Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ6:0541:0542
Extra
PDB:
ATOM 1 O3' A A 540 2.580 124.929 72.348 1.00 55.74 O
ATOM 2 P G A 541 2.663 123.655 73.323 1.00 55.12 P
ATOM 3 OP1 G A 541 3.962 123.706 74.010 1.00 58.74 O
ATOM 4 OP2 G A 541 2.304 122.464 72.519 1.00 56.40 O
ATOM 5 O5' G A 541 1.536 123.877 74.428 1.00 57.80 O
ATOM 6 C5' G A 541 1.853 124.484 75.699 1.00 56.55 C
ATOM 7 C4' G A 541 1.820 123.451 76.810 1.00 56.83 C
ATOM 8 O4' G A 541 2.642 123.940 77.904 1.00 55.90 O
ATOM 9 C3' G A 541 0.479 123.140 77.474 1.00 56.73 C
ATOM 10 O3' G A 541 -0.323 122.188 76.774 1.00 59.12 O
ATOM 11 C2' G A 541 0.924 122.595 78.825 1.00 54.28 C
ATOM 12 O2' G A 541 1.419 121.273 78.749 1.00 50.65 O
ATOM 13 C1' G A 541 2.095 123.520 79.141 1.00 52.16 C
ATOM 14 N9 G A 541 1.720 124.706 79.904 1.00 47.30 N
ATOM 15 C8 G A 541 1.808 126.015 79.500 1.00 47.19 C
ATOM 16 N7 G A 541 1.457 126.863 80.429 1.00 46.92 N
ATOM 17 C5 G A 541 1.106 126.063 81.507 1.00 46.19 C
ATOM 18 C6 G A 541 0.669 126.416 82.809 1.00 46.21 C
ATOM 19 O6 G A 541 0.526 127.543 83.298 1.00 46.17 O
ATOM 20 N1 G A 541 0.406 125.292 83.579 1.00 45.91 N
ATOM 21 C2 G A 541 0.561 123.996 83.162 1.00 47.29 C
ATOM 22 N2 G A 541 0.250 123.047 84.060 1.00 48.52 N
ATOM 23 N3 G A 541 0.989 123.652 81.957 1.00 46.29 N
ATOM 24 C4 G A 541 1.241 124.729 81.189 1.00 46.33 C
ATOM 25 P G A 542 -1.925 122.165 77.003 1.00 59.76 P
ATOM 26 OP1 G A 542 -2.429 120.910 76.382 1.00 57.91 O
ATOM 27 OP2 G A 542 -2.481 123.470 76.577 1.00 57.89 O
ATOM 28 O5' G A 542 -2.124 122.052 78.583 1.00 60.38 O
TER
ATOM 1 O3' G B 541 -0.323 122.188 76.774 1.00 59.12 O
ATOM 2 P G B 542 -1.925 122.165 77.003 1.00 59.76 P
ATOM 3 OP1 G B 542 -2.429 120.910 76.382 1.00 57.91 O
ATOM 4 OP2 G B 542 -2.481 123.470 76.577 1.00 57.89 O
ATOM 5 O5' G B 542 -2.124 122.052 78.583 1.00 60.38 O
ATOM 6 C5' G B 542 -1.803 120.829 79.295 1.00 59.42 C
ATOM 7 C4' G B 542 -2.454 120.815 80.667 1.00 58.45 C
ATOM 8 O4' G B 542 -1.995 121.954 81.461 1.00 56.73 O
ATOM 9 C3' G B 542 -3.979 120.883 80.686 1.00 59.40 C
ATOM 10 O3' G B 542 -4.471 120.126 81.787 1.00 63.73 O
ATOM 11 C2' G B 542 -4.234 122.359 80.957 1.00 57.29 C
ATOM 12 O2' G B 542 -5.489 122.631 81.539 1.00 58.27 O
ATOM 13 C1' G B 542 -3.114 122.668 81.944 1.00 55.37 C
ATOM 14 N9 G B 542 -2.801 124.090 81.997 1.00 52.35 N
ATOM 15 C8 G B 542 -2.285 124.856 80.989 1.00 52.36 C
ATOM 16 N7 G B 542 -2.180 126.117 81.305 1.00 52.69 N
ATOM 17 C5 G B 542 -2.642 126.184 82.608 1.00 50.74 C
ATOM 18 C6 G B 542 -2.770 127.295 83.475 1.00 52.07 C
ATOM 19 O6 G B 542 -2.507 128.488 83.249 1.00 52.20 O
ATOM 20 N1 G B 542 -3.262 126.917 84.717 1.00 51.85 N
ATOM 21 C2 G B 542 -3.591 125.635 85.076 1.00 52.18 C
ATOM 22 N2 G B 542 -4.038 125.473 86.329 1.00 51.46 N
ATOM 23 N3 G B 542 -3.487 124.590 84.269 1.00 50.97 N
ATOM 24 C4 G B 542 -3.009 124.938 83.059 1.00 50.96 C
ATOM 25 P U B 543 -4.705 118.547 81.628 1.00 66.38 P
ATOM 26 OP1 U B 543 -4.454 118.212 80.198 1.00 67.93 O
ATOM 27 OP2 U B 543 -6.017 118.207 82.239 1.00 68.63 O
ATOM 28 O5' U B 543 -3.548 117.907 82.519 1.00 64.41 O
TER
ATOM 2 P G A 541 2.663 123.655 73.323 1.00 55.12 P
ATOM 3 OP1 G A 541 3.962 123.706 74.010 1.00 58.74 O
ATOM 4 OP2 G A 541 2.304 122.464 72.519 1.00 56.40 O
ATOM 5 O5' G A 541 1.536 123.877 74.428 1.00 57.80 O
ATOM 6 C5' G A 541 1.853 124.484 75.699 1.00 56.55 C
ATOM 7 C4' G A 541 1.820 123.451 76.810 1.00 56.83 C
ATOM 8 O4' G A 541 2.642 123.940 77.904 1.00 55.90 O
ATOM 9 C3' G A 541 0.479 123.140 77.474 1.00 56.73 C
ATOM 10 O3' G A 541 -0.323 122.188 76.774 1.00 59.12 O
ATOM 11 C2' G A 541 0.924 122.595 78.825 1.00 54.28 C
ATOM 12 O2' G A 541 1.419 121.273 78.749 1.00 50.65 O
ATOM 13 C1' G A 541 2.095 123.520 79.141 1.00 52.16 C
ATOM 14 N9 G A 541 1.720 124.706 79.904 1.00 47.30 N
ATOM 15 C8 G A 541 1.808 126.015 79.500 1.00 47.19 C
ATOM 16 N7 G A 541 1.457 126.863 80.429 1.00 46.92 N
ATOM 17 C5 G A 541 1.106 126.063 81.507 1.00 46.19 C
ATOM 18 C6 G A 541 0.669 126.416 82.809 1.00 46.21 C
ATOM 19 O6 G A 541 0.526 127.543 83.298 1.00 46.17 O
ATOM 20 N1 G A 541 0.406 125.292 83.579 1.00 45.91 N
ATOM 21 C2 G A 541 0.561 123.996 83.162 1.00 47.29 C
ATOM 22 N2 G A 541 0.250 123.047 84.060 1.00 48.52 N
ATOM 23 N3 G A 541 0.989 123.652 81.957 1.00 46.29 N
ATOM 24 C4 G A 541 1.241 124.729 81.189 1.00 46.33 C
ATOM 25 P G A 542 -1.925 122.165 77.003 1.00 59.76 P
ATOM 26 OP1 G A 542 -2.429 120.910 76.382 1.00 57.91 O
ATOM 27 OP2 G A 542 -2.481 123.470 76.577 1.00 57.89 O
ATOM 28 O5' G A 542 -2.124 122.052 78.583 1.00 60.38 O
TER
ATOM 1 O3' G B 541 -0.323 122.188 76.774 1.00 59.12 O
ATOM 2 P G B 542 -1.925 122.165 77.003 1.00 59.76 P
ATOM 3 OP1 G B 542 -2.429 120.910 76.382 1.00 57.91 O
ATOM 4 OP2 G B 542 -2.481 123.470 76.577 1.00 57.89 O
ATOM 5 O5' G B 542 -2.124 122.052 78.583 1.00 60.38 O
ATOM 6 C5' G B 542 -1.803 120.829 79.295 1.00 59.42 C
ATOM 7 C4' G B 542 -2.454 120.815 80.667 1.00 58.45 C
ATOM 8 O4' G B 542 -1.995 121.954 81.461 1.00 56.73 O
ATOM 9 C3' G B 542 -3.979 120.883 80.686 1.00 59.40 C
ATOM 10 O3' G B 542 -4.471 120.126 81.787 1.00 63.73 O
ATOM 11 C2' G B 542 -4.234 122.359 80.957 1.00 57.29 C
ATOM 12 O2' G B 542 -5.489 122.631 81.539 1.00 58.27 O
ATOM 13 C1' G B 542 -3.114 122.668 81.944 1.00 55.37 C
ATOM 14 N9 G B 542 -2.801 124.090 81.997 1.00 52.35 N
ATOM 15 C8 G B 542 -2.285 124.856 80.989 1.00 52.36 C
ATOM 16 N7 G B 542 -2.180 126.117 81.305 1.00 52.69 N
ATOM 17 C5 G B 542 -2.642 126.184 82.608 1.00 50.74 C
ATOM 18 C6 G B 542 -2.770 127.295 83.475 1.00 52.07 C
ATOM 19 O6 G B 542 -2.507 128.488 83.249 1.00 52.20 O
ATOM 20 N1 G B 542 -3.262 126.917 84.717 1.00 51.85 N
ATOM 21 C2 G B 542 -3.591 125.635 85.076 1.00 52.18 C
ATOM 22 N2 G B 542 -4.038 125.473 86.329 1.00 51.46 N
ATOM 23 N3 G B 542 -3.487 124.590 84.269 1.00 50.97 N
ATOM 24 C4 G B 542 -3.009 124.938 83.059 1.00 50.96 C
ATOM 25 P U B 543 -4.705 118.547 81.628 1.00 66.38 P
ATOM 26 OP1 U B 543 -4.454 118.212 80.198 1.00 67.93 O
ATOM 27 OP2 U B 543 -6.017 118.207 82.239 1.00 68.63 O
ATOM 28 O5' U B 543 -3.548 117.907 82.519 1.00 64.41 O
TER
Atoms:
OP1: (3.962,123.706,74.010)
OP2: (2.304,122.464,72.519)
C3': (0.479,123.140,77.474)
C1': (2.095,123.520,79.141)
C5': (1.853,124.484,75.699)
O6: (0.526,127.543,83.298)
O4': (2.642,123.940,77.904)
C8: (1.808,126.015,79.500)
C2: (0.561,123.996,83.162)
C6: (0.669,126.416,82.809)
C5: (1.106,126.063,81.507)
C4: (1.241,124.729,81.189)
P: (2.663,123.655,73.323)
C4': (1.820,123.451,76.810)
C2': (0.924,122.595,78.825)
O2': (1.419,121.273,78.749)
N1: (0.406,125.292,83.579)
N2: (0.250,123.047,84.060)
N3: (0.989,123.652,81.957)
N7: (1.457,126.863,80.429)
N9: (1.720,124.706,79.904)
O5': (1.536,123.877,74.428)
O3': (-0.323,122.188,76.774)
OP2: (2.304,122.464,72.519)
C3': (0.479,123.140,77.474)
C1': (2.095,123.520,79.141)
C5': (1.853,124.484,75.699)
O6: (0.526,127.543,83.298)
O4': (2.642,123.940,77.904)
C8: (1.808,126.015,79.500)
C2: (0.561,123.996,83.162)
C6: (0.669,126.416,82.809)
C5: (1.106,126.063,81.507)
C4: (1.241,124.729,81.189)
P: (2.663,123.655,73.323)
C4': (1.820,123.451,76.810)
C2': (0.924,122.595,78.825)
O2': (1.419,121.273,78.749)
N1: (0.406,125.292,83.579)
N2: (0.250,123.047,84.060)
N3: (0.989,123.652,81.957)
N7: (1.457,126.863,80.429)
N9: (1.720,124.706,79.904)
O5': (1.536,123.877,74.428)
O3': (-0.323,122.188,76.774)
OP1: (-2.429,120.910,76.382)
OP2: (-2.481,123.470,76.577)
C3': (-3.979,120.883,80.686)
C1': (-3.114,122.668,81.944)
C5': (-1.803,120.829,79.295)
O6: (-2.507,128.488,83.249)
O4': (-1.995,121.954,81.461)
C8: (-2.285,124.856,80.989)
C2: (-3.591,125.635,85.076)
C6: (-2.770,127.295,83.475)
C5: (-2.642,126.184,82.608)
C4: (-3.009,124.938,83.059)
P: (-1.925,122.165,77.003)
C4': (-2.454,120.815,80.667)
C2': (-4.234,122.359,80.957)
O2': (-5.489,122.631,81.539)
N1: (-3.262,126.917,84.717)
N2: (-4.038,125.473,86.329)
N3: (-3.487,124.590,84.269)
N7: (-2.180,126.117,81.305)
N9: (-2.801,124.090,81.997)
O5': (-2.124,122.052,78.583)
O3': (-4.471,120.126,81.787)
OP2: (-2.481,123.470,76.577)
C3': (-3.979,120.883,80.686)
C1': (-3.114,122.668,81.944)
C5': (-1.803,120.829,79.295)
O6: (-2.507,128.488,83.249)
O4': (-1.995,121.954,81.461)
C8: (-2.285,124.856,80.989)
C2: (-3.591,125.635,85.076)
C6: (-2.770,127.295,83.475)
C5: (-2.642,126.184,82.608)
C4: (-3.009,124.938,83.059)
P: (-1.925,122.165,77.003)
C4': (-2.454,120.815,80.667)
C2': (-4.234,122.359,80.957)
O2': (-5.489,122.631,81.539)
N1: (-3.262,126.917,84.717)
N2: (-4.038,125.473,86.329)
N3: (-3.487,124.590,84.269)
N7: (-2.180,126.117,81.305)
N9: (-2.801,124.090,81.997)
O5': (-2.124,122.052,78.583)
O3': (-4.471,120.126,81.787)
Image (generated by PyMOL):