ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:0670:0198

Extra

PDB:
ATOM 1 O3' G A 669 45.376 88.578 27.673 1.00 40.85 O
ATOM 2 P A A 670 46.751 88.299 26.878 1.00 44.03 P
ATOM 3 OP1 A A 670 46.472 88.109 25.428 1.00 42.50 O
ATOM 4 OP2 A A 670 47.506 87.261 27.615 1.00 40.04 O
ATOM 5 O5' A A 670 47.533 89.672 27.054 1.00 43.89 O
ATOM 6 C5' A A 670 48.651 89.994 26.229 1.00 43.12 C
ATOM 7 C4' A A 670 49.560 90.955 26.951 1.00 42.93 C
ATOM 8 O4' A A 670 48.803 92.127 27.351 1.00 41.85 O
ATOM 9 C3' A A 670 50.143 90.472 28.270 1.00 41.22 C
ATOM 10 O3' A A 670 51.272 89.628 28.058 1.00 39.90 O
ATOM 11 C2' A A 670 50.567 91.787 28.909 1.00 40.41 C
ATOM 12 O2' A A 670 51.754 92.283 28.332 1.00 40.87 O
ATOM 13 C1' A A 670 49.434 92.716 28.474 1.00 41.96 C
ATOM 14 N9 A A 670 48.439 92.985 29.511 1.00 43.39 N
ATOM 15 C8 A A 670 47.117 92.614 29.568 1.00 44.17 C
ATOM 16 N7 A A 670 46.489 93.055 30.629 1.00 44.60 N
ATOM 17 C5 A A 670 47.466 93.757 31.323 1.00 46.37 C
ATOM 18 C6 A A 670 47.441 94.472 32.533 1.00 46.10 C
ATOM 19 N6 A A 670 46.354 94.603 33.295 1.00 46.21 N
ATOM 20 N1 A A 670 48.588 95.056 32.940 1.00 46.60 N
ATOM 21 C2 A A 670 49.684 94.921 32.182 1.00 45.95 C
ATOM 22 N3 A A 670 49.834 94.280 31.031 1.00 46.13 N
ATOM 23 C4 A A 670 48.673 93.714 30.650 1.00 45.59 C
ATOM 24 P G A 671 51.385 88.233 28.846 1.00 40.33 P
ATOM 25 OP1 G A 671 52.737 87.658 28.600 1.00 37.85 O
ATOM 26 OP2 G A 671 50.182 87.432 28.513 1.00 43.26 O
ATOM 27 O5' G A 671 51.269 88.641 30.384 1.00 40.46 O
TER

ATOM 1 O3' G B 197 50.369 99.562 35.545 1.00 35.45 O
ATOM 2 P U B 198 51.239 98.926 36.741 1.00 36.27 P
ATOM 3 OP1 U B 198 50.326 98.707 37.873 1.00 34.79 O
ATOM 4 OP2 U B 198 52.440 99.781 36.922 1.00 39.27 O
ATOM 5 O5' U B 198 51.796 97.532 36.192 1.00 34.63 O
ATOM 6 C5' U B 198 50.918 96.429 35.922 1.00 35.95 C
ATOM 7 C4' U B 198 51.591 95.415 35.014 1.00 36.82 C
ATOM 8 O4' U B 198 52.250 96.115 33.924 1.00 35.90 O
ATOM 9 C3' U B 198 52.723 94.561 35.575 1.00 36.51 C
ATOM 10 O3' U B 198 52.241 93.447 36.334 1.00 34.90 O
ATOM 11 C2' U B 198 53.368 94.050 34.294 1.00 37.14 C
ATOM 12 O2' U B 198 52.626 92.990 33.726 1.00 39.12 O
ATOM 13 C1' U B 198 53.247 95.272 33.376 1.00 37.23 C
ATOM 14 N1 U B 198 54.509 96.017 33.237 1.00 38.45 N
ATOM 15 C2 U B 198 55.493 95.455 32.438 1.00 39.08 C
ATOM 16 O2 U B 198 55.329 94.432 31.803 1.00 36.92 O
ATOM 17 N3 U B 198 56.676 96.149 32.405 1.00 40.39 N
ATOM 18 C4 U B 198 56.966 97.330 33.047 1.00 38.74 C
ATOM 19 O4 U B 198 58.110 97.777 32.989 1.00 41.93 O
ATOM 20 C5 U B 198 55.890 97.875 33.810 1.00 35.98 C
ATOM 21 C6 U B 198 54.729 97.217 33.884 1.00 39.11 C
ATOM 22 P U B 199 53.169 92.777 37.471 1.00 34.60 P
ATOM 23 OP1 U B 199 52.336 91.751 38.138 1.00 36.04 O
ATOM 24 OP2 U B 199 53.783 93.855 38.289 1.00 37.89 O
ATOM 25 O5' U B 199 54.351 92.066 36.677 1.00 31.75 O
TER

Atoms:
OP1: (46.472,88.109,25.428)
OP2: (47.506,87.261,27.615)
C3': (50.143,90.472,28.270)
C1': (49.434,92.716,28.474)
C5': (48.651,89.994,26.229)
O4': (48.803,92.127,27.351)
C8: (47.117,92.614,29.568)
O2': (51.754,92.283,28.332)
C6: (47.441,94.472,32.533)
C5: (47.466,93.757,31.323)
C4: (48.673,93.714,30.650)
P: (46.751,88.299,26.878)
C4': (49.560,90.955,26.951)
C2': (50.567,91.787,28.909)
C2: (49.684,94.921,32.182)
N1: (48.588,95.056,32.940)
N3: (49.834,94.280,31.031)
N6: (46.354,94.603,33.295)
N7: (46.489,93.055,30.629)
N9: (48.439,92.985,29.511)
O5': (47.533,89.672,27.054)
O3': (51.272,89.628,28.058)
C4: (56.966,97.330,33.047)
N3: (56.676,96.149,32.405)
OP1: (50.326,98.707,37.873)
OP2: (52.440,99.781,36.922)
C2: (55.493,95.455,32.438)
C1': (53.247,95.272,33.376)
C3': (52.723,94.561,35.575)
O5': (51.796,97.532,36.192)
O4': (52.250,96.115,33.924)
C5': (50.918,96.429,35.922)
P: (51.239,98.926,36.741)
C4': (51.591,95.415,35.014)
C2': (53.368,94.050,34.294)
O2': (52.626,92.990,33.726)
N1: (54.509,96.017,33.237)
O4: (58.110,97.777,32.989)
O2: (55.329,94.432,31.803)
C6: (54.729,97.217,33.884)
C5: (55.890,97.875,33.810)
O3': (52.241,93.447,36.334)
Image (generated by PyMOL):
PyMOL image
show in jmol