ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A359:A100

Extra

PDB:
ATOM 1 O3' A A 358 30.463 -78.170 -85.677 1.00 71.39 O
ATOM 2 P A A 359 31.332 -76.810 -85.652 1.00 77.68 P
ATOM 3 OP1 A A 359 30.512 -75.810 -86.383 1.00 82.42 O
ATOM 4 OP2 A A 359 32.736 -77.059 -86.082 1.00 77.91 O
ATOM 5 O5' A A 359 31.360 -76.389 -84.123 1.00 64.37 O
ATOM 6 C5' A A 359 30.232 -75.798 -83.516 1.00 59.26 C
ATOM 7 C4' A A 359 30.560 -75.429 -82.097 1.00 59.69 C
ATOM 8 O4' A A 359 30.782 -76.648 -81.354 1.00 64.05 O
ATOM 9 C3' A A 359 31.821 -74.601 -81.893 1.00 61.38 C
ATOM 10 O3' A A 359 31.545 -73.197 -81.997 1.00 67.56 O
ATOM 11 C2' A A 359 32.241 -74.984 -80.478 1.00 63.12 C
ATOM 12 O2' A A 359 31.525 -74.262 -79.501 1.00 66.26 O
ATOM 13 C1' A A 359 31.793 -76.442 -80.392 1.00 64.32 C
ATOM 14 N9 A A 359 32.864 -77.409 -80.626 1.00 67.80 N
ATOM 15 C8 A A 359 33.083 -78.205 -81.724 1.00 69.12 C
ATOM 16 N7 A A 359 34.129 -78.985 -81.610 1.00 74.93 N
ATOM 17 C5 A A 359 34.637 -78.677 -80.356 1.00 76.01 C
ATOM 18 C6 A A 359 35.752 -79.160 -79.638 1.00 74.57 C
ATOM 19 N6 A A 359 36.590 -80.085 -80.096 1.00 69.73 N
ATOM 20 N1 A A 359 35.976 -78.645 -78.413 1.00 74.91 N
ATOM 21 C2 A A 359 35.138 -77.704 -77.949 1.00 76.07 C
ATOM 22 N3 A A 359 34.064 -77.168 -78.528 1.00 71.32 N
ATOM 23 C4 A A 359 33.867 -77.706 -79.742 1.00 72.51 C
ATOM 24 P G A 360 32.675 -72.179 -82.542 1.00 67.97 P
ATOM 25 OP1 G A 360 32.075 -70.844 -82.807 1.00 61.92 O
ATOM 26 OP2 G A 360 33.407 -72.890 -83.630 1.00 68.28 O
ATOM 27 O5' G A 360 33.651 -72.005 -81.300 1.00 70.65 O
TER

ATOM 1 O3' C B 99 37.087 -78.435 -71.506 1.00 53.75 O
ATOM 2 P U B 100 36.625 -76.981 -71.029 1.00 51.20 P
ATOM 3 OP1 U B 100 37.842 -76.187 -70.806 1.00 43.76 O
ATOM 4 OP2 U B 100 35.659 -77.165 -69.922 1.00 48.54 O
ATOM 5 O5' U B 100 35.850 -76.386 -72.282 1.00 60.13 O
ATOM 6 C5' U B 100 36.432 -76.417 -73.577 1.00 61.82 C
ATOM 7 C4' U B 100 35.372 -76.206 -74.620 1.00 60.30 C
ATOM 8 O4' U B 100 34.512 -77.370 -74.689 1.00 64.52 O
ATOM 9 C3' U B 100 34.411 -75.069 -74.347 1.00 58.28 C
ATOM 10 O3' U B 100 34.918 -73.794 -74.700 1.00 62.82 O
ATOM 11 C2' U B 100 33.204 -75.446 -75.185 1.00 64.02 C
ATOM 12 O2' U B 100 33.278 -75.048 -76.530 1.00 67.48 O
ATOM 13 C1' U B 100 33.215 -76.974 -75.093 1.00 65.16 C
ATOM 14 N1 U B 100 32.225 -77.399 -74.095 1.00 63.94 N
ATOM 15 C2 U B 100 30.919 -76.967 -74.280 1.00 61.07 C
ATOM 16 O2 U B 100 30.563 -76.334 -75.257 1.00 63.72 O
ATOM 17 N3 U B 100 30.049 -77.295 -73.284 1.00 58.18 N
ATOM 18 C4 U B 100 30.335 -77.997 -72.149 1.00 63.30 C
ATOM 19 O4 U B 100 29.474 -78.106 -71.281 1.00 66.67 O
ATOM 20 C5 U B 100 31.689 -78.449 -72.052 1.00 66.48 C
ATOM 21 C6 U B 100 32.564 -78.147 -73.009 1.00 62.17 C
ATOM 22 P G B 101 34.400 -72.504 -73.904 1.00 67.25 P
ATOM 23 OP1 G B 101 35.220 -71.313 -74.271 1.00 64.35 O
ATOM 24 OP2 G B 101 34.277 -72.904 -72.484 1.00 64.32 O
ATOM 25 O5' G B 101 32.920 -72.311 -74.445 1.00 58.43 O
TER

Atoms:
OP1: (30.512,-75.810,-86.383)
OP2: (32.736,-77.059,-86.082)
C3': (31.821,-74.601,-81.893)
C1': (31.793,-76.442,-80.392)
C5': (30.232,-75.798,-83.516)
O4': (30.782,-76.648,-81.354)
C8: (33.083,-78.205,-81.724)
O2': (31.525,-74.262,-79.501)
C6: (35.752,-79.160,-79.638)
C5: (34.637,-78.677,-80.356)
C4: (33.867,-77.706,-79.742)
P: (31.332,-76.810,-85.652)
C4': (30.560,-75.429,-82.097)
C2': (32.241,-74.984,-80.478)
C2: (35.138,-77.704,-77.949)
N1: (35.976,-78.645,-78.413)
N3: (34.064,-77.168,-78.528)
N6: (36.590,-80.085,-80.096)
N7: (34.129,-78.985,-81.610)
N9: (32.864,-77.409,-80.626)
O5': (31.360,-76.389,-84.123)
O3': (31.545,-73.197,-81.997)
C4: (30.335,-77.997,-72.149)
N3: (30.049,-77.295,-73.284)
OP1: (37.842,-76.187,-70.806)
OP2: (35.659,-77.165,-69.922)
C2: (30.919,-76.967,-74.280)
C1': (33.215,-76.974,-75.093)
C3': (34.411,-75.069,-74.347)
O5': (35.850,-76.386,-72.282)
O4': (34.512,-77.370,-74.689)
C5': (36.432,-76.417,-73.577)
P: (36.625,-76.981,-71.029)
C4': (35.372,-76.206,-74.620)
C2': (33.204,-75.446,-75.185)
O2': (33.278,-75.048,-76.530)
N1: (32.225,-77.399,-74.095)
O4: (29.474,-78.106,-71.281)
O2: (30.563,-76.334,-75.257)
C6: (32.564,-78.147,-73.009)
C5: (31.689,-78.449,-72.052)
O3': (34.918,-73.794,-74.700)
Image (generated by PyMOL):
PyMOL image
show in jmol