Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:963:964
Extra
PDB:
ATOM 1 O3' C A 62 50.683 26.023 121.206 1.00 62.96 O
ATOM 2 P C A 63 50.659 27.620 121.423 1.00 62.51 P
ATOM 3 OP1 C A 63 49.587 27.914 122.407 1.00 61.86 O
ATOM 4 OP2 C A 63 50.628 28.290 120.095 1.00 62.71 O
ATOM 5 O5' C A 63 52.060 27.930 122.116 1.00 59.79 O
ATOM 6 C5' C A 63 52.327 27.491 123.458 1.00 58.46 C
ATOM 7 C4' C A 63 53.645 28.042 123.939 1.00 58.53 C
ATOM 8 O4' C A 63 54.712 27.535 123.102 1.00 58.80 O
ATOM 9 C3' C A 63 53.801 29.550 123.865 1.00 60.63 C
ATOM 10 O3' C A 63 53.206 30.175 125.002 1.00 63.66 O
ATOM 11 C2' C A 63 55.317 29.718 123.840 1.00 59.61 C
ATOM 12 O2' C A 63 55.906 29.615 125.119 1.00 58.99 O
ATOM 13 C1' C A 63 55.746 28.502 123.016 1.00 59.02 C
ATOM 14 N1 C A 63 56.053 28.764 121.591 1.00 59.43 N
ATOM 15 C2 C A 63 57.336 29.238 121.249 1.00 58.17 C
ATOM 16 O2 C A 63 58.161 29.454 122.151 1.00 56.34 O
ATOM 17 N3 C A 63 57.638 29.446 119.943 1.00 57.25 N
ATOM 18 C4 C A 63 56.725 29.210 118.998 1.00 56.65 C
ATOM 19 N4 C A 63 57.073 29.419 117.726 1.00 54.85 N
ATOM 20 C5 C A 63 55.412 28.747 119.316 1.00 57.07 C
ATOM 21 C6 C A 63 55.122 28.540 120.611 1.00 58.50 C
ATOM 22 P A A 64 52.426 31.571 124.834 1.00 66.67 P
ATOM 23 OP1 A A 64 52.003 32.025 126.188 1.00 65.91 O
ATOM 24 OP2 A A 64 51.408 31.414 123.760 1.00 65.19 O
ATOM 25 O5' A A 64 53.543 32.578 124.310 1.00 67.92 O
TER
ATOM 1 O3' C B 63 53.206 30.175 125.002 1.00 63.66 O
ATOM 2 P A B 64 52.426 31.571 124.834 1.00 66.67 P
ATOM 3 OP1 A B 64 52.003 32.025 126.188 1.00 65.91 O
ATOM 4 OP2 A B 64 51.408 31.414 123.760 1.00 65.19 O
ATOM 5 O5' A B 64 53.543 32.578 124.310 1.00 67.92 O
ATOM 6 C5' A B 64 54.815 32.710 124.980 1.00 70.61 C
ATOM 7 C4' A B 64 55.482 33.999 124.560 1.00 72.01 C
ATOM 8 O4' A B 64 55.621 34.001 123.120 1.00 72.37 O
ATOM 9 C3' A B 64 54.696 35.253 124.912 1.00 72.06 C
ATOM 10 O3' A B 64 55.060 35.593 126.273 1.00 72.52 O
ATOM 11 C2' A B 64 55.021 36.223 123.772 1.00 72.21 C
ATOM 12 O2' A B 64 56.218 36.948 123.965 1.00 76.74 O
ATOM 13 C1' A B 64 55.260 35.263 122.600 1.00 71.36 C
ATOM 14 N9 A B 64 54.230 35.042 121.582 1.00 68.94 N
ATOM 15 C8 A B 64 52.999 34.447 121.705 1.00 67.68 C
ATOM 16 N7 A B 64 52.379 34.274 120.561 1.00 65.79 N
ATOM 17 C5 A B 64 53.246 34.821 119.626 1.00 66.53 C
ATOM 18 C6 A B 64 53.187 34.932 118.222 1.00 65.70 C
ATOM 19 N6 A B 64 52.185 34.460 117.479 1.00 65.93 N
ATOM 20 N1 A B 64 54.215 35.543 117.597 1.00 65.06 N
ATOM 21 C2 A B 64 55.232 35.996 118.332 1.00 64.42 C
ATOM 22 N3 A B 64 55.412 35.938 119.646 1.00 66.56 N
ATOM 23 C4 A B 64 54.372 35.330 120.244 1.00 67.73 C
ATOM 24 P G B 65 55.429 37.107 126.704 1.00 71.83 P
ATOM 25 OP1 G B 65 55.177 37.177 128.167 1.00 71.63 O
ATOM 26 OP2 G B 65 54.760 38.087 125.806 1.00 73.68 O
ATOM 27 O5' G B 65 57.009 37.199 126.507 1.00 68.48 O
TER
ATOM 2 P C A 63 50.659 27.620 121.423 1.00 62.51 P
ATOM 3 OP1 C A 63 49.587 27.914 122.407 1.00 61.86 O
ATOM 4 OP2 C A 63 50.628 28.290 120.095 1.00 62.71 O
ATOM 5 O5' C A 63 52.060 27.930 122.116 1.00 59.79 O
ATOM 6 C5' C A 63 52.327 27.491 123.458 1.00 58.46 C
ATOM 7 C4' C A 63 53.645 28.042 123.939 1.00 58.53 C
ATOM 8 O4' C A 63 54.712 27.535 123.102 1.00 58.80 O
ATOM 9 C3' C A 63 53.801 29.550 123.865 1.00 60.63 C
ATOM 10 O3' C A 63 53.206 30.175 125.002 1.00 63.66 O
ATOM 11 C2' C A 63 55.317 29.718 123.840 1.00 59.61 C
ATOM 12 O2' C A 63 55.906 29.615 125.119 1.00 58.99 O
ATOM 13 C1' C A 63 55.746 28.502 123.016 1.00 59.02 C
ATOM 14 N1 C A 63 56.053 28.764 121.591 1.00 59.43 N
ATOM 15 C2 C A 63 57.336 29.238 121.249 1.00 58.17 C
ATOM 16 O2 C A 63 58.161 29.454 122.151 1.00 56.34 O
ATOM 17 N3 C A 63 57.638 29.446 119.943 1.00 57.25 N
ATOM 18 C4 C A 63 56.725 29.210 118.998 1.00 56.65 C
ATOM 19 N4 C A 63 57.073 29.419 117.726 1.00 54.85 N
ATOM 20 C5 C A 63 55.412 28.747 119.316 1.00 57.07 C
ATOM 21 C6 C A 63 55.122 28.540 120.611 1.00 58.50 C
ATOM 22 P A A 64 52.426 31.571 124.834 1.00 66.67 P
ATOM 23 OP1 A A 64 52.003 32.025 126.188 1.00 65.91 O
ATOM 24 OP2 A A 64 51.408 31.414 123.760 1.00 65.19 O
ATOM 25 O5' A A 64 53.543 32.578 124.310 1.00 67.92 O
TER
ATOM 1 O3' C B 63 53.206 30.175 125.002 1.00 63.66 O
ATOM 2 P A B 64 52.426 31.571 124.834 1.00 66.67 P
ATOM 3 OP1 A B 64 52.003 32.025 126.188 1.00 65.91 O
ATOM 4 OP2 A B 64 51.408 31.414 123.760 1.00 65.19 O
ATOM 5 O5' A B 64 53.543 32.578 124.310 1.00 67.92 O
ATOM 6 C5' A B 64 54.815 32.710 124.980 1.00 70.61 C
ATOM 7 C4' A B 64 55.482 33.999 124.560 1.00 72.01 C
ATOM 8 O4' A B 64 55.621 34.001 123.120 1.00 72.37 O
ATOM 9 C3' A B 64 54.696 35.253 124.912 1.00 72.06 C
ATOM 10 O3' A B 64 55.060 35.593 126.273 1.00 72.52 O
ATOM 11 C2' A B 64 55.021 36.223 123.772 1.00 72.21 C
ATOM 12 O2' A B 64 56.218 36.948 123.965 1.00 76.74 O
ATOM 13 C1' A B 64 55.260 35.263 122.600 1.00 71.36 C
ATOM 14 N9 A B 64 54.230 35.042 121.582 1.00 68.94 N
ATOM 15 C8 A B 64 52.999 34.447 121.705 1.00 67.68 C
ATOM 16 N7 A B 64 52.379 34.274 120.561 1.00 65.79 N
ATOM 17 C5 A B 64 53.246 34.821 119.626 1.00 66.53 C
ATOM 18 C6 A B 64 53.187 34.932 118.222 1.00 65.70 C
ATOM 19 N6 A B 64 52.185 34.460 117.479 1.00 65.93 N
ATOM 20 N1 A B 64 54.215 35.543 117.597 1.00 65.06 N
ATOM 21 C2 A B 64 55.232 35.996 118.332 1.00 64.42 C
ATOM 22 N3 A B 64 55.412 35.938 119.646 1.00 66.56 N
ATOM 23 C4 A B 64 54.372 35.330 120.244 1.00 67.73 C
ATOM 24 P G B 65 55.429 37.107 126.704 1.00 71.83 P
ATOM 25 OP1 G B 65 55.177 37.177 128.167 1.00 71.63 O
ATOM 26 OP2 G B 65 54.760 38.087 125.806 1.00 73.68 O
ATOM 27 O5' G B 65 57.009 37.199 126.507 1.00 68.48 O
TER
Atoms:
C2: (57.336,29.238,121.249)
OP1: (49.587,27.914,122.407)
OP2: (50.628,28.290,120.095)
C4: (56.725,29.210,118.998)
O5': (52.060,27.930,122.116)
C3': (53.801,29.550,123.865)
C1': (55.746,28.502,123.016)
O4': (54.712,27.535,123.102)
C5': (52.327,27.491,123.458)
P: (50.659,27.620,121.423)
O2: (58.161,29.454,122.151)
C4': (53.645,28.042,123.939)
C2': (55.317,29.718,123.840)
O2': (55.906,29.615,125.119)
N1: (56.053,28.764,121.591)
N3: (57.638,29.446,119.943)
N4: (57.073,29.419,117.726)
C6: (55.122,28.540,120.611)
C5: (55.412,28.747,119.316)
O3': (53.206,30.175,125.002)
OP1: (49.587,27.914,122.407)
OP2: (50.628,28.290,120.095)
C4: (56.725,29.210,118.998)
O5': (52.060,27.930,122.116)
C3': (53.801,29.550,123.865)
C1': (55.746,28.502,123.016)
O4': (54.712,27.535,123.102)
C5': (52.327,27.491,123.458)
P: (50.659,27.620,121.423)
O2: (58.161,29.454,122.151)
C4': (53.645,28.042,123.939)
C2': (55.317,29.718,123.840)
O2': (55.906,29.615,125.119)
N1: (56.053,28.764,121.591)
N3: (57.638,29.446,119.943)
N4: (57.073,29.419,117.726)
C6: (55.122,28.540,120.611)
C5: (55.412,28.747,119.316)
O3': (53.206,30.175,125.002)
OP1: (52.003,32.025,126.188)
OP2: (51.408,31.414,123.760)
C3': (54.696,35.253,124.912)
C1': (55.260,35.263,122.600)
C5': (54.815,32.710,124.980)
O4': (55.621,34.001,123.120)
C8: (52.999,34.447,121.705)
O2': (56.218,36.948,123.965)
C6: (53.187,34.932,118.222)
C5: (53.246,34.821,119.626)
C4: (54.372,35.330,120.244)
P: (52.426,31.571,124.834)
C4': (55.482,33.999,124.560)
C2': (55.021,36.223,123.772)
C2: (55.232,35.996,118.332)
N1: (54.215,35.543,117.597)
N3: (55.412,35.938,119.646)
N6: (52.185,34.460,117.479)
N7: (52.379,34.274,120.561)
N9: (54.230,35.042,121.582)
O5': (53.543,32.578,124.310)
O3': (55.060,35.593,126.273)
OP2: (51.408,31.414,123.760)
C3': (54.696,35.253,124.912)
C1': (55.260,35.263,122.600)
C5': (54.815,32.710,124.980)
O4': (55.621,34.001,123.120)
C8: (52.999,34.447,121.705)
O2': (56.218,36.948,123.965)
C6: (53.187,34.932,118.222)
C5: (53.246,34.821,119.626)
C4: (54.372,35.330,120.244)
P: (52.426,31.571,124.834)
C4': (55.482,33.999,124.560)
C2': (55.021,36.223,123.772)
C2: (55.232,35.996,118.332)
N1: (54.215,35.543,117.597)
N3: (55.412,35.938,119.646)
N6: (52.185,34.460,117.479)
N7: (52.379,34.274,120.561)
N9: (54.230,35.042,121.582)
O5': (53.543,32.578,124.310)
O3': (55.060,35.593,126.273)
Image (generated by PyMOL):