Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01538:01603
Extra
PDB:
ATOM 1 O3' C A1537 119.443 188.555 64.637 1.00 55.45 O
ATOM 2 P A A1538 120.877 188.727 65.321 1.00 56.92 P
ATOM 3 OP1 A A1538 121.320 190.126 65.089 1.00 57.82 O
ATOM 4 OP2 A A1538 121.740 187.592 64.883 1.00 53.07 O
ATOM 5 O5' A A1538 120.563 188.605 66.875 1.00 57.02 O
ATOM 6 C5' A A1538 121.112 187.538 67.634 1.00 58.46 C
ATOM 7 C4' A A1538 120.089 186.976 68.583 1.00 60.90 C
ATOM 8 O4' A A1538 118.733 187.123 68.076 1.00 61.49 O
ATOM 9 C3' A A1538 120.288 185.489 68.757 1.00 62.22 C
ATOM 10 O3' A A1538 121.316 185.232 69.690 1.00 62.07 O
ATOM 11 C2' A A1538 118.890 184.989 69.079 1.00 61.48 C
ATOM 12 O2' A A1538 118.507 185.217 70.420 1.00 62.96 O
ATOM 13 C1' A A1538 118.055 185.877 68.152 1.00 60.12 C
ATOM 14 N9 A A1538 117.915 185.374 66.781 1.00 59.93 N
ATOM 15 C8 A A1538 118.170 186.090 65.638 1.00 59.40 C
ATOM 16 N7 A A1538 117.935 185.431 64.533 1.00 59.65 N
ATOM 17 C5 A A1538 117.500 184.190 64.970 1.00 58.54 C
ATOM 18 C6 A A1538 117.085 183.041 64.277 1.00 56.81 C
ATOM 19 N6 A A1538 117.027 182.960 62.942 1.00 53.76 N
ATOM 20 N1 A A1538 116.724 181.967 65.008 1.00 56.04 N
ATOM 21 C2 A A1538 116.773 182.054 66.343 1.00 56.20 C
ATOM 22 N3 A A1538 117.135 183.077 67.109 1.00 58.24 N
ATOM 23 C4 A A1538 117.493 184.132 66.354 1.00 59.47 C
ATOM 24 P A A1539 122.644 184.483 69.194 1.00 64.14 P
ATOM 25 OP1 A A1539 123.667 184.582 70.266 1.00 64.25 O
ATOM 26 OP2 A A1539 122.966 184.955 67.822 1.00 62.58 O
ATOM 27 O5' A A1539 122.168 182.972 69.067 1.00 63.87 O
TER
ATOM 1 O3' C B1602 110.679 178.578 63.778 1.00 52.66 O
ATOM 2 P U B1603 111.502 177.214 63.623 1.00 53.88 P
ATOM 3 OP1 U B1603 111.992 177.128 62.220 1.00 52.99 O
ATOM 4 OP2 U B1603 110.682 176.109 64.187 1.00 55.00 O
ATOM 5 O5' U B1603 112.760 177.446 64.566 1.00 53.27 O
ATOM 6 C5' U B1603 113.688 178.501 64.283 1.00 51.85 C
ATOM 7 C4' U B1603 114.717 178.599 65.376 1.00 49.96 C
ATOM 8 O4' U B1603 114.102 179.048 66.609 1.00 49.47 O
ATOM 9 C3' U B1603 115.379 177.295 65.765 1.00 49.03 C
ATOM 10 O3' U B1603 116.381 176.942 64.830 1.00 48.57 O
ATOM 11 C2' U B1603 115.930 177.627 67.143 1.00 50.55 C
ATOM 12 O2' U B1603 117.110 178.399 67.098 1.00 50.10 O
ATOM 13 C1' U B1603 114.804 178.493 67.709 1.00 51.92 C
ATOM 14 N1 U B1603 113.867 177.730 68.548 1.00 53.89 N
ATOM 15 C2 U B1603 114.287 177.393 69.821 1.00 55.92 C
ATOM 16 O2 U B1603 115.377 177.710 70.268 1.00 58.19 O
ATOM 17 N3 U B1603 113.385 176.667 70.556 1.00 58.22 N
ATOM 18 C4 U B1603 112.135 176.251 70.161 1.00 56.81 C
ATOM 19 O4 U B1603 111.452 175.582 70.935 1.00 56.65 O
ATOM 20 C5 U B1603 111.766 176.644 68.837 1.00 57.05 C
ATOM 21 C6 U B1603 112.624 177.353 68.094 1.00 56.12 C
ATOM 22 P G B1604 117.195 175.578 65.022 1.00 49.35 P
ATOM 23 OP1 G B1604 118.028 175.365 63.810 1.00 47.47 O
ATOM 24 OP2 G B1604 116.265 174.511 65.470 1.00 50.24 O
ATOM 25 O5' G B1604 118.153 175.910 66.241 1.00 49.72 O
TER
ATOM 2 P A A1538 120.877 188.727 65.321 1.00 56.92 P
ATOM 3 OP1 A A1538 121.320 190.126 65.089 1.00 57.82 O
ATOM 4 OP2 A A1538 121.740 187.592 64.883 1.00 53.07 O
ATOM 5 O5' A A1538 120.563 188.605 66.875 1.00 57.02 O
ATOM 6 C5' A A1538 121.112 187.538 67.634 1.00 58.46 C
ATOM 7 C4' A A1538 120.089 186.976 68.583 1.00 60.90 C
ATOM 8 O4' A A1538 118.733 187.123 68.076 1.00 61.49 O
ATOM 9 C3' A A1538 120.288 185.489 68.757 1.00 62.22 C
ATOM 10 O3' A A1538 121.316 185.232 69.690 1.00 62.07 O
ATOM 11 C2' A A1538 118.890 184.989 69.079 1.00 61.48 C
ATOM 12 O2' A A1538 118.507 185.217 70.420 1.00 62.96 O
ATOM 13 C1' A A1538 118.055 185.877 68.152 1.00 60.12 C
ATOM 14 N9 A A1538 117.915 185.374 66.781 1.00 59.93 N
ATOM 15 C8 A A1538 118.170 186.090 65.638 1.00 59.40 C
ATOM 16 N7 A A1538 117.935 185.431 64.533 1.00 59.65 N
ATOM 17 C5 A A1538 117.500 184.190 64.970 1.00 58.54 C
ATOM 18 C6 A A1538 117.085 183.041 64.277 1.00 56.81 C
ATOM 19 N6 A A1538 117.027 182.960 62.942 1.00 53.76 N
ATOM 20 N1 A A1538 116.724 181.967 65.008 1.00 56.04 N
ATOM 21 C2 A A1538 116.773 182.054 66.343 1.00 56.20 C
ATOM 22 N3 A A1538 117.135 183.077 67.109 1.00 58.24 N
ATOM 23 C4 A A1538 117.493 184.132 66.354 1.00 59.47 C
ATOM 24 P A A1539 122.644 184.483 69.194 1.00 64.14 P
ATOM 25 OP1 A A1539 123.667 184.582 70.266 1.00 64.25 O
ATOM 26 OP2 A A1539 122.966 184.955 67.822 1.00 62.58 O
ATOM 27 O5' A A1539 122.168 182.972 69.067 1.00 63.87 O
TER
ATOM 1 O3' C B1602 110.679 178.578 63.778 1.00 52.66 O
ATOM 2 P U B1603 111.502 177.214 63.623 1.00 53.88 P
ATOM 3 OP1 U B1603 111.992 177.128 62.220 1.00 52.99 O
ATOM 4 OP2 U B1603 110.682 176.109 64.187 1.00 55.00 O
ATOM 5 O5' U B1603 112.760 177.446 64.566 1.00 53.27 O
ATOM 6 C5' U B1603 113.688 178.501 64.283 1.00 51.85 C
ATOM 7 C4' U B1603 114.717 178.599 65.376 1.00 49.96 C
ATOM 8 O4' U B1603 114.102 179.048 66.609 1.00 49.47 O
ATOM 9 C3' U B1603 115.379 177.295 65.765 1.00 49.03 C
ATOM 10 O3' U B1603 116.381 176.942 64.830 1.00 48.57 O
ATOM 11 C2' U B1603 115.930 177.627 67.143 1.00 50.55 C
ATOM 12 O2' U B1603 117.110 178.399 67.098 1.00 50.10 O
ATOM 13 C1' U B1603 114.804 178.493 67.709 1.00 51.92 C
ATOM 14 N1 U B1603 113.867 177.730 68.548 1.00 53.89 N
ATOM 15 C2 U B1603 114.287 177.393 69.821 1.00 55.92 C
ATOM 16 O2 U B1603 115.377 177.710 70.268 1.00 58.19 O
ATOM 17 N3 U B1603 113.385 176.667 70.556 1.00 58.22 N
ATOM 18 C4 U B1603 112.135 176.251 70.161 1.00 56.81 C
ATOM 19 O4 U B1603 111.452 175.582 70.935 1.00 56.65 O
ATOM 20 C5 U B1603 111.766 176.644 68.837 1.00 57.05 C
ATOM 21 C6 U B1603 112.624 177.353 68.094 1.00 56.12 C
ATOM 22 P G B1604 117.195 175.578 65.022 1.00 49.35 P
ATOM 23 OP1 G B1604 118.028 175.365 63.810 1.00 47.47 O
ATOM 24 OP2 G B1604 116.265 174.511 65.470 1.00 50.24 O
ATOM 25 O5' G B1604 118.153 175.910 66.241 1.00 49.72 O
TER
Atoms:
OP1: (121.320,190.126,65.089)
OP2: (121.740,187.592,64.883)
C3': (120.288,185.489,68.757)
C1': (118.055,185.877,68.152)
C5': (121.112,187.538,67.634)
O4': (118.733,187.123,68.076)
C8: (118.170,186.090,65.638)
O2': (118.507,185.217,70.420)
C6: (117.085,183.041,64.277)
C5: (117.500,184.190,64.970)
C4: (117.493,184.132,66.354)
P: (120.877,188.727,65.321)
C4': (120.089,186.976,68.583)
C2': (118.890,184.989,69.079)
C2: (116.773,182.054,66.343)
N1: (116.724,181.967,65.008)
N3: (117.135,183.077,67.109)
N6: (117.027,182.960,62.942)
N7: (117.935,185.431,64.533)
N9: (117.915,185.374,66.781)
O5': (120.563,188.605,66.875)
O3': (121.316,185.232,69.690)
OP2: (121.740,187.592,64.883)
C3': (120.288,185.489,68.757)
C1': (118.055,185.877,68.152)
C5': (121.112,187.538,67.634)
O4': (118.733,187.123,68.076)
C8: (118.170,186.090,65.638)
O2': (118.507,185.217,70.420)
C6: (117.085,183.041,64.277)
C5: (117.500,184.190,64.970)
C4: (117.493,184.132,66.354)
P: (120.877,188.727,65.321)
C4': (120.089,186.976,68.583)
C2': (118.890,184.989,69.079)
C2: (116.773,182.054,66.343)
N1: (116.724,181.967,65.008)
N3: (117.135,183.077,67.109)
N6: (117.027,182.960,62.942)
N7: (117.935,185.431,64.533)
N9: (117.915,185.374,66.781)
O5': (120.563,188.605,66.875)
O3': (121.316,185.232,69.690)
C4: (112.135,176.251,70.161)
N3: (113.385,176.667,70.556)
OP1: (111.992,177.128,62.220)
OP2: (110.682,176.109,64.187)
C2: (114.287,177.393,69.821)
C1': (114.804,178.493,67.709)
C3': (115.379,177.295,65.765)
O5': (112.760,177.446,64.566)
O4': (114.102,179.048,66.609)
C5': (113.688,178.501,64.283)
P: (111.502,177.214,63.623)
C4': (114.717,178.599,65.376)
C2': (115.930,177.627,67.143)
O2': (117.110,178.399,67.098)
N1: (113.867,177.730,68.548)
O4: (111.452,175.582,70.935)
O2: (115.377,177.710,70.268)
C6: (112.624,177.353,68.094)
C5: (111.766,176.644,68.837)
O3': (116.381,176.942,64.830)
N3: (113.385,176.667,70.556)
OP1: (111.992,177.128,62.220)
OP2: (110.682,176.109,64.187)
C2: (114.287,177.393,69.821)
C1': (114.804,178.493,67.709)
C3': (115.379,177.295,65.765)
O5': (112.760,177.446,64.566)
O4': (114.102,179.048,66.609)
C5': (113.688,178.501,64.283)
P: (111.502,177.214,63.623)
C4': (114.717,178.599,65.376)
C2': (115.930,177.627,67.143)
O2': (117.110,178.399,67.098)
N1: (113.867,177.730,68.548)
O4: (111.452,175.582,70.935)
O2: (115.377,177.710,70.268)
C6: (112.624,177.353,68.094)
C5: (111.766,176.644,68.837)
O3': (116.381,176.942,64.830)
Image (generated by PyMOL):