ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:0899:01001

Extra

PDB:
ATOM 1 O3' G A 898 35.324 89.476 83.433 1.00 30.54 O
ATOM 2 P A A 899 35.574 89.830 84.990 1.00 31.44 P
ATOM 3 OP1 A A 899 36.095 88.608 85.621 1.00 29.78 O
ATOM 4 OP2 A A 899 34.364 90.495 85.544 1.00 27.48 O
ATOM 5 O5' A A 899 36.745 90.922 84.953 1.00 31.48 O
ATOM 6 C5' A A 899 38.113 90.549 85.197 1.00 29.55 C
ATOM 7 C4' A A 899 38.768 90.069 83.922 1.00 30.39 C
ATOM 8 O4' A A 899 38.625 91.061 82.868 1.00 29.75 O
ATOM 9 C3' A A 899 40.260 89.831 84.067 1.00 30.30 C
ATOM 10 O3' A A 899 40.521 88.507 84.493 1.00 34.90 O
ATOM 11 C2' A A 899 40.801 90.154 82.681 1.00 30.31 C
ATOM 12 O2' A A 899 40.646 89.104 81.749 1.00 32.41 O
ATOM 13 C1' A A 899 39.886 91.311 82.273 1.00 28.90 C
ATOM 14 N9 A A 899 40.337 92.635 82.715 1.00 30.06 N
ATOM 15 C8 A A 899 39.630 93.544 83.469 1.00 28.05 C
ATOM 16 N7 A A 899 40.267 94.666 83.677 1.00 29.08 N
ATOM 17 C5 A A 899 41.483 94.489 83.027 1.00 28.70 C
ATOM 18 C6 A A 899 42.611 95.326 82.880 1.00 27.85 C
ATOM 19 N6 A A 899 42.679 96.558 83.369 1.00 25.80 N
ATOM 20 N1 A A 899 43.672 94.843 82.198 1.00 27.43 N
ATOM 21 C2 A A 899 43.588 93.613 81.678 1.00 29.97 C
ATOM 22 N3 A A 899 42.575 92.735 81.736 1.00 29.78 N
ATOM 23 C4 A A 899 41.545 93.240 82.440 1.00 29.10 C
ATOM 24 P A A 900 41.543 88.246 85.703 1.00 35.40 P
ATOM 25 OP1 A A 900 41.618 86.777 85.883 1.00 37.59 O
ATOM 26 OP2 A A 900 41.155 89.112 86.842 1.00 33.02 O
ATOM 27 O5' A A 900 42.949 88.725 85.126 1.00 35.04 O
TER

ATOM 1 O3' U B1000 45.673 97.788 77.819 1.00 28.10 O
ATOM 2 P U B1001 47.162 97.951 78.408 1.00 27.96 P
ATOM 3 OP1 U B1001 47.135 99.164 79.245 1.00 29.68 O
ATOM 4 OP2 U B1001 48.123 97.854 77.298 1.00 29.36 O
ATOM 5 O5' U B1001 47.400 96.698 79.363 1.00 28.11 O
ATOM 6 C5' U B1001 46.605 96.480 80.544 1.00 26.51 C
ATOM 7 C4' U B1001 46.950 95.135 81.153 1.00 29.86 C
ATOM 8 O4' U B1001 46.617 94.063 80.228 1.00 30.61 O
ATOM 9 C3' U B1001 48.431 94.939 81.417 1.00 29.46 C
ATOM 10 O3' U B1001 48.809 95.538 82.643 1.00 31.19 O
ATOM 11 C2' U B1001 48.583 93.426 81.422 1.00 30.47 C
ATOM 12 O2' U B1001 48.234 92.830 82.648 1.00 31.69 O
ATOM 13 C1' U B1001 47.583 93.019 80.338 1.00 29.87 C
ATOM 14 N1 U B1001 48.235 92.834 79.033 1.00 30.83 N
ATOM 15 C2 U B1001 48.935 91.655 78.815 1.00 31.97 C
ATOM 16 O2 U B1001 49.038 90.770 79.649 1.00 32.83 O
ATOM 17 N3 U B1001 49.515 91.552 77.577 1.00 30.50 N
ATOM 18 C4 U B1001 49.476 92.482 76.563 1.00 30.28 C
ATOM 19 O4 U B1001 50.046 92.240 75.506 1.00 29.35 O
ATOM 20 C5 U B1001 48.746 93.672 76.866 1.00 29.87 C
ATOM 21 C6 U B1001 48.164 93.804 78.056 1.00 29.94 C
ATOM 22 P C B1002 50.279 96.149 82.800 1.00 29.58 P
ATOM 23 OP1 C B1002 50.344 96.823 84.107 1.00 30.25 O
ATOM 24 OP2 C B1002 50.585 96.911 81.555 1.00 30.74 O
ATOM 25 O5' C B1002 51.216 94.868 82.862 1.00 26.79 O
TER

Atoms:
OP1: (36.095,88.608,85.621)
OP2: (34.364,90.495,85.544)
C3': (40.260,89.831,84.067)
C1': (39.886,91.311,82.273)
C5': (38.113,90.549,85.197)
O4': (38.625,91.061,82.868)
C8: (39.630,93.544,83.469)
O2': (40.646,89.104,81.749)
C6: (42.611,95.326,82.880)
C5: (41.483,94.489,83.027)
C4: (41.545,93.240,82.440)
P: (35.574,89.830,84.990)
C4': (38.768,90.069,83.922)
C2': (40.801,90.154,82.681)
C2: (43.588,93.613,81.678)
N1: (43.672,94.843,82.198)
N3: (42.575,92.735,81.736)
N6: (42.679,96.558,83.369)
N7: (40.267,94.666,83.677)
N9: (40.337,92.635,82.715)
O5': (36.745,90.922,84.953)
O3': (40.521,88.507,84.493)
C4: (49.476,92.482,76.563)
N3: (49.515,91.552,77.577)
OP1: (47.135,99.164,79.245)
OP2: (48.123,97.854,77.298)
C2: (48.935,91.655,78.815)
C1': (47.583,93.019,80.338)
C3': (48.431,94.939,81.417)
O5': (47.400,96.698,79.363)
O4': (46.617,94.063,80.228)
C5': (46.605,96.480,80.544)
P: (47.162,97.951,78.408)
C4': (46.950,95.135,81.153)
C2': (48.583,93.426,81.422)
O2': (48.234,92.830,82.648)
N1: (48.235,92.834,79.033)
O4: (50.046,92.240,75.506)
O2: (49.038,90.770,79.649)
C6: (48.164,93.804,78.056)
C5: (48.746,93.672,76.866)
O3': (48.809,95.538,82.643)
Image (generated by PyMOL):
PyMOL image
show in jmol