ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A1327:A702

Extra

PDB:
ATOM 1 O3' G A1326 -31.027 -38.779 37.350 1.00 1.36 O
ATOM 2 P A A1327 -29.601 -39.185 36.730 1.00 19.48 P
ATOM 3 OP1 A A1327 -29.679 -40.641 36.414 1.00 22.96 O
ATOM 4 OP2 A A1327 -28.516 -38.686 37.608 1.00 22.96 O
ATOM 5 O5' A A1327 -29.528 -38.364 35.374 1.00 14.50 O
ATOM 6 C5' A A1327 -30.155 -38.864 34.197 1.00 14.50 C
ATOM 7 C4' A A1327 -29.706 -38.076 33.000 1.00 14.50 C
ATOM 8 O4' A A1327 -30.071 -36.708 33.244 1.00 14.50 O
ATOM 9 C3' A A1327 -28.199 -38.017 32.722 1.00 14.50 C
ATOM 10 O3' A A1327 -27.657 -39.145 31.961 1.00 14.50 O
ATOM 11 C2' A A1327 -27.978 -36.653 32.070 1.00 14.50 C
ATOM 12 O2' A A1327 -27.867 -36.680 30.668 1.00 14.50 O
ATOM 13 C1' A A1327 -29.247 -35.888 32.457 1.00 14.50 C
ATOM 14 N9 A A1327 -29.070 -34.583 33.089 1.00 29.49 N
ATOM 15 C8 A A1327 -28.289 -34.191 34.144 1.00 29.49 C
ATOM 16 N7 A A1327 -28.313 -32.898 34.361 1.00 29.49 N
ATOM 17 C5 A A1327 -29.191 -32.416 33.400 1.00 29.49 C
ATOM 18 C6 A A1327 -29.644 -31.130 33.090 1.00 29.49 C
ATOM 19 N6 A A1327 -29.238 -30.029 33.717 1.00 29.49 N
ATOM 20 N1 A A1327 -30.539 -31.003 32.089 1.00 29.49 N
ATOM 21 C2 A A1327 -30.933 -32.097 31.440 1.00 29.49 C
ATOM 22 N3 A A1327 -30.569 -33.352 31.625 1.00 29.49 N
ATOM 23 C4 A A1327 -29.684 -33.445 32.633 1.00 29.49 C
ATOM 24 P A A1328 -28.317 -39.610 30.545 1.00 28.49 P
ATOM 25 OP1 A A1328 -29.331 -38.632 30.091 1.00 43.49 O
ATOM 26 OP2 A A1328 -28.719 -41.026 30.737 1.00 43.49 O
ATOM 27 O5' A A1328 -27.109 -39.608 29.493 1.00 13.73 O
TER

ATOM 1 O3' C B 701 -35.209 -26.386 30.799 1.00 0.79 O
ATOM 2 P U B 702 -34.377 -25.986 29.489 1.00 11.23 P
ATOM 3 OP1 U B 702 -33.345 -24.975 29.830 1.00 11.43 O
ATOM 4 OP2 U B 702 -35.353 -25.691 28.417 1.00 11.43 O
ATOM 5 O5' U B 702 -33.633 -27.338 29.128 1.00 0.79 O
ATOM 6 C5' U B 702 -32.537 -27.790 29.926 1.00 0.79 C
ATOM 7 C4' U B 702 -31.938 -29.013 29.314 1.00 0.79 C
ATOM 8 O4' U B 702 -32.987 -29.988 29.195 1.00 0.79 O
ATOM 9 C3' U B 702 -31.441 -28.831 27.898 1.00 0.79 C
ATOM 10 O3' U B 702 -30.111 -28.379 27.889 1.00 0.79 O
ATOM 11 C2' U B 702 -31.547 -30.226 27.326 1.00 0.79 C
ATOM 12 O2' U B 702 -30.472 -31.020 27.762 1.00 0.79 O
ATOM 13 C1' U B 702 -32.797 -30.743 28.019 1.00 0.79 C
ATOM 14 N1 U B 702 -34.009 -30.664 27.198 1.00 21.43 N
ATOM 15 C2 U B 702 -34.211 -31.659 26.269 1.00 21.43 C
ATOM 16 O2 U B 702 -33.405 -32.555 26.063 1.00 21.43 O
ATOM 17 N3 U B 702 -35.382 -31.563 25.574 1.00 21.43 N
ATOM 18 C4 U B 702 -36.338 -30.582 25.689 1.00 21.43 C
ATOM 19 O4 U B 702 -37.322 -30.593 24.936 1.00 21.43 O
ATOM 20 C5 U B 702 -36.038 -29.581 26.658 1.00 21.43 C
ATOM 21 C6 U B 702 -34.910 -29.655 27.360 1.00 21.43 C
ATOM 22 P G B 703 -29.442 -27.944 26.500 1.00 9.60 P
ATOM 23 OP1 G B 703 -28.061 -27.493 26.759 1.00 13.41 O
ATOM 24 OP2 G B 703 -30.383 -27.064 25.779 1.00 13.41 O
ATOM 25 O5' G B 703 -29.327 -29.305 25.705 1.00 8.08 O
TER

Atoms:
OP1: (-29.679,-40.641,36.414)
OP2: (-28.516,-38.686,37.608)
C3': (-28.199,-38.017,32.722)
C1': (-29.247,-35.888,32.457)
C5': (-30.155,-38.864,34.197)
O4': (-30.071,-36.708,33.244)
C8: (-28.289,-34.191,34.144)
O2': (-27.867,-36.680,30.668)
C6: (-29.644,-31.130,33.090)
C5: (-29.191,-32.416,33.400)
C4: (-29.684,-33.445,32.633)
P: (-29.601,-39.185,36.730)
C4': (-29.706,-38.076,33.000)
C2': (-27.978,-36.653,32.070)
C2: (-30.933,-32.097,31.440)
N1: (-30.539,-31.003,32.089)
N3: (-30.569,-33.352,31.625)
N6: (-29.238,-30.029,33.717)
N7: (-28.313,-32.898,34.361)
N9: (-29.070,-34.583,33.089)
O5': (-29.528,-38.364,35.374)
O3': (-27.657,-39.145,31.961)
C4: (-36.338,-30.582,25.689)
N3: (-35.382,-31.563,25.574)
OP1: (-33.345,-24.975,29.830)
OP2: (-35.353,-25.691,28.417)
C2: (-34.211,-31.659,26.269)
C1': (-32.797,-30.743,28.019)
C3': (-31.441,-28.831,27.898)
O5': (-33.633,-27.338,29.128)
O4': (-32.987,-29.988,29.195)
C5': (-32.537,-27.790,29.926)
P: (-34.377,-25.986,29.489)
C4': (-31.938,-29.013,29.314)
C2': (-31.547,-30.226,27.326)
O2': (-30.472,-31.020,27.762)
N1: (-34.009,-30.664,27.198)
O4: (-37.322,-30.593,24.936)
O2: (-33.405,-32.555,26.063)
C6: (-34.910,-29.655,27.360)
C5: (-36.038,-29.581,26.658)
O3': (-30.111,-28.379,27.889)
Image (generated by PyMOL):
PyMOL image
show in jmol