Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1U8D:A46:A47
Extra
PDB:
ATOM 1 O3' C A 45 44.971 7.328 6.520 1.00 15.95 O
ATOM 2 P C A 46 46.349 7.925 7.060 1.00 17.42 P
ATOM 3 OP1 C A 46 47.356 7.713 5.977 1.00 20.07 O
ATOM 4 OP2 C A 46 46.636 7.464 8.434 1.00 19.05 O
ATOM 5 O5' C A 46 46.133 9.494 7.201 1.00 17.65 O
ATOM 6 C5' C A 46 45.764 10.291 6.081 1.00 17.42 C
ATOM 7 C4' C A 46 45.277 11.640 6.565 1.00 16.64 C
ATOM 8 O4' C A 46 44.139 11.438 7.426 1.00 14.79 O
ATOM 9 C3' C A 46 46.263 12.391 7.446 1.00 17.63 C
ATOM 10 O3' C A 46 47.139 13.091 6.584 1.00 20.87 O
ATOM 11 C2' C A 46 45.331 13.335 8.203 1.00 16.43 C
ATOM 12 O2' C A 46 44.852 14.369 7.365 1.00 14.86 O
ATOM 13 C1' C A 46 44.138 12.417 8.454 1.00 13.94 C
ATOM 14 N1 C A 46 44.153 11.729 9.750 1.00 13.10 N
ATOM 15 C2 C A 46 43.580 12.368 10.847 1.00 12.09 C
ATOM 16 O2 C A 46 43.175 13.525 10.710 1.00 13.24 O
ATOM 17 N3 C A 46 43.489 11.711 12.021 1.00 11.67 N
ATOM 18 C4 C A 46 43.975 10.468 12.138 1.00 12.40 C
ATOM 19 N4 C A 46 43.831 9.835 13.322 1.00 12.14 N
ATOM 20 C5 C A 46 44.626 9.812 11.054 1.00 12.01 C
ATOM 21 C6 C A 46 44.688 10.474 9.885 1.00 12.81 C
ATOM 22 P G A 47 48.728 12.846 6.660 1.00 24.16 P
ATOM 23 OP1 G A 47 49.270 13.445 5.410 1.00 23.67 O
ATOM 24 OP2 G A 47 48.943 11.426 6.942 1.00 23.26 O
ATOM 25 O5' G A 47 49.205 13.690 7.911 1.00 26.62 O
TER
ATOM 1 O3' C B 46 47.139 13.091 6.584 1.00 20.87 O
ATOM 2 P G B 47 48.728 12.846 6.660 1.00 24.16 P
ATOM 3 OP1 G B 47 49.270 13.445 5.410 1.00 23.67 O
ATOM 4 OP2 G B 47 48.943 11.426 6.942 1.00 23.26 O
ATOM 5 O5' G B 47 49.205 13.690 7.911 1.00 26.62 O
ATOM 6 C5' G B 47 50.589 13.855 8.182 1.00 30.96 C
ATOM 7 C4' G B 47 50.774 14.353 9.582 1.00 33.50 C
ATOM 8 O4' G B 47 50.528 13.270 10.506 1.00 33.47 O
ATOM 9 C3' G B 47 52.218 14.771 9.809 1.00 34.85 C
ATOM 10 O3' G B 47 52.203 15.955 10.570 1.00 37.99 O
ATOM 11 C2' G B 47 52.906 13.588 10.482 1.00 34.23 C
ATOM 12 O2' G B 47 53.808 13.966 11.496 1.00 36.44 O
ATOM 13 C1' G B 47 51.721 12.929 11.174 1.00 33.41 C
ATOM 14 N9 G B 47 51.722 11.510 11.492 1.00 31.26 N
ATOM 15 C8 G B 47 52.117 10.448 10.718 1.00 31.91 C
ATOM 16 N7 G B 47 51.933 9.296 11.308 1.00 31.27 N
ATOM 17 C5 G B 47 51.407 9.628 12.552 1.00 30.56 C
ATOM 18 C6 G B 47 50.995 8.807 13.633 1.00 31.34 C
ATOM 19 O6 G B 47 51.018 7.569 13.717 1.00 32.16 O
ATOM 20 N1 G B 47 50.498 9.572 14.697 1.00 30.15 N
ATOM 21 C2 G B 47 50.401 10.940 14.706 1.00 26.83 C
ATOM 22 N2 G B 47 49.859 11.501 15.789 1.00 25.94 N
ATOM 23 N3 G B 47 50.792 11.704 13.717 1.00 28.92 N
ATOM 24 C4 G B 47 51.277 10.988 12.677 1.00 30.49 C
ATOM 25 P U B 48 52.954 17.235 10.045 1.00 41.73 P
ATOM 26 OP1 U B 48 53.058 17.081 8.559 1.00 41.63 O
ATOM 27 OP2 U B 48 54.175 17.334 10.869 1.00 43.38 O
ATOM 28 O5' U B 48 51.997 18.439 10.460 1.00 39.87 O
TER
ATOM 2 P C A 46 46.349 7.925 7.060 1.00 17.42 P
ATOM 3 OP1 C A 46 47.356 7.713 5.977 1.00 20.07 O
ATOM 4 OP2 C A 46 46.636 7.464 8.434 1.00 19.05 O
ATOM 5 O5' C A 46 46.133 9.494 7.201 1.00 17.65 O
ATOM 6 C5' C A 46 45.764 10.291 6.081 1.00 17.42 C
ATOM 7 C4' C A 46 45.277 11.640 6.565 1.00 16.64 C
ATOM 8 O4' C A 46 44.139 11.438 7.426 1.00 14.79 O
ATOM 9 C3' C A 46 46.263 12.391 7.446 1.00 17.63 C
ATOM 10 O3' C A 46 47.139 13.091 6.584 1.00 20.87 O
ATOM 11 C2' C A 46 45.331 13.335 8.203 1.00 16.43 C
ATOM 12 O2' C A 46 44.852 14.369 7.365 1.00 14.86 O
ATOM 13 C1' C A 46 44.138 12.417 8.454 1.00 13.94 C
ATOM 14 N1 C A 46 44.153 11.729 9.750 1.00 13.10 N
ATOM 15 C2 C A 46 43.580 12.368 10.847 1.00 12.09 C
ATOM 16 O2 C A 46 43.175 13.525 10.710 1.00 13.24 O
ATOM 17 N3 C A 46 43.489 11.711 12.021 1.00 11.67 N
ATOM 18 C4 C A 46 43.975 10.468 12.138 1.00 12.40 C
ATOM 19 N4 C A 46 43.831 9.835 13.322 1.00 12.14 N
ATOM 20 C5 C A 46 44.626 9.812 11.054 1.00 12.01 C
ATOM 21 C6 C A 46 44.688 10.474 9.885 1.00 12.81 C
ATOM 22 P G A 47 48.728 12.846 6.660 1.00 24.16 P
ATOM 23 OP1 G A 47 49.270 13.445 5.410 1.00 23.67 O
ATOM 24 OP2 G A 47 48.943 11.426 6.942 1.00 23.26 O
ATOM 25 O5' G A 47 49.205 13.690 7.911 1.00 26.62 O
TER
ATOM 1 O3' C B 46 47.139 13.091 6.584 1.00 20.87 O
ATOM 2 P G B 47 48.728 12.846 6.660 1.00 24.16 P
ATOM 3 OP1 G B 47 49.270 13.445 5.410 1.00 23.67 O
ATOM 4 OP2 G B 47 48.943 11.426 6.942 1.00 23.26 O
ATOM 5 O5' G B 47 49.205 13.690 7.911 1.00 26.62 O
ATOM 6 C5' G B 47 50.589 13.855 8.182 1.00 30.96 C
ATOM 7 C4' G B 47 50.774 14.353 9.582 1.00 33.50 C
ATOM 8 O4' G B 47 50.528 13.270 10.506 1.00 33.47 O
ATOM 9 C3' G B 47 52.218 14.771 9.809 1.00 34.85 C
ATOM 10 O3' G B 47 52.203 15.955 10.570 1.00 37.99 O
ATOM 11 C2' G B 47 52.906 13.588 10.482 1.00 34.23 C
ATOM 12 O2' G B 47 53.808 13.966 11.496 1.00 36.44 O
ATOM 13 C1' G B 47 51.721 12.929 11.174 1.00 33.41 C
ATOM 14 N9 G B 47 51.722 11.510 11.492 1.00 31.26 N
ATOM 15 C8 G B 47 52.117 10.448 10.718 1.00 31.91 C
ATOM 16 N7 G B 47 51.933 9.296 11.308 1.00 31.27 N
ATOM 17 C5 G B 47 51.407 9.628 12.552 1.00 30.56 C
ATOM 18 C6 G B 47 50.995 8.807 13.633 1.00 31.34 C
ATOM 19 O6 G B 47 51.018 7.569 13.717 1.00 32.16 O
ATOM 20 N1 G B 47 50.498 9.572 14.697 1.00 30.15 N
ATOM 21 C2 G B 47 50.401 10.940 14.706 1.00 26.83 C
ATOM 22 N2 G B 47 49.859 11.501 15.789 1.00 25.94 N
ATOM 23 N3 G B 47 50.792 11.704 13.717 1.00 28.92 N
ATOM 24 C4 G B 47 51.277 10.988 12.677 1.00 30.49 C
ATOM 25 P U B 48 52.954 17.235 10.045 1.00 41.73 P
ATOM 26 OP1 U B 48 53.058 17.081 8.559 1.00 41.63 O
ATOM 27 OP2 U B 48 54.175 17.334 10.869 1.00 43.38 O
ATOM 28 O5' U B 48 51.997 18.439 10.460 1.00 39.87 O
TER
Atoms:
C2: (43.580,12.368,10.847)
OP1: (47.356,7.713,5.977)
OP2: (46.636,7.464,8.434)
C4: (43.975,10.468,12.138)
O5': (46.133,9.494,7.201)
C3': (46.263,12.391,7.446)
C1': (44.138,12.417,8.454)
O4': (44.139,11.438,7.426)
C5': (45.764,10.291,6.081)
P: (46.349,7.925,7.060)
O2: (43.175,13.525,10.710)
C4': (45.277,11.640,6.565)
C2': (45.331,13.335,8.203)
O2': (44.852,14.369,7.365)
N1: (44.153,11.729,9.750)
N3: (43.489,11.711,12.021)
N4: (43.831,9.835,13.322)
C6: (44.688,10.474,9.885)
C5: (44.626,9.812,11.054)
O3': (47.139,13.091,6.584)
OP1: (47.356,7.713,5.977)
OP2: (46.636,7.464,8.434)
C4: (43.975,10.468,12.138)
O5': (46.133,9.494,7.201)
C3': (46.263,12.391,7.446)
C1': (44.138,12.417,8.454)
O4': (44.139,11.438,7.426)
C5': (45.764,10.291,6.081)
P: (46.349,7.925,7.060)
O2: (43.175,13.525,10.710)
C4': (45.277,11.640,6.565)
C2': (45.331,13.335,8.203)
O2': (44.852,14.369,7.365)
N1: (44.153,11.729,9.750)
N3: (43.489,11.711,12.021)
N4: (43.831,9.835,13.322)
C6: (44.688,10.474,9.885)
C5: (44.626,9.812,11.054)
O3': (47.139,13.091,6.584)
OP1: (49.270,13.445,5.410)
OP2: (48.943,11.426,6.942)
C3': (52.218,14.771,9.809)
C1': (51.721,12.929,11.174)
C5': (50.589,13.855,8.182)
O6: (51.018,7.569,13.717)
O4': (50.528,13.270,10.506)
C8: (52.117,10.448,10.718)
C2: (50.401,10.940,14.706)
C6: (50.995,8.807,13.633)
C5: (51.407,9.628,12.552)
C4: (51.277,10.988,12.677)
P: (48.728,12.846,6.660)
C4': (50.774,14.353,9.582)
C2': (52.906,13.588,10.482)
O2': (53.808,13.966,11.496)
N1: (50.498,9.572,14.697)
N2: (49.859,11.501,15.789)
N3: (50.792,11.704,13.717)
N7: (51.933,9.296,11.308)
N9: (51.722,11.510,11.492)
O5': (49.205,13.690,7.911)
O3': (52.203,15.955,10.570)
OP2: (48.943,11.426,6.942)
C3': (52.218,14.771,9.809)
C1': (51.721,12.929,11.174)
C5': (50.589,13.855,8.182)
O6: (51.018,7.569,13.717)
O4': (50.528,13.270,10.506)
C8: (52.117,10.448,10.718)
C2: (50.401,10.940,14.706)
C6: (50.995,8.807,13.633)
C5: (51.407,9.628,12.552)
C4: (51.277,10.988,12.677)
P: (48.728,12.846,6.660)
C4': (50.774,14.353,9.582)
C2': (52.906,13.588,10.482)
O2': (53.808,13.966,11.496)
N1: (50.498,9.572,14.697)
N2: (49.859,11.501,15.789)
N3: (50.792,11.704,13.717)
N7: (51.933,9.296,11.308)
N9: (51.722,11.510,11.492)
O5': (49.205,13.690,7.911)
O3': (52.203,15.955,10.570)
Image (generated by PyMOL):