ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3I56:02001:02489

Extra

PDB:
ATOM 1 O3' A A2000 49.094 147.647 83.630 1.00 21.22 O
ATOM 2 P A A2001 48.373 146.248 83.913 1.00 22.79 P
ATOM 3 OP1 A A2001 48.038 145.645 82.595 1.00 21.71 O
ATOM 4 OP2 A A2001 47.298 146.480 84.921 1.00 21.91 O
ATOM 5 O5' A A2001 49.528 145.383 84.572 1.00 21.73 O
ATOM 6 C5' A A2001 50.808 145.317 83.943 1.00 20.90 C
ATOM 7 C4' A A2001 51.846 144.880 84.930 1.00 19.23 C
ATOM 8 O4' A A2001 51.880 145.810 86.038 1.00 16.55 O
ATOM 9 C3' A A2001 51.600 143.536 85.578 1.00 18.42 C
ATOM 10 O3' A A2001 52.040 142.493 84.722 1.00 19.33 O
ATOM 11 C2' A A2001 52.438 143.653 86.837 1.00 18.28 C
ATOM 12 O2' A A2001 53.815 143.501 86.562 1.00 16.48 O
ATOM 13 C1' A A2001 52.182 145.111 87.225 1.00 18.33 C
ATOM 14 N9 A A2001 51.059 145.295 88.141 1.00 21.08 N
ATOM 15 C8 A A2001 49.779 145.666 87.823 1.00 22.08 C
ATOM 16 N7 A A2001 48.996 145.798 88.862 1.00 23.46 N
ATOM 17 C5 A A2001 49.812 145.484 89.937 1.00 22.47 C
ATOM 18 C6 A A2001 49.580 145.451 91.317 1.00 23.49 C
ATOM 19 N6 A A2001 48.411 145.767 91.884 1.00 22.24 N
ATOM 20 N1 A A2001 50.604 145.085 92.111 1.00 23.93 N
ATOM 21 C2 A A2001 51.774 144.785 91.550 1.00 22.88 C
ATOM 22 N3 A A2001 52.117 144.789 90.273 1.00 21.96 N
ATOM 23 C4 A A2001 51.079 145.153 89.507 1.00 21.58 C
ATOM 24 P C A2002 51.408 141.027 84.863 1.00 21.44 P
ATOM 25 OP1 C A2002 52.017 140.201 83.786 1.00 19.58 O
ATOM 26 OP2 C A2002 49.933 141.157 84.946 1.00 20.60 O
ATOM 27 O5' C A2002 51.934 140.501 86.273 1.00 20.12 O
TER

ATOM 1 O3' C B2488 58.711 143.428 95.667 1.00 22.57 O
ATOM 2 P U B2489 58.658 144.419 96.926 1.00 20.54 P
ATOM 3 OP1 U B2489 59.644 145.474 96.644 1.00 22.83 O
ATOM 4 OP2 U B2489 58.742 143.649 98.189 1.00 21.70 O
ATOM 5 O5' U B2489 57.216 145.084 96.830 1.00 21.55 O
ATOM 6 C5' U B2489 56.809 146.088 97.766 1.00 21.56 C
ATOM 7 C4' U B2489 55.406 146.557 97.462 1.00 21.79 C
ATOM 8 O4' U B2489 55.397 147.335 96.235 1.00 23.07 O
ATOM 9 C3' U B2489 54.360 145.465 97.279 1.00 20.42 C
ATOM 10 O3' U B2489 53.116 145.952 97.743 1.00 22.57 O
ATOM 11 C2' U B2489 54.293 145.324 95.768 1.00 20.68 C
ATOM 12 O2' U B2489 53.054 144.832 95.311 1.00 20.68 O
ATOM 13 C1' U B2489 54.459 146.777 95.339 1.00 22.13 C
ATOM 14 N1 U B2489 54.953 146.933 93.967 1.00 22.68 N
ATOM 15 C2 U B2489 54.029 147.252 93.000 1.00 23.52 C
ATOM 16 O2 U B2489 52.844 147.399 93.239 1.00 24.91 O
ATOM 17 N3 U B2489 54.538 147.391 91.739 1.00 24.71 N
ATOM 18 C4 U B2489 55.850 147.248 91.357 1.00 25.44 C
ATOM 19 O4 U B2489 56.162 147.442 90.179 1.00 27.47 O
ATOM 20 C5 U B2489 56.744 146.910 92.418 1.00 24.99 C
ATOM 21 C6 U B2489 56.276 146.769 93.655 1.00 22.88 C
ATOM 22 P A B2490 52.579 145.497 99.178 1.00 25.08 P
ATOM 23 OP1 A B2490 52.258 146.722 99.922 1.00 27.25 O
ATOM 24 OP2 A B2490 53.514 144.511 99.759 1.00 27.28 O
ATOM 25 O5' A B2490 51.217 144.751 98.872 1.00 25.20 O
TER

Atoms:
OP1: (48.038,145.645,82.595)
OP2: (47.298,146.480,84.921)
C3': (51.600,143.536,85.578)
C1': (52.182,145.111,87.225)
C5': (50.808,145.317,83.943)
O4': (51.880,145.810,86.038)
C8: (49.779,145.666,87.823)
O2': (53.815,143.501,86.562)
C6: (49.580,145.451,91.317)
C5: (49.812,145.484,89.937)
C4: (51.079,145.153,89.507)
P: (48.373,146.248,83.913)
C4': (51.846,144.880,84.930)
C2': (52.438,143.653,86.837)
C2: (51.774,144.785,91.550)
N1: (50.604,145.085,92.111)
N3: (52.117,144.789,90.273)
N6: (48.411,145.767,91.884)
N7: (48.996,145.798,88.862)
N9: (51.059,145.295,88.141)
O5': (49.528,145.383,84.572)
O3': (52.040,142.493,84.722)
C4: (55.850,147.248,91.357)
N3: (54.538,147.391,91.739)
OP1: (59.644,145.474,96.644)
OP2: (58.742,143.649,98.189)
C2: (54.029,147.252,93.000)
C1': (54.459,146.777,95.339)
C3': (54.360,145.465,97.279)
O5': (57.216,145.084,96.830)
O4': (55.397,147.335,96.235)
C5': (56.809,146.088,97.766)
P: (58.658,144.419,96.926)
C4': (55.406,146.557,97.462)
C2': (54.293,145.324,95.768)
O2': (53.054,144.832,95.311)
N1: (54.953,146.933,93.967)
O4: (56.162,147.442,90.179)
O2: (52.844,147.399,93.239)
C6: (56.276,146.769,93.655)
C5: (56.744,146.910,92.418)
O3': (53.116,145.952,97.743)
Image (generated by PyMOL):
PyMOL image
show in jmol