ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J01:A437:A388

Extra

PDB:
ATOM 1 O3' U A 436 -17.790 205.354 149.802 1.00 2.22 O
ATOM 2 P A A 437 -16.280 205.073 149.350 1.00 18.49 P
ATOM 3 OP1 A A 437 -15.401 205.243 150.531 1.00 46.08 O
ATOM 4 OP2 A A 437 -16.012 205.860 148.105 1.00 45.92 O
ATOM 5 O5' A A 437 -16.347 203.526 148.974 1.00 26.15 O
ATOM 6 C5' A A 437 -16.945 202.569 149.887 1.00 26.15 C
ATOM 7 C4' A A 437 -17.205 201.254 149.187 1.00 26.15 C
ATOM 8 O4' A A 437 -18.379 201.354 148.346 1.00 26.15 O
ATOM 9 C3' A A 437 -16.088 200.791 148.273 1.00 26.15 C
ATOM 10 O3' A A 437 -15.112 200.075 149.008 1.00 26.15 O
ATOM 11 C2' A A 437 -16.815 199.914 147.269 1.00 26.15 C
ATOM 12 O2' A A 437 -16.995 198.605 147.769 1.00 26.15 O
ATOM 13 C1' A A 437 -18.172 200.620 147.156 1.00 26.15 C
ATOM 14 N9 A A 437 -18.246 201.566 146.049 1.00 31.24 N
ATOM 15 C8 A A 437 -18.354 202.921 146.156 1.00 31.17 C
ATOM 16 N7 A A 437 -18.418 203.536 145.008 1.00 31.12 N
ATOM 17 C5 A A 437 -18.348 202.515 144.081 1.00 31.16 C
ATOM 18 C6 A A 437 -18.380 202.515 142.690 1.00 31.24 C
ATOM 19 N6 A A 437 -18.515 203.622 141.954 1.00 31.26 N
ATOM 20 N1 A A 437 -18.272 201.328 142.062 1.00 31.22 N
ATOM 21 C2 A A 437 -18.154 200.226 142.801 1.00 31.19 C
ATOM 22 N3 A A 437 -18.124 200.100 144.117 1.00 31.15 N
ATOM 23 C4 A A 437 -18.229 201.297 144.706 1.00 31.17 C
ATOM 24 P A A 438 -13.560 200.408 148.793 1.00 32.67 P
ATOM 25 OP1 A A 438 -12.827 199.796 149.930 1.00 68.64 O
ATOM 26 OP2 A A 438 -13.395 201.863 148.505 1.00 68.58 O
ATOM 27 O5' A A 438 -13.176 199.623 147.466 1.00 10.27 O
TER

ATOM 1 O3' G B 387 -13.682 193.496 136.682 1.00 11.53 O
ATOM 2 P U B 388 -14.715 192.455 137.350 1.00 6.99 P
ATOM 3 OP1 U B 388 -13.897 191.370 137.954 1.00 27.81 O
ATOM 4 OP2 U B 388 -15.819 192.117 136.410 1.00 27.81 O
ATOM 5 O5' U B 388 -15.370 193.321 138.512 1.00 16.93 O
ATOM 6 C5' U B 388 -14.589 193.702 139.671 1.00 16.93 C
ATOM 7 C4' U B 388 -15.035 195.042 140.198 1.00 16.93 C
ATOM 8 O4' U B 388 -14.464 196.115 139.408 1.00 16.93 O
ATOM 9 C3' U B 388 -16.534 195.290 140.181 1.00 16.93 C
ATOM 10 O3' U B 388 -17.182 194.690 141.305 1.00 16.93 O
ATOM 11 C2' U B 388 -16.606 196.812 140.184 1.00 16.93 C
ATOM 12 O2' U B 388 -16.464 197.357 141.473 1.00 16.93 O
ATOM 13 C1' U B 388 -15.375 197.192 139.355 1.00 16.93 C
ATOM 14 N1 U B 388 -15.704 197.450 137.948 1.00 36.60 N
ATOM 15 C2 U B 388 -16.586 198.479 137.678 1.00 36.72 C
ATOM 16 O2 U B 388 -17.075 199.178 138.552 1.00 36.77 O
ATOM 17 N3 U B 388 -16.876 198.661 136.354 1.00 36.79 N
ATOM 18 C4 U B 388 -16.385 197.947 135.303 1.00 36.72 C
ATOM 19 O4 U B 388 -16.753 198.227 134.167 1.00 36.73 O
ATOM 20 C5 U B 388 -15.469 196.909 135.659 1.00 36.71 C
ATOM 21 C6 U B 388 -15.169 196.702 136.937 1.00 36.61 C
ATOM 22 P A B 389 -18.591 193.928 141.108 1.00 12.78 P
ATOM 23 OP1 A B 389 -18.820 193.069 142.293 1.00 43.23 O
ATOM 24 OP2 A B 389 -18.619 193.331 139.740 1.00 43.45 O
ATOM 25 O5' A B 389 -19.670 195.092 141.160 1.00 12.44 O
TER

Atoms:
OP1: (-15.401,205.243,150.531)
OP2: (-16.012,205.860,148.105)
C3': (-16.088,200.791,148.273)
C1': (-18.172,200.620,147.156)
C5': (-16.945,202.569,149.887)
O4': (-18.379,201.354,148.346)
C8: (-18.354,202.921,146.156)
O2': (-16.995,198.605,147.769)
C6: (-18.380,202.515,142.690)
C5: (-18.348,202.515,144.081)
C4: (-18.229,201.297,144.706)
P: (-16.280,205.073,149.350)
C4': (-17.205,201.254,149.187)
C2': (-16.815,199.914,147.269)
C2: (-18.154,200.226,142.801)
N1: (-18.272,201.328,142.062)
N3: (-18.124,200.100,144.117)
N6: (-18.515,203.622,141.954)
N7: (-18.418,203.536,145.008)
N9: (-18.246,201.566,146.049)
O5': (-16.347,203.526,148.974)
O3': (-15.112,200.075,149.008)
C4: (-16.385,197.947,135.303)
N3: (-16.876,198.661,136.354)
OP1: (-13.897,191.370,137.954)
OP2: (-15.819,192.117,136.410)
C2: (-16.586,198.479,137.678)
C1': (-15.375,197.192,139.355)
C3': (-16.534,195.290,140.181)
O5': (-15.370,193.321,138.512)
O4': (-14.464,196.115,139.408)
C5': (-14.589,193.702,139.671)
P: (-14.715,192.455,137.350)
C4': (-15.035,195.042,140.198)
C2': (-16.606,196.812,140.184)
O2': (-16.464,197.357,141.473)
N1: (-15.704,197.450,137.948)
O4: (-16.753,198.227,134.167)
O2: (-17.075,199.178,138.552)
C6: (-15.169,196.702,136.937)
C5: (-15.469,196.909,135.659)
O3': (-17.182,194.690,141.305)
Image (generated by PyMOL):
PyMOL image
show in jmol