Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:B63:B64
Extra
PDB:
ATOM 1 O3' C A 62 50.944 26.313 121.660 1.00 71.52 O
ATOM 2 P C A 63 50.964 27.907 121.853 1.00 69.76 P
ATOM 3 OP1 C A 63 49.966 28.241 122.897 1.00 68.82 O
ATOM 4 OP2 C A 63 50.876 28.569 120.532 1.00 70.54 O
ATOM 5 O5' C A 63 52.397 28.173 122.485 1.00 69.04 O
ATOM 6 C5' C A 63 52.642 27.775 123.833 1.00 69.94 C
ATOM 7 C4' C A 63 53.953 28.323 124.326 1.00 71.53 C
ATOM 8 O4' C A 63 55.035 27.785 123.538 1.00 71.22 O
ATOM 9 C3' C A 63 54.148 29.826 124.252 1.00 72.61 C
ATOM 10 O3' C A 63 53.519 30.420 125.384 1.00 76.08 O
ATOM 11 C2' C A 63 55.665 29.940 124.326 1.00 71.43 C
ATOM 12 O2' C A 63 56.138 29.750 125.652 1.00 70.49 O
ATOM 13 C1' C A 63 56.086 28.731 123.488 1.00 70.88 C
ATOM 14 N1 C A 63 56.395 29.015 122.076 1.00 69.92 N
ATOM 15 C2 C A 63 57.644 29.564 121.764 1.00 69.11 C
ATOM 16 O2 C A 63 58.420 29.842 122.690 1.00 68.70 O
ATOM 17 N3 C A 63 57.969 29.777 120.468 1.00 67.93 N
ATOM 18 C4 C A 63 57.096 29.469 119.502 1.00 67.57 C
ATOM 19 N4 C A 63 57.468 29.665 118.237 1.00 65.82 N
ATOM 20 C5 C A 63 55.804 28.937 119.793 1.00 68.24 C
ATOM 21 C6 C A 63 55.497 28.729 121.080 1.00 69.83 C
ATOM 22 P A A 64 52.743 31.821 125.234 1.00 77.71 P
ATOM 23 OP1 A A 64 52.321 32.233 126.601 1.00 78.11 O
ATOM 24 OP2 A A 64 51.723 31.723 124.159 1.00 77.40 O
ATOM 25 O5' A A 64 53.884 32.820 124.762 1.00 77.87 O
TER
ATOM 1 O3' C B 63 53.519 30.420 125.384 1.00 76.08 O
ATOM 2 P A B 64 52.743 31.821 125.234 1.00 77.71 P
ATOM 3 OP1 A B 64 52.321 32.233 126.601 1.00 78.11 O
ATOM 4 OP2 A B 64 51.723 31.723 124.159 1.00 77.40 O
ATOM 5 O5' A B 64 53.884 32.820 124.762 1.00 77.87 O
ATOM 6 C5' A B 64 55.129 32.931 125.478 1.00 80.55 C
ATOM 7 C4' A B 64 55.801 34.222 125.096 1.00 82.37 C
ATOM 8 O4' A B 64 55.960 34.246 123.657 1.00 83.64 O
ATOM 9 C3' A B 64 54.988 35.460 125.438 1.00 82.66 C
ATOM 10 O3' A B 64 55.321 35.811 126.788 1.00 80.88 O
ATOM 11 C2' A B 64 55.328 36.446 124.321 1.00 83.49 C
ATOM 12 O2' A B 64 56.535 37.135 124.530 1.00 86.11 O
ATOM 13 C1' A B 64 55.564 35.504 123.144 1.00 83.97 C
ATOM 14 N9 A B 64 54.463 35.267 122.221 1.00 84.31 N
ATOM 15 C8 A B 64 53.194 34.821 122.481 1.00 85.18 C
ATOM 16 N7 A B 64 52.494 34.568 121.400 1.00 85.02 N
ATOM 17 C5 A B 64 53.352 34.906 120.362 1.00 84.34 C
ATOM 18 C6 A B 64 53.222 34.844 118.965 1.00 84.28 C
ATOM 19 N6 A B 64 52.144 34.368 118.345 1.00 85.06 N
ATOM 20 N1 A B 64 54.259 35.276 118.216 1.00 83.57 N
ATOM 21 C2 A B 64 55.355 35.717 118.838 1.00 83.86 C
ATOM 22 N3 A B 64 55.606 35.801 120.140 1.00 84.47 N
ATOM 23 C4 A B 64 54.551 35.374 120.856 1.00 84.39 C
ATOM 24 P G B 65 55.857 37.285 127.163 1.00 78.90 P
ATOM 25 OP1 G B 65 55.592 37.404 128.613 1.00 80.09 O
ATOM 26 OP2 G B 65 55.335 38.329 126.239 1.00 79.17 O
ATOM 27 O5' G B 65 57.436 37.183 126.997 1.00 76.22 O
TER
ATOM 2 P C A 63 50.964 27.907 121.853 1.00 69.76 P
ATOM 3 OP1 C A 63 49.966 28.241 122.897 1.00 68.82 O
ATOM 4 OP2 C A 63 50.876 28.569 120.532 1.00 70.54 O
ATOM 5 O5' C A 63 52.397 28.173 122.485 1.00 69.04 O
ATOM 6 C5' C A 63 52.642 27.775 123.833 1.00 69.94 C
ATOM 7 C4' C A 63 53.953 28.323 124.326 1.00 71.53 C
ATOM 8 O4' C A 63 55.035 27.785 123.538 1.00 71.22 O
ATOM 9 C3' C A 63 54.148 29.826 124.252 1.00 72.61 C
ATOM 10 O3' C A 63 53.519 30.420 125.384 1.00 76.08 O
ATOM 11 C2' C A 63 55.665 29.940 124.326 1.00 71.43 C
ATOM 12 O2' C A 63 56.138 29.750 125.652 1.00 70.49 O
ATOM 13 C1' C A 63 56.086 28.731 123.488 1.00 70.88 C
ATOM 14 N1 C A 63 56.395 29.015 122.076 1.00 69.92 N
ATOM 15 C2 C A 63 57.644 29.564 121.764 1.00 69.11 C
ATOM 16 O2 C A 63 58.420 29.842 122.690 1.00 68.70 O
ATOM 17 N3 C A 63 57.969 29.777 120.468 1.00 67.93 N
ATOM 18 C4 C A 63 57.096 29.469 119.502 1.00 67.57 C
ATOM 19 N4 C A 63 57.468 29.665 118.237 1.00 65.82 N
ATOM 20 C5 C A 63 55.804 28.937 119.793 1.00 68.24 C
ATOM 21 C6 C A 63 55.497 28.729 121.080 1.00 69.83 C
ATOM 22 P A A 64 52.743 31.821 125.234 1.00 77.71 P
ATOM 23 OP1 A A 64 52.321 32.233 126.601 1.00 78.11 O
ATOM 24 OP2 A A 64 51.723 31.723 124.159 1.00 77.40 O
ATOM 25 O5' A A 64 53.884 32.820 124.762 1.00 77.87 O
TER
ATOM 1 O3' C B 63 53.519 30.420 125.384 1.00 76.08 O
ATOM 2 P A B 64 52.743 31.821 125.234 1.00 77.71 P
ATOM 3 OP1 A B 64 52.321 32.233 126.601 1.00 78.11 O
ATOM 4 OP2 A B 64 51.723 31.723 124.159 1.00 77.40 O
ATOM 5 O5' A B 64 53.884 32.820 124.762 1.00 77.87 O
ATOM 6 C5' A B 64 55.129 32.931 125.478 1.00 80.55 C
ATOM 7 C4' A B 64 55.801 34.222 125.096 1.00 82.37 C
ATOM 8 O4' A B 64 55.960 34.246 123.657 1.00 83.64 O
ATOM 9 C3' A B 64 54.988 35.460 125.438 1.00 82.66 C
ATOM 10 O3' A B 64 55.321 35.811 126.788 1.00 80.88 O
ATOM 11 C2' A B 64 55.328 36.446 124.321 1.00 83.49 C
ATOM 12 O2' A B 64 56.535 37.135 124.530 1.00 86.11 O
ATOM 13 C1' A B 64 55.564 35.504 123.144 1.00 83.97 C
ATOM 14 N9 A B 64 54.463 35.267 122.221 1.00 84.31 N
ATOM 15 C8 A B 64 53.194 34.821 122.481 1.00 85.18 C
ATOM 16 N7 A B 64 52.494 34.568 121.400 1.00 85.02 N
ATOM 17 C5 A B 64 53.352 34.906 120.362 1.00 84.34 C
ATOM 18 C6 A B 64 53.222 34.844 118.965 1.00 84.28 C
ATOM 19 N6 A B 64 52.144 34.368 118.345 1.00 85.06 N
ATOM 20 N1 A B 64 54.259 35.276 118.216 1.00 83.57 N
ATOM 21 C2 A B 64 55.355 35.717 118.838 1.00 83.86 C
ATOM 22 N3 A B 64 55.606 35.801 120.140 1.00 84.47 N
ATOM 23 C4 A B 64 54.551 35.374 120.856 1.00 84.39 C
ATOM 24 P G B 65 55.857 37.285 127.163 1.00 78.90 P
ATOM 25 OP1 G B 65 55.592 37.404 128.613 1.00 80.09 O
ATOM 26 OP2 G B 65 55.335 38.329 126.239 1.00 79.17 O
ATOM 27 O5' G B 65 57.436 37.183 126.997 1.00 76.22 O
TER
Atoms:
C2: (57.644,29.564,121.764)
OP1: (49.966,28.241,122.897)
OP2: (50.876,28.569,120.532)
C4: (57.096,29.469,119.502)
O5': (52.397,28.173,122.485)
C3': (54.148,29.826,124.252)
C1': (56.086,28.731,123.488)
O4': (55.035,27.785,123.538)
C5': (52.642,27.775,123.833)
P: (50.964,27.907,121.853)
O2: (58.420,29.842,122.690)
C4': (53.953,28.323,124.326)
C2': (55.665,29.940,124.326)
O2': (56.138,29.750,125.652)
N1: (56.395,29.015,122.076)
N3: (57.969,29.777,120.468)
N4: (57.468,29.665,118.237)
C6: (55.497,28.729,121.080)
C5: (55.804,28.937,119.793)
O3': (53.519,30.420,125.384)
OP1: (49.966,28.241,122.897)
OP2: (50.876,28.569,120.532)
C4: (57.096,29.469,119.502)
O5': (52.397,28.173,122.485)
C3': (54.148,29.826,124.252)
C1': (56.086,28.731,123.488)
O4': (55.035,27.785,123.538)
C5': (52.642,27.775,123.833)
P: (50.964,27.907,121.853)
O2: (58.420,29.842,122.690)
C4': (53.953,28.323,124.326)
C2': (55.665,29.940,124.326)
O2': (56.138,29.750,125.652)
N1: (56.395,29.015,122.076)
N3: (57.969,29.777,120.468)
N4: (57.468,29.665,118.237)
C6: (55.497,28.729,121.080)
C5: (55.804,28.937,119.793)
O3': (53.519,30.420,125.384)
OP1: (52.321,32.233,126.601)
OP2: (51.723,31.723,124.159)
C3': (54.988,35.460,125.438)
C1': (55.564,35.504,123.144)
C5': (55.129,32.931,125.478)
O4': (55.960,34.246,123.657)
C8: (53.194,34.821,122.481)
O2': (56.535,37.135,124.530)
C6: (53.222,34.844,118.965)
C5: (53.352,34.906,120.362)
C4: (54.551,35.374,120.856)
P: (52.743,31.821,125.234)
C4': (55.801,34.222,125.096)
C2': (55.328,36.446,124.321)
C2: (55.355,35.717,118.838)
N1: (54.259,35.276,118.216)
N3: (55.606,35.801,120.140)
N6: (52.144,34.368,118.345)
N7: (52.494,34.568,121.400)
N9: (54.463,35.267,122.221)
O5': (53.884,32.820,124.762)
O3': (55.321,35.811,126.788)
OP2: (51.723,31.723,124.159)
C3': (54.988,35.460,125.438)
C1': (55.564,35.504,123.144)
C5': (55.129,32.931,125.478)
O4': (55.960,34.246,123.657)
C8: (53.194,34.821,122.481)
O2': (56.535,37.135,124.530)
C6: (53.222,34.844,118.965)
C5: (53.352,34.906,120.362)
C4: (54.551,35.374,120.856)
P: (52.743,31.821,125.234)
C4': (55.801,34.222,125.096)
C2': (55.328,36.446,124.321)
C2: (55.355,35.717,118.838)
N1: (54.259,35.276,118.216)
N3: (55.606,35.801,120.140)
N6: (52.144,34.368,118.345)
N7: (52.494,34.568,121.400)
N9: (54.463,35.267,122.221)
O5': (53.884,32.820,124.762)
O3': (55.321,35.811,126.788)
Image (generated by PyMOL):