Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:963:964
Extra
PDB:
ATOM 1 O3' C A 62 50.646 26.043 121.065 1.00 62.54 O
ATOM 2 P C A 63 50.697 27.643 121.257 1.00 63.54 P
ATOM 3 OP1 C A 63 49.673 28.022 122.258 1.00 64.25 O
ATOM 4 OP2 C A 63 50.684 28.291 119.917 1.00 63.43 O
ATOM 5 O5' C A 63 52.114 27.899 121.931 1.00 62.75 O
ATOM 6 C5' C A 63 52.384 27.428 123.258 1.00 62.76 C
ATOM 7 C4' C A 63 53.712 27.949 123.731 1.00 63.29 C
ATOM 8 O4' C A 63 54.758 27.432 122.875 1.00 63.53 O
ATOM 9 C3' C A 63 53.876 29.455 123.651 1.00 64.76 C
ATOM 10 O3' C A 63 53.301 30.077 124.798 1.00 67.36 O
ATOM 11 C2' C A 63 55.391 29.616 123.592 1.00 64.16 C
ATOM 12 O2' C A 63 56.002 29.530 124.862 1.00 63.84 O
ATOM 13 C1' C A 63 55.795 28.391 122.768 1.00 64.14 C
ATOM 14 N1 C A 63 56.085 28.634 121.339 1.00 64.35 N
ATOM 15 C2 C A 63 57.340 29.153 120.988 1.00 63.99 C
ATOM 16 O2 C A 63 58.149 29.432 121.888 1.00 63.28 O
ATOM 17 N3 C A 63 57.639 29.339 119.677 1.00 64.08 N
ATOM 18 C4 C A 63 56.740 29.038 118.737 1.00 62.94 C
ATOM 19 N4 C A 63 57.086 29.219 117.460 1.00 61.38 N
ATOM 20 C5 C A 63 55.447 28.532 119.065 1.00 63.64 C
ATOM 21 C6 C A 63 55.163 28.348 120.366 1.00 64.39 C
ATOM 22 P A A 64 52.407 31.402 124.629 1.00 69.84 P
ATOM 23 OP1 A A 64 51.908 31.786 125.979 1.00 69.86 O
ATOM 24 OP2 A A 64 51.434 31.178 123.522 1.00 69.34 O
ATOM 25 O5' A A 64 53.452 32.511 124.166 1.00 71.32 O
TER
ATOM 1 O3' C B 63 53.301 30.077 124.798 1.00 67.36 O
ATOM 2 P A B 64 52.407 31.402 124.629 1.00 69.84 P
ATOM 3 OP1 A B 64 51.908 31.786 125.979 1.00 69.86 O
ATOM 4 OP2 A B 64 51.434 31.178 123.522 1.00 69.34 O
ATOM 5 O5' A B 64 53.452 32.511 124.166 1.00 71.32 O
ATOM 6 C5' A B 64 54.758 32.607 124.775 1.00 74.28 C
ATOM 7 C4' A B 64 55.438 33.885 124.344 1.00 75.63 C
ATOM 8 O4' A B 64 55.588 33.886 122.905 1.00 77.04 O
ATOM 9 C3' A B 64 54.674 35.150 124.692 1.00 75.49 C
ATOM 10 O3' A B 64 55.018 35.471 126.057 1.00 75.06 O
ATOM 11 C2' A B 64 55.045 36.115 123.564 1.00 76.61 C
ATOM 12 O2' A B 64 56.279 36.771 123.770 1.00 80.39 O
ATOM 13 C1' A B 64 55.246 35.155 122.385 1.00 76.83 C
ATOM 14 N9 A B 64 54.175 34.948 121.409 1.00 76.24 N
ATOM 15 C8 A B 64 52.931 34.399 121.597 1.00 75.68 C
ATOM 16 N7 A B 64 52.263 34.215 120.483 1.00 75.63 N
ATOM 17 C5 A B 64 53.111 34.705 119.499 1.00 75.72 C
ATOM 18 C6 A B 64 53.000 34.775 118.095 1.00 75.63 C
ATOM 19 N6 A B 64 51.958 34.307 117.407 1.00 76.06 N
ATOM 20 N1 A B 64 54.019 35.340 117.413 1.00 75.42 N
ATOM 21 C2 A B 64 55.077 35.783 118.095 1.00 74.71 C
ATOM 22 N3 A B 64 55.307 35.756 119.404 1.00 75.88 N
ATOM 23 C4 A B 64 54.274 35.196 120.059 1.00 76.14 C
ATOM 24 P G B 65 55.465 36.962 126.492 1.00 74.80 P
ATOM 25 OP1 G B 65 55.201 37.052 127.953 1.00 74.60 O
ATOM 26 OP2 G B 65 54.871 37.979 125.583 1.00 76.28 O
ATOM 27 O5' G B 65 57.048 36.962 126.314 1.00 71.57 O
TER
ATOM 2 P C A 63 50.697 27.643 121.257 1.00 63.54 P
ATOM 3 OP1 C A 63 49.673 28.022 122.258 1.00 64.25 O
ATOM 4 OP2 C A 63 50.684 28.291 119.917 1.00 63.43 O
ATOM 5 O5' C A 63 52.114 27.899 121.931 1.00 62.75 O
ATOM 6 C5' C A 63 52.384 27.428 123.258 1.00 62.76 C
ATOM 7 C4' C A 63 53.712 27.949 123.731 1.00 63.29 C
ATOM 8 O4' C A 63 54.758 27.432 122.875 1.00 63.53 O
ATOM 9 C3' C A 63 53.876 29.455 123.651 1.00 64.76 C
ATOM 10 O3' C A 63 53.301 30.077 124.798 1.00 67.36 O
ATOM 11 C2' C A 63 55.391 29.616 123.592 1.00 64.16 C
ATOM 12 O2' C A 63 56.002 29.530 124.862 1.00 63.84 O
ATOM 13 C1' C A 63 55.795 28.391 122.768 1.00 64.14 C
ATOM 14 N1 C A 63 56.085 28.634 121.339 1.00 64.35 N
ATOM 15 C2 C A 63 57.340 29.153 120.988 1.00 63.99 C
ATOM 16 O2 C A 63 58.149 29.432 121.888 1.00 63.28 O
ATOM 17 N3 C A 63 57.639 29.339 119.677 1.00 64.08 N
ATOM 18 C4 C A 63 56.740 29.038 118.737 1.00 62.94 C
ATOM 19 N4 C A 63 57.086 29.219 117.460 1.00 61.38 N
ATOM 20 C5 C A 63 55.447 28.532 119.065 1.00 63.64 C
ATOM 21 C6 C A 63 55.163 28.348 120.366 1.00 64.39 C
ATOM 22 P A A 64 52.407 31.402 124.629 1.00 69.84 P
ATOM 23 OP1 A A 64 51.908 31.786 125.979 1.00 69.86 O
ATOM 24 OP2 A A 64 51.434 31.178 123.522 1.00 69.34 O
ATOM 25 O5' A A 64 53.452 32.511 124.166 1.00 71.32 O
TER
ATOM 1 O3' C B 63 53.301 30.077 124.798 1.00 67.36 O
ATOM 2 P A B 64 52.407 31.402 124.629 1.00 69.84 P
ATOM 3 OP1 A B 64 51.908 31.786 125.979 1.00 69.86 O
ATOM 4 OP2 A B 64 51.434 31.178 123.522 1.00 69.34 O
ATOM 5 O5' A B 64 53.452 32.511 124.166 1.00 71.32 O
ATOM 6 C5' A B 64 54.758 32.607 124.775 1.00 74.28 C
ATOM 7 C4' A B 64 55.438 33.885 124.344 1.00 75.63 C
ATOM 8 O4' A B 64 55.588 33.886 122.905 1.00 77.04 O
ATOM 9 C3' A B 64 54.674 35.150 124.692 1.00 75.49 C
ATOM 10 O3' A B 64 55.018 35.471 126.057 1.00 75.06 O
ATOM 11 C2' A B 64 55.045 36.115 123.564 1.00 76.61 C
ATOM 12 O2' A B 64 56.279 36.771 123.770 1.00 80.39 O
ATOM 13 C1' A B 64 55.246 35.155 122.385 1.00 76.83 C
ATOM 14 N9 A B 64 54.175 34.948 121.409 1.00 76.24 N
ATOM 15 C8 A B 64 52.931 34.399 121.597 1.00 75.68 C
ATOM 16 N7 A B 64 52.263 34.215 120.483 1.00 75.63 N
ATOM 17 C5 A B 64 53.111 34.705 119.499 1.00 75.72 C
ATOM 18 C6 A B 64 53.000 34.775 118.095 1.00 75.63 C
ATOM 19 N6 A B 64 51.958 34.307 117.407 1.00 76.06 N
ATOM 20 N1 A B 64 54.019 35.340 117.413 1.00 75.42 N
ATOM 21 C2 A B 64 55.077 35.783 118.095 1.00 74.71 C
ATOM 22 N3 A B 64 55.307 35.756 119.404 1.00 75.88 N
ATOM 23 C4 A B 64 54.274 35.196 120.059 1.00 76.14 C
ATOM 24 P G B 65 55.465 36.962 126.492 1.00 74.80 P
ATOM 25 OP1 G B 65 55.201 37.052 127.953 1.00 74.60 O
ATOM 26 OP2 G B 65 54.871 37.979 125.583 1.00 76.28 O
ATOM 27 O5' G B 65 57.048 36.962 126.314 1.00 71.57 O
TER
Atoms:
C2: (57.340,29.153,120.988)
OP1: (49.673,28.022,122.258)
OP2: (50.684,28.291,119.917)
C4: (56.740,29.038,118.737)
O5': (52.114,27.899,121.931)
C3': (53.876,29.455,123.651)
C1': (55.795,28.391,122.768)
O4': (54.758,27.432,122.875)
C5': (52.384,27.428,123.258)
P: (50.697,27.643,121.257)
O2: (58.149,29.432,121.888)
C4': (53.712,27.949,123.731)
C2': (55.391,29.616,123.592)
O2': (56.002,29.530,124.862)
N1: (56.085,28.634,121.339)
N3: (57.639,29.339,119.677)
N4: (57.086,29.219,117.460)
C6: (55.163,28.348,120.366)
C5: (55.447,28.532,119.065)
O3': (53.301,30.077,124.798)
OP1: (49.673,28.022,122.258)
OP2: (50.684,28.291,119.917)
C4: (56.740,29.038,118.737)
O5': (52.114,27.899,121.931)
C3': (53.876,29.455,123.651)
C1': (55.795,28.391,122.768)
O4': (54.758,27.432,122.875)
C5': (52.384,27.428,123.258)
P: (50.697,27.643,121.257)
O2: (58.149,29.432,121.888)
C4': (53.712,27.949,123.731)
C2': (55.391,29.616,123.592)
O2': (56.002,29.530,124.862)
N1: (56.085,28.634,121.339)
N3: (57.639,29.339,119.677)
N4: (57.086,29.219,117.460)
C6: (55.163,28.348,120.366)
C5: (55.447,28.532,119.065)
O3': (53.301,30.077,124.798)
OP1: (51.908,31.786,125.979)
OP2: (51.434,31.178,123.522)
C3': (54.674,35.150,124.692)
C1': (55.246,35.155,122.385)
C5': (54.758,32.607,124.775)
O4': (55.588,33.886,122.905)
C8: (52.931,34.399,121.597)
O2': (56.279,36.771,123.770)
C6: (53.000,34.775,118.095)
C5: (53.111,34.705,119.499)
C4: (54.274,35.196,120.059)
P: (52.407,31.402,124.629)
C4': (55.438,33.885,124.344)
C2': (55.045,36.115,123.564)
C2: (55.077,35.783,118.095)
N1: (54.019,35.340,117.413)
N3: (55.307,35.756,119.404)
N6: (51.958,34.307,117.407)
N7: (52.263,34.215,120.483)
N9: (54.175,34.948,121.409)
O5': (53.452,32.511,124.166)
O3': (55.018,35.471,126.057)
OP2: (51.434,31.178,123.522)
C3': (54.674,35.150,124.692)
C1': (55.246,35.155,122.385)
C5': (54.758,32.607,124.775)
O4': (55.588,33.886,122.905)
C8: (52.931,34.399,121.597)
O2': (56.279,36.771,123.770)
C6: (53.000,34.775,118.095)
C5: (53.111,34.705,119.499)
C4: (54.274,35.196,120.059)
P: (52.407,31.402,124.629)
C4': (55.438,33.885,124.344)
C2': (55.045,36.115,123.564)
C2: (55.077,35.783,118.095)
N1: (54.019,35.340,117.413)
N3: (55.307,35.756,119.404)
N6: (51.958,34.307,117.407)
N7: (52.263,34.215,120.483)
N9: (54.175,34.948,121.409)
O5': (53.452,32.511,124.166)
O3': (55.018,35.471,126.057)
Image (generated by PyMOL):