Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A533:A534
Extra
PDB:
ATOM 1 O3' U A 532 55.932-105.225 -5.179 1.00 43.69 O
ATOM 2 P G A 533 57.001-105.885 -4.192 1.00 35.11 P
ATOM 3 OP1 G A 533 56.246-106.349 -2.981 1.00 31.15 O
ATOM 4 OP2 G A 533 58.102-104.893 -4.023 1.00 34.61 O
ATOM 5 O5' G A 533 57.513-107.139 -5.018 1.00 31.84 O
ATOM 6 C5' G A 533 56.699-108.287 -5.174 1.00 30.50 C
ATOM 7 C4' G A 533 57.370-109.326 -6.028 1.00 30.72 C
ATOM 8 O4' G A 533 57.643-108.781 -7.343 1.00 35.31 O
ATOM 9 C3' G A 533 58.727-109.782 -5.548 1.00 38.51 C
ATOM 10 O3' G A 533 58.654-110.707 -4.492 1.00 43.32 O
ATOM 11 C2' G A 533 59.371-110.319 -6.820 1.00 35.81 C
ATOM 12 O2' G A 533 58.863-111.599 -7.154 1.00 30.65 O
ATOM 13 C1' G A 533 58.849-109.321 -7.848 1.00 37.01 C
ATOM 14 N9 G A 533 59.803-108.219 -8.081 1.00 29.97 N
ATOM 15 C8 G A 533 59.753-106.945 -7.578 1.00 33.57 C
ATOM 16 N7 G A 533 60.760-106.204 -7.968 1.00 39.53 N
ATOM 17 C5 G A 533 61.514-107.042 -8.791 1.00 40.75 C
ATOM 18 C6 G A 533 62.725-106.822 -9.511 1.00 38.43 C
ATOM 19 O6 G A 533 63.412-105.807 -9.584 1.00 36.20 O
ATOM 20 N1 G A 533 63.133-107.944 -10.199 1.00 34.99 N
ATOM 21 C2 G A 533 62.457-109.128 -10.185 1.00 40.52 C
ATOM 22 N2 G A 533 62.984-110.118 -10.903 1.00 40.83 N
ATOM 23 N3 G A 533 61.339-109.350 -9.536 1.00 40.29 N
ATOM 24 C4 G A 533 60.925-108.278 -8.864 1.00 32.95 C
ATOM 25 P G A 534 59.829-110.773 -3.415 1.00 38.00 P
ATOM 26 OP1 G A 534 59.391-111.693 -2.337 1.00 66.31 O
ATOM 27 OP2 G A 534 60.176-109.380 -3.060 1.00 56.85 O
ATOM 28 O5' G A 534 60.992-111.443 -4.252 1.00 34.05 O
TER
ATOM 1 O3' G B 533 58.654-110.707 -4.492 1.00 43.32 O
ATOM 2 P G B 534 59.829-110.773 -3.415 1.00 38.00 P
ATOM 3 OP1 G B 534 59.391-111.693 -2.337 1.00 66.31 O
ATOM 4 OP2 G B 534 60.176-109.380 -3.060 1.00 56.85 O
ATOM 5 O5' G B 534 60.992-111.443 -4.252 1.00 34.05 O
ATOM 6 C5' G B 534 60.964-112.828 -4.539 1.00 34.69 C
ATOM 7 C4' G B 534 62.046-113.217 -5.513 1.00 40.73 C
ATOM 8 O4' G B 534 62.035-112.321 -6.640 1.00 49.08 O
ATOM 9 C3' G B 534 63.466-113.140 -4.996 1.00 35.53 C
ATOM 10 O3' G B 534 63.819-114.274 -4.253 1.00 41.59 O
ATOM 11 C2' G B 534 64.274-112.992 -6.266 1.00 42.87 C
ATOM 12 O2' G B 534 64.434-114.249 -6.898 1.00 44.67 O
ATOM 13 C1' G B 534 63.346-112.133 -7.119 1.00 44.91 C
ATOM 14 N9 G B 534 63.671-110.704 -7.012 1.00 38.27 N
ATOM 15 C8 G B 534 62.959-109.786 -6.314 1.00 36.07 C
ATOM 16 N7 G B 534 63.476-108.602 -6.379 1.00 40.52 N
ATOM 17 C5 G B 534 64.596-108.734 -7.174 1.00 45.47 C
ATOM 18 C6 G B 534 65.560-107.768 -7.586 1.00 44.08 C
ATOM 19 O6 G B 534 65.625-106.557 -7.332 1.00 34.92 O
ATOM 20 N1 G B 534 66.522-108.361 -8.387 1.00 36.82 N
ATOM 21 C2 G B 534 66.551-109.689 -8.724 1.00 35.50 C
ATOM 22 N2 G B 534 67.549-110.079 -9.503 1.00 45.65 N
ATOM 23 N3 G B 534 65.680-110.590 -8.345 1.00 38.67 N
ATOM 24 C4 G B 534 64.724-110.041 -7.579 1.00 42.56 C
ATOM 25 P G B 535 64.887-114.155 -3.090 1.00 37.65 P
ATOM 26 OP1 G B 535 64.805-115.403 -2.300 1.00 56.06 O
ATOM 27 OP2 G B 535 64.658-112.872 -2.411 1.00 54.33 O
ATOM 28 O5' G B 535 66.241-114.101 -3.900 1.00 40.06 O
TER
ATOM 2 P G A 533 57.001-105.885 -4.192 1.00 35.11 P
ATOM 3 OP1 G A 533 56.246-106.349 -2.981 1.00 31.15 O
ATOM 4 OP2 G A 533 58.102-104.893 -4.023 1.00 34.61 O
ATOM 5 O5' G A 533 57.513-107.139 -5.018 1.00 31.84 O
ATOM 6 C5' G A 533 56.699-108.287 -5.174 1.00 30.50 C
ATOM 7 C4' G A 533 57.370-109.326 -6.028 1.00 30.72 C
ATOM 8 O4' G A 533 57.643-108.781 -7.343 1.00 35.31 O
ATOM 9 C3' G A 533 58.727-109.782 -5.548 1.00 38.51 C
ATOM 10 O3' G A 533 58.654-110.707 -4.492 1.00 43.32 O
ATOM 11 C2' G A 533 59.371-110.319 -6.820 1.00 35.81 C
ATOM 12 O2' G A 533 58.863-111.599 -7.154 1.00 30.65 O
ATOM 13 C1' G A 533 58.849-109.321 -7.848 1.00 37.01 C
ATOM 14 N9 G A 533 59.803-108.219 -8.081 1.00 29.97 N
ATOM 15 C8 G A 533 59.753-106.945 -7.578 1.00 33.57 C
ATOM 16 N7 G A 533 60.760-106.204 -7.968 1.00 39.53 N
ATOM 17 C5 G A 533 61.514-107.042 -8.791 1.00 40.75 C
ATOM 18 C6 G A 533 62.725-106.822 -9.511 1.00 38.43 C
ATOM 19 O6 G A 533 63.412-105.807 -9.584 1.00 36.20 O
ATOM 20 N1 G A 533 63.133-107.944 -10.199 1.00 34.99 N
ATOM 21 C2 G A 533 62.457-109.128 -10.185 1.00 40.52 C
ATOM 22 N2 G A 533 62.984-110.118 -10.903 1.00 40.83 N
ATOM 23 N3 G A 533 61.339-109.350 -9.536 1.00 40.29 N
ATOM 24 C4 G A 533 60.925-108.278 -8.864 1.00 32.95 C
ATOM 25 P G A 534 59.829-110.773 -3.415 1.00 38.00 P
ATOM 26 OP1 G A 534 59.391-111.693 -2.337 1.00 66.31 O
ATOM 27 OP2 G A 534 60.176-109.380 -3.060 1.00 56.85 O
ATOM 28 O5' G A 534 60.992-111.443 -4.252 1.00 34.05 O
TER
ATOM 1 O3' G B 533 58.654-110.707 -4.492 1.00 43.32 O
ATOM 2 P G B 534 59.829-110.773 -3.415 1.00 38.00 P
ATOM 3 OP1 G B 534 59.391-111.693 -2.337 1.00 66.31 O
ATOM 4 OP2 G B 534 60.176-109.380 -3.060 1.00 56.85 O
ATOM 5 O5' G B 534 60.992-111.443 -4.252 1.00 34.05 O
ATOM 6 C5' G B 534 60.964-112.828 -4.539 1.00 34.69 C
ATOM 7 C4' G B 534 62.046-113.217 -5.513 1.00 40.73 C
ATOM 8 O4' G B 534 62.035-112.321 -6.640 1.00 49.08 O
ATOM 9 C3' G B 534 63.466-113.140 -4.996 1.00 35.53 C
ATOM 10 O3' G B 534 63.819-114.274 -4.253 1.00 41.59 O
ATOM 11 C2' G B 534 64.274-112.992 -6.266 1.00 42.87 C
ATOM 12 O2' G B 534 64.434-114.249 -6.898 1.00 44.67 O
ATOM 13 C1' G B 534 63.346-112.133 -7.119 1.00 44.91 C
ATOM 14 N9 G B 534 63.671-110.704 -7.012 1.00 38.27 N
ATOM 15 C8 G B 534 62.959-109.786 -6.314 1.00 36.07 C
ATOM 16 N7 G B 534 63.476-108.602 -6.379 1.00 40.52 N
ATOM 17 C5 G B 534 64.596-108.734 -7.174 1.00 45.47 C
ATOM 18 C6 G B 534 65.560-107.768 -7.586 1.00 44.08 C
ATOM 19 O6 G B 534 65.625-106.557 -7.332 1.00 34.92 O
ATOM 20 N1 G B 534 66.522-108.361 -8.387 1.00 36.82 N
ATOM 21 C2 G B 534 66.551-109.689 -8.724 1.00 35.50 C
ATOM 22 N2 G B 534 67.549-110.079 -9.503 1.00 45.65 N
ATOM 23 N3 G B 534 65.680-110.590 -8.345 1.00 38.67 N
ATOM 24 C4 G B 534 64.724-110.041 -7.579 1.00 42.56 C
ATOM 25 P G B 535 64.887-114.155 -3.090 1.00 37.65 P
ATOM 26 OP1 G B 535 64.805-115.403 -2.300 1.00 56.06 O
ATOM 27 OP2 G B 535 64.658-112.872 -2.411 1.00 54.33 O
ATOM 28 O5' G B 535 66.241-114.101 -3.900 1.00 40.06 O
TER
Atoms:
OP1: (56.246,-106.349,-2.981)
OP2: (58.102,-104.893,-4.023)
C3': (58.727,-109.782,-5.548)
C1': (58.849,-109.321,-7.848)
C5': (56.699,-108.287,-5.174)
O6: (63.412,-105.807,-9.584)
O4': (57.643,-108.781,-7.343)
C8: (59.753,-106.945,-7.578)
C2: (62.457,-109.128,-10.185)
C6: (62.725,-106.822,-9.511)
C5: (61.514,-107.042,-8.791)
C4: (60.925,-108.278,-8.864)
P: (57.001,-105.885,-4.192)
C4': (57.370,-109.326,-6.028)
C2': (59.371,-110.319,-6.820)
O2': (58.863,-111.599,-7.154)
N1: (63.133,-107.944,-10.199)
N2: (62.984,-110.118,-10.903)
N3: (61.339,-109.350,-9.536)
N7: (60.760,-106.204,-7.968)
N9: (59.803,-108.219,-8.081)
O5': (57.513,-107.139,-5.018)
O3': (58.654,-110.707,-4.492)
OP2: (58.102,-104.893,-4.023)
C3': (58.727,-109.782,-5.548)
C1': (58.849,-109.321,-7.848)
C5': (56.699,-108.287,-5.174)
O6: (63.412,-105.807,-9.584)
O4': (57.643,-108.781,-7.343)
C8: (59.753,-106.945,-7.578)
C2: (62.457,-109.128,-10.185)
C6: (62.725,-106.822,-9.511)
C5: (61.514,-107.042,-8.791)
C4: (60.925,-108.278,-8.864)
P: (57.001,-105.885,-4.192)
C4': (57.370,-109.326,-6.028)
C2': (59.371,-110.319,-6.820)
O2': (58.863,-111.599,-7.154)
N1: (63.133,-107.944,-10.199)
N2: (62.984,-110.118,-10.903)
N3: (61.339,-109.350,-9.536)
N7: (60.760,-106.204,-7.968)
N9: (59.803,-108.219,-8.081)
O5': (57.513,-107.139,-5.018)
O3': (58.654,-110.707,-4.492)
OP1: (59.391,-111.693,-2.337)
OP2: (60.176,-109.380,-3.060)
C3': (63.466,-113.140,-4.996)
C1': (63.346,-112.133,-7.119)
C5': (60.964,-112.828,-4.539)
O6: (65.625,-106.557,-7.332)
O4': (62.035,-112.321,-6.640)
C8: (62.959,-109.786,-6.314)
C2: (66.551,-109.689,-8.724)
C6: (65.560,-107.768,-7.586)
C5: (64.596,-108.734,-7.174)
C4: (64.724,-110.041,-7.579)
P: (59.829,-110.773,-3.415)
C4': (62.046,-113.217,-5.513)
C2': (64.274,-112.992,-6.266)
O2': (64.434,-114.249,-6.898)
N1: (66.522,-108.361,-8.387)
N2: (67.549,-110.079,-9.503)
N3: (65.680,-110.590,-8.345)
N7: (63.476,-108.602,-6.379)
N9: (63.671,-110.704,-7.012)
O5': (60.992,-111.443,-4.252)
O3': (63.819,-114.274,-4.253)
OP2: (60.176,-109.380,-3.060)
C3': (63.466,-113.140,-4.996)
C1': (63.346,-112.133,-7.119)
C5': (60.964,-112.828,-4.539)
O6: (65.625,-106.557,-7.332)
O4': (62.035,-112.321,-6.640)
C8: (62.959,-109.786,-6.314)
C2: (66.551,-109.689,-8.724)
C6: (65.560,-107.768,-7.586)
C5: (64.596,-108.734,-7.174)
C4: (64.724,-110.041,-7.579)
P: (59.829,-110.773,-3.415)
C4': (62.046,-113.217,-5.513)
C2': (64.274,-112.992,-6.266)
O2': (64.434,-114.249,-6.898)
N1: (66.522,-108.361,-8.387)
N2: (67.549,-110.079,-9.503)
N3: (65.680,-110.590,-8.345)
N7: (63.476,-108.602,-6.379)
N9: (63.671,-110.704,-7.012)
O5': (60.992,-111.443,-4.252)
O3': (63.819,-114.274,-4.253)
Image (generated by PyMOL):