178.514,181.101)
C3': (-3.708,176.229,181.528)
O5': (-6.272,177.134,180.435)
O4': (-3.683,177.942,179.868)
C5': (-5.407,176.312,179.633)
P: (-7.819,177.255,180.103)
C4': (-3.979,176.534,180.054)
C2': (-3.875,177.590,182.188)
O2': (-3.119,177.722,183.374)
N1: (-3.838,179.885,181.141)
O4: (-5.071,183.667,181.480)
O2: (-1.733,180.680,180.956)
C6: (-5.176,180.152,181.259)
C5: (-5.657,181.386,181.340)
O3': (-2.338,175.868,181.684)
Image (generated by PyMOL):
PyMOL image
show in jmol