ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A697:A787

Extra

PDB:
ATOM 1 O3' U A 696 -51.763 -40.025 20.337 1.00 0.79 O
ATOM 2 P A A 697 -50.971 -38.624 20.293 1.00 1.74 P
ATOM 3 OP1 A A 697 -51.155 -38.123 18.902 1.00 1.74 O
ATOM 4 OP2 A A 697 -49.585 -38.728 20.871 1.00 1.74 O
ATOM 5 O5' A A 697 -51.809 -37.692 21.264 1.00 2.01 O
ATOM 6 C5' A A 697 -53.168 -37.368 20.979 1.00 2.01 C
ATOM 7 C4' A A 697 -53.728 -36.496 22.071 1.00 2.01 C
ATOM 8 O4' A A 697 -54.046 -37.279 23.250 1.00 2.01 O
ATOM 9 C3' A A 697 -52.782 -35.427 22.587 1.00 2.01 C
ATOM 10 O3' A A 697 -52.736 -34.294 21.723 1.00 2.01 O
ATOM 11 C2' A A 697 -53.385 -35.114 23.945 1.00 2.01 C
ATOM 12 O2' A A 697 -54.529 -34.314 23.825 1.00 2.01 O
ATOM 13 C1' A A 697 -53.853 -36.489 24.405 1.00 2.01 C
ATOM 14 N9 A A 697 -52.824 -37.107 25.226 1.00 8.53 N
ATOM 15 C8 A A 697 -51.808 -37.910 24.808 1.00 8.53 C
ATOM 16 N7 A A 697 -51.012 -38.298 25.772 1.00 8.53 N
ATOM 17 C5 A A 697 -51.553 -37.717 26.905 1.00 8.53 C
ATOM 18 C6 A A 697 -51.185 -37.769 28.255 1.00 8.53 C
ATOM 19 N6 A A 697 -50.144 -38.451 28.709 1.00 8.53 N
ATOM 20 N1 A A 697 -51.935 -37.093 29.136 1.00 8.53 N
ATOM 21 C2 A A 697 -52.982 -36.410 28.678 1.00 8.53 C
ATOM 22 N3 A A 697 -53.432 -36.285 27.431 1.00 8.53 N
ATOM 23 C4 A A 697 -52.666 -36.978 26.583 1.00 8.53 C
ATOM 24 P G A 698 -51.362 -33.463 21.553 1.00 27.53 P
ATOM 25 OP1 G A 698 -51.566 -32.565 20.397 1.00 29.91 O
ATOM 26 OP2 G A 698 -50.238 -34.413 21.544 1.00 29.91 O
ATOM 27 O5' G A 698 -51.249 -32.585 22.876 1.00 0.79 O
TER

ATOM 1 O3' G B 786 -55.961 -33.105 33.558 1.00 0.79 O
ATOM 2 P U B 787 -55.964 -31.720 32.744 1.00 0.79 P
ATOM 3 OP1 U B 787 -54.728 -30.979 33.097 1.00 0.79 O
ATOM 4 OP2 U B 787 -57.283 -31.107 32.988 1.00 0.79 O
ATOM 5 O5' U B 787 -55.898 -32.163 31.223 1.00 0.79 O
ATOM 6 C5' U B 787 -54.648 -32.481 30.642 1.00 0.79 C
ATOM 7 C4' U B 787 -54.828 -33.091 29.280 1.00 0.79 C
ATOM 8 O4' U B 787 -55.650 -34.275 29.390 1.00 0.79 O
ATOM 9 C3' U B 787 -55.523 -32.270 28.214 1.00 0.79 C
ATOM 10 O3' U B 787 -54.656 -31.328 27.587 1.00 0.79 O
ATOM 11 C2' U B 787 -55.965 -33.347 27.234 1.00 0.79 C
ATOM 12 O2' U B 787 -54.902 -33.814 26.430 1.00 0.79 O
ATOM 13 C1' U B 787 -56.340 -34.482 28.172 1.00 0.79 C
ATOM 14 N1 U B 787 -57.778 -34.462 28.435 1.00 0.79 N
ATOM 15 C2 U B 787 -58.632 -34.915 27.439 1.00 0.79 C
ATOM 16 O2 U B 787 -58.242 -35.334 26.364 1.00 0.79 O
ATOM 17 N3 U B 787 -59.960 -34.852 27.757 1.00 0.79 N
ATOM 18 C4 U B 787 -60.502 -34.394 28.939 1.00 0.79 C
ATOM 19 O4 U B 787 -61.718 -34.408 29.098 1.00 0.79 O
ATOM 20 C5 U B 787 -59.553 -33.953 29.898 1.00 0.79 C
ATOM 21 C6 U B 787 -58.257 -34.002 29.622 1.00 0.79 C
ATOM 22 P G B 788 -55.288 -30.016 26.896 1.00 0.95 P
ATOM 23 OP1 G B 788 -54.140 -29.252 26.342 1.00 0.95 O
ATOM 24 OP2 G B 788 -56.220 -29.385 27.845 1.00 0.95 O
ATOM 25 O5' G B 788 -56.223 -30.567 25.734 1.00 0.79 O
TER

Atoms:
OP1: (-51.155,-38.123,18.902)
OP2: (-49.585,-38.728,20.871)
C3': (-52.782,-35.427,22.587)
C1': (-53.853,-36.489,24.405)
C5': (-53.168,-37.368,20.979)
O4': (-54.046,-37.279,23.250)
C8: (-51.808,-37.910,24.808)
O2': (-54.529,-34.314,23.825)
C6: (-51.185,-37.769,28.255)
C5: (-51.553,-37.717,26.905)
C4: (-52.666,-36.978,26.583)
P: (-50.971,-38.624,20.293)
C4': (-53.728,-36.496,22.071)
C2': (-53.385,-35.114,23.945)
C2: (-52.982,-36.410,28.678)
N1: (-51.935,-37.093,29.136)
N3: (-53.432,-36.285,27.431)
N6: (-50.144,-38.451,28.709)
N7: (-51.012,-38.298,25.772)
N9: (-52.824,-37.107,25.226)
O5': (-51.809,-37.692,21.264)
O3': (-52.736,-34.294,21.723)
C4: (-60.502,-34.394,28.939)
N3: (-59.960,-34.852,27.757)
OP1: (-54.728,-30.979,33.097)
OP2: (-57.283,-31.107,32.988)
C2: (-58.632,-34.915,27.439)
C1': (-56.340,-34.482,28.172)
C3': (-55.523,-32.270,28.214)
O5': (-55.898,-32.163,31.223)
O4': (-55.650,-34.275,29.390)
C5': (-54.648,-32.481,30.642)
P: (-55.964,-31.720,32.744)
C4': (-54.828,-33.091,29.280)
C2': (-55.965,-33.347,27.234)
O2': (-54.902,-33.814,26.430)
N1: (-57.778,-34.462,28.435)
O4: (-61.718,-34.408,29.098)
O2: (-58.242,-35.334,26.364)
C6: (-58.257,-34.002,29.622)
C5: (-59.553,-33.953,29.898)
O3': (-54.656,-31.328,27.587)
Image (generated by PyMOL):
PyMOL image
show in jmol