Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:963:964
Extra
PDB:
ATOM 1 O3' C A 62 50.946 26.166 121.626 1.00 71.85 O
ATOM 2 P C A 63 50.924 27.765 121.856 1.00 72.22 P
ATOM 3 OP1 C A 63 49.938 28.059 122.923 1.00 72.31 O
ATOM 4 OP2 C A 63 50.806 28.460 120.550 1.00 72.89 O
ATOM 5 O5' C A 63 52.361 28.072 122.467 1.00 71.16 O
ATOM 6 C5' C A 63 52.717 27.577 123.766 1.00 69.59 C
ATOM 7 C4' C A 63 54.030 28.166 124.209 1.00 69.29 C
ATOM 8 O4' C A 63 55.080 27.726 123.317 1.00 69.50 O
ATOM 9 C3' C A 63 54.115 29.680 124.170 1.00 69.65 C
ATOM 10 O3' C A 63 53.548 30.230 125.357 1.00 71.87 O
ATOM 11 C2' C A 63 55.618 29.912 124.092 1.00 69.49 C
ATOM 12 O2' C A 63 56.240 29.777 125.353 1.00 69.16 O
ATOM 13 C1' C A 63 56.067 28.737 123.221 1.00 69.46 C
ATOM 14 N1 C A 63 56.343 29.015 121.792 1.00 69.71 N
ATOM 15 C2 C A 63 57.625 29.471 121.421 1.00 69.35 C
ATOM 16 O2 C A 63 58.468 29.699 122.304 1.00 68.90 O
ATOM 17 N3 C A 63 57.908 29.652 120.109 1.00 68.54 N
ATOM 18 C4 C A 63 56.978 29.412 119.185 1.00 67.37 C
ATOM 19 N4 C A 63 57.316 29.572 117.910 1.00 67.11 N
ATOM 20 C5 C A 63 55.661 28.989 119.531 1.00 68.24 C
ATOM 21 C6 C A 63 55.387 28.808 120.832 1.00 69.78 C
ATOM 22 P A A 64 52.695 31.592 125.289 1.00 73.77 P
ATOM 23 OP1 A A 64 52.374 31.985 126.687 1.00 74.84 O
ATOM 24 OP2 A A 64 51.588 31.424 124.306 1.00 72.11 O
ATOM 25 O5' A A 64 53.730 32.667 124.729 1.00 75.47 O
TER
ATOM 1 O3' C B 63 53.548 30.230 125.357 1.00 71.87 O
ATOM 2 P A B 64 52.695 31.592 125.289 1.00 73.77 P
ATOM 3 OP1 A B 64 52.374 31.985 126.687 1.00 74.84 O
ATOM 4 OP2 A B 64 51.588 31.424 124.306 1.00 72.11 O
ATOM 5 O5' A B 64 53.730 32.667 124.729 1.00 75.47 O
ATOM 6 C5' A B 64 55.059 32.799 125.293 1.00 78.15 C
ATOM 7 C4' A B 64 55.670 34.120 124.881 1.00 79.75 C
ATOM 8 O4' A B 64 55.769 34.182 123.439 1.00 80.62 O
ATOM 9 C3' A B 64 54.865 35.332 125.316 1.00 79.67 C
ATOM 10 O3' A B 64 55.306 35.616 126.663 1.00 79.23 O
ATOM 11 C2' A B 64 55.084 36.351 124.189 1.00 80.06 C
ATOM 12 O2' A B 64 56.235 37.154 124.339 1.00 83.33 O
ATOM 13 C1' A B 64 55.328 35.441 122.978 1.00 80.11 C
ATOM 14 N9 A B 64 54.280 35.197 121.985 1.00 79.66 N
ATOM 15 C8 A B 64 53.046 34.614 122.138 1.00 79.33 C
ATOM 16 N7 A B 64 52.410 34.420 121.007 1.00 78.28 N
ATOM 17 C5 A B 64 53.270 34.941 120.048 1.00 79.00 C
ATOM 18 C6 A B 64 53.194 35.026 118.644 1.00 79.13 C
ATOM 19 N6 A B 64 52.177 34.550 117.923 1.00 80.79 N
ATOM 20 N1 A B 64 54.219 35.615 117.994 1.00 78.38 N
ATOM 21 C2 A B 64 55.248 36.072 118.706 1.00 77.12 C
ATOM 22 N3 A B 64 55.444 36.039 120.017 1.00 78.35 N
ATOM 23 C4 A B 64 54.408 35.452 120.640 1.00 79.25 C
ATOM 24 P G B 65 55.701 37.111 127.133 1.00 79.28 P
ATOM 25 OP1 G B 65 55.546 37.102 128.609 1.00 80.09 O
ATOM 26 OP2 G B 65 54.981 38.135 126.330 1.00 80.68 O
ATOM 27 O5' G B 65 57.264 37.230 126.855 1.00 76.14 O
TER
ATOM 2 P C A 63 50.924 27.765 121.856 1.00 72.22 P
ATOM 3 OP1 C A 63 49.938 28.059 122.923 1.00 72.31 O
ATOM 4 OP2 C A 63 50.806 28.460 120.550 1.00 72.89 O
ATOM 5 O5' C A 63 52.361 28.072 122.467 1.00 71.16 O
ATOM 6 C5' C A 63 52.717 27.577 123.766 1.00 69.59 C
ATOM 7 C4' C A 63 54.030 28.166 124.209 1.00 69.29 C
ATOM 8 O4' C A 63 55.080 27.726 123.317 1.00 69.50 O
ATOM 9 C3' C A 63 54.115 29.680 124.170 1.00 69.65 C
ATOM 10 O3' C A 63 53.548 30.230 125.357 1.00 71.87 O
ATOM 11 C2' C A 63 55.618 29.912 124.092 1.00 69.49 C
ATOM 12 O2' C A 63 56.240 29.777 125.353 1.00 69.16 O
ATOM 13 C1' C A 63 56.067 28.737 123.221 1.00 69.46 C
ATOM 14 N1 C A 63 56.343 29.015 121.792 1.00 69.71 N
ATOM 15 C2 C A 63 57.625 29.471 121.421 1.00 69.35 C
ATOM 16 O2 C A 63 58.468 29.699 122.304 1.00 68.90 O
ATOM 17 N3 C A 63 57.908 29.652 120.109 1.00 68.54 N
ATOM 18 C4 C A 63 56.978 29.412 119.185 1.00 67.37 C
ATOM 19 N4 C A 63 57.316 29.572 117.910 1.00 67.11 N
ATOM 20 C5 C A 63 55.661 28.989 119.531 1.00 68.24 C
ATOM 21 C6 C A 63 55.387 28.808 120.832 1.00 69.78 C
ATOM 22 P A A 64 52.695 31.592 125.289 1.00 73.77 P
ATOM 23 OP1 A A 64 52.374 31.985 126.687 1.00 74.84 O
ATOM 24 OP2 A A 64 51.588 31.424 124.306 1.00 72.11 O
ATOM 25 O5' A A 64 53.730 32.667 124.729 1.00 75.47 O
TER
ATOM 1 O3' C B 63 53.548 30.230 125.357 1.00 71.87 O
ATOM 2 P A B 64 52.695 31.592 125.289 1.00 73.77 P
ATOM 3 OP1 A B 64 52.374 31.985 126.687 1.00 74.84 O
ATOM 4 OP2 A B 64 51.588 31.424 124.306 1.00 72.11 O
ATOM 5 O5' A B 64 53.730 32.667 124.729 1.00 75.47 O
ATOM 6 C5' A B 64 55.059 32.799 125.293 1.00 78.15 C
ATOM 7 C4' A B 64 55.670 34.120 124.881 1.00 79.75 C
ATOM 8 O4' A B 64 55.769 34.182 123.439 1.00 80.62 O
ATOM 9 C3' A B 64 54.865 35.332 125.316 1.00 79.67 C
ATOM 10 O3' A B 64 55.306 35.616 126.663 1.00 79.23 O
ATOM 11 C2' A B 64 55.084 36.351 124.189 1.00 80.06 C
ATOM 12 O2' A B 64 56.235 37.154 124.339 1.00 83.33 O
ATOM 13 C1' A B 64 55.328 35.441 122.978 1.00 80.11 C
ATOM 14 N9 A B 64 54.280 35.197 121.985 1.00 79.66 N
ATOM 15 C8 A B 64 53.046 34.614 122.138 1.00 79.33 C
ATOM 16 N7 A B 64 52.410 34.420 121.007 1.00 78.28 N
ATOM 17 C5 A B 64 53.270 34.941 120.048 1.00 79.00 C
ATOM 18 C6 A B 64 53.194 35.026 118.644 1.00 79.13 C
ATOM 19 N6 A B 64 52.177 34.550 117.923 1.00 80.79 N
ATOM 20 N1 A B 64 54.219 35.615 117.994 1.00 78.38 N
ATOM 21 C2 A B 64 55.248 36.072 118.706 1.00 77.12 C
ATOM 22 N3 A B 64 55.444 36.039 120.017 1.00 78.35 N
ATOM 23 C4 A B 64 54.408 35.452 120.640 1.00 79.25 C
ATOM 24 P G B 65 55.701 37.111 127.133 1.00 79.28 P
ATOM 25 OP1 G B 65 55.546 37.102 128.609 1.00 80.09 O
ATOM 26 OP2 G B 65 54.981 38.135 126.330 1.00 80.68 O
ATOM 27 O5' G B 65 57.264 37.230 126.855 1.00 76.14 O
TER
Atoms:
C2: (57.625,29.471,121.421)
OP1: (49.938,28.059,122.923)
OP2: (50.806,28.460,120.550)
C4: (56.978,29.412,119.185)
O5': (52.361,28.072,122.467)
C3': (54.115,29.680,124.170)
C1': (56.067,28.737,123.221)
O4': (55.080,27.726,123.317)
C5': (52.717,27.577,123.766)
P: (50.924,27.765,121.856)
O2: (58.468,29.699,122.304)
C4': (54.030,28.166,124.209)
C2': (55.618,29.912,124.092)
O2': (56.240,29.777,125.353)
N1: (56.343,29.015,121.792)
N3: (57.908,29.652,120.109)
N4: (57.316,29.572,117.910)
C6: (55.387,28.808,120.832)
C5: (55.661,28.989,119.531)
O3': (53.548,30.230,125.357)
OP1: (49.938,28.059,122.923)
OP2: (50.806,28.460,120.550)
C4: (56.978,29.412,119.185)
O5': (52.361,28.072,122.467)
C3': (54.115,29.680,124.170)
C1': (56.067,28.737,123.221)
O4': (55.080,27.726,123.317)
C5': (52.717,27.577,123.766)
P: (50.924,27.765,121.856)
O2: (58.468,29.699,122.304)
C4': (54.030,28.166,124.209)
C2': (55.618,29.912,124.092)
O2': (56.240,29.777,125.353)
N1: (56.343,29.015,121.792)
N3: (57.908,29.652,120.109)
N4: (57.316,29.572,117.910)
C6: (55.387,28.808,120.832)
C5: (55.661,28.989,119.531)
O3': (53.548,30.230,125.357)
OP1: (52.374,31.985,126.687)
OP2: (51.588,31.424,124.306)
C3': (54.865,35.332,125.316)
C1': (55.328,35.441,122.978)
C5': (55.059,32.799,125.293)
O4': (55.769,34.182,123.439)
C8: (53.046,34.614,122.138)
O2': (56.235,37.154,124.339)
C6: (53.194,35.026,118.644)
C5: (53.270,34.941,120.048)
C4: (54.408,35.452,120.640)
P: (52.695,31.592,125.289)
C4': (55.670,34.120,124.881)
C2': (55.084,36.351,124.189)
C2: (55.248,36.072,118.706)
N1: (54.219,35.615,117.994)
N3: (55.444,36.039,120.017)
N6: (52.177,34.550,117.923)
N7: (52.410,34.420,121.007)
N9: (54.280,35.197,121.985)
O5': (53.730,32.667,124.729)
O3': (55.306,35.616,126.663)
OP2: (51.588,31.424,124.306)
C3': (54.865,35.332,125.316)
C1': (55.328,35.441,122.978)
C5': (55.059,32.799,125.293)
O4': (55.769,34.182,123.439)
C8: (53.046,34.614,122.138)
O2': (56.235,37.154,124.339)
C6: (53.194,35.026,118.644)
C5: (53.270,34.941,120.048)
C4: (54.408,35.452,120.640)
P: (52.695,31.592,125.289)
C4': (55.670,34.120,124.881)
C2': (55.084,36.351,124.189)
C2: (55.248,36.072,118.706)
N1: (54.219,35.615,117.994)
N3: (55.444,36.039,120.017)
N6: (52.177,34.550,117.923)
N7: (52.410,34.420,121.007)
N9: (54.280,35.197,121.985)
O5': (53.730,32.667,124.729)
O3': (55.306,35.616,126.663)
Image (generated by PyMOL):