ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1U9S:A60:A61

Extra

PDB:
ATOM 1 O3' C A 59 64.614 -16.759 120.027 1.00 68.75 O
ATOM 2 P C A 60 65.986 -17.074 120.793 1.00 71.97 P
ATOM 3 OP1 C A 60 67.098 -16.432 120.045 1.00 66.55 O
ATOM 4 OP2 C A 60 66.022 -18.544 121.070 1.00 65.06 O
ATOM 5 O5' C A 60 65.791 -16.303 122.165 1.00 60.10 O
ATOM 6 C5' C A 60 66.755 -16.377 123.190 1.00 58.56 C
ATOM 7 C4' C A 60 66.242 -15.644 124.397 1.00 58.13 C
ATOM 8 O4' C A 60 64.851 -15.986 124.598 1.00 57.56 O
ATOM 9 C3' C A 60 66.923 -16.001 125.699 1.00 59.42 C
ATOM 10 O3' C A 60 68.058 -15.185 125.855 1.00 56.74 O
ATOM 11 C2' C A 60 65.861 -15.657 126.721 1.00 55.96 C
ATOM 12 O2' C A 60 65.851 -14.259 126.910 1.00 60.48 O
ATOM 13 C1' C A 60 64.587 -16.077 125.987 1.00 55.24 C
ATOM 14 N1 C A 60 64.070 -17.432 126.260 1.00 55.10 N
ATOM 15 C2 C A 60 63.875 -17.851 127.582 1.00 55.86 C
ATOM 16 O2 C A 60 64.194 -17.100 128.505 1.00 51.33 O
ATOM 17 N3 C A 60 63.341 -19.074 127.817 1.00 59.05 N
ATOM 18 C4 C A 60 63.019 -19.870 126.793 1.00 65.63 C
ATOM 19 N4 C A 60 62.491 -21.071 127.070 1.00 67.45 N
ATOM 20 C5 C A 60 63.223 -19.474 125.439 1.00 63.98 C
ATOM 21 C6 C A 60 63.750 -18.263 125.222 1.00 59.94 C
ATOM 22 P A A 61 69.500 -15.794 125.543 1.00 66.05 P
ATOM 23 OP1 A A 61 70.375 -14.677 125.097 1.00 69.35 O
ATOM 24 OP2 A A 61 69.257 -16.941 124.618 1.00 52.87 O
ATOM 25 O5' A A 61 70.028 -16.345 126.952 1.00 62.16 O
TER

ATOM 1 O3' C B 60 68.058 -15.185 125.855 1.00 56.74 O
ATOM 2 P A B 61 69.500 -15.794 125.543 1.00 66.05 P
ATOM 3 OP1 A B 61 70.375 -14.677 125.097 1.00 69.35 O
ATOM 4 OP2 A B 61 69.257 -16.941 124.618 1.00 52.87 O
ATOM 5 O5' A B 61 70.028 -16.345 126.952 1.00 62.16 O
ATOM 6 C5' A B 61 70.359 -15.475 128.044 1.00 72.02 C
ATOM 7 C4' A B 61 70.798 -16.300 129.245 1.00 84.25 C
ATOM 8 O4' A B 61 69.934 -17.461 129.312 1.00 92.72 O
ATOM 9 C3' A B 61 72.216 -16.865 129.223 1.00 88.87 C
ATOM 10 O3' A B 61 73.126 -16.064 129.993 1.00 90.94 O
ATOM 11 C2' A B 61 72.078 -18.122 130.081 1.00 93.97 C
ATOM 12 O2' A B 61 72.146 -17.884 131.473 1.00103.98 O
ATOM 13 C1' A B 61 70.668 -18.590 129.744 1.00 90.83 C
ATOM 14 N9 A B 61 70.589 -19.582 128.689 1.00 86.26 N
ATOM 15 C8 A B 61 71.075 -19.508 127.409 1.00 87.90 C
ATOM 16 N7 A B 61 70.743 -20.530 126.663 1.00 89.92 N
ATOM 17 C5 A B 61 70.014 -21.340 127.521 1.00 86.90 C
ATOM 18 C6 A B 61 69.372 -22.567 127.334 1.00 89.04 C
ATOM 19 N6 A B 61 69.372 -23.225 126.173 1.00 90.25 N
ATOM 20 N1 A B 61 68.722 -23.105 128.393 1.00 88.24 N
ATOM 21 C2 A B 61 68.738 -22.439 129.559 1.00 85.92 C
ATOM 22 N3 A B 61 69.314 -21.275 129.856 1.00 78.74 N
ATOM 23 C4 A B 61 69.935 -20.775 128.779 1.00 82.13 C
ATOM 24 P G B 62 73.245 -14.479 129.763 1.00 88.83 P
ATOM 25 OP1 G B 62 72.635 -14.131 128.460 1.00 92.34 O
ATOM 26 OP2 G B 62 74.670 -14.148 130.017 1.00 86.19 O
ATOM 27 O5' G B 62 72.381 -13.815 130.936 1.00 86.78 O
TER

Atoms:
C2: (63.875,-17.851,127.582)
OP1: (67.098,-16.432,120.045)
OP2: (66.022,-18.544,121.070)
C4: (63.019,-19.870,126.793)
O5': (65.791,-16.303,122.165)
C3': (66.923,-16.001,125.699)
C1': (64.587,-16.077,125.987)
O4': (64.851,-15.986,124.598)
C5': (66.755,-16.377,123.190)
P: (65.986,-17.074,120.793)
O2: (64.194,-17.100,128.505)
C4': (66.242,-15.644,124.397)
C2': (65.861,-15.657,126.721)
O2': (65.851,-14.259,126.910)
N1: (64.070,-17.432,126.260)
N3: (63.341,-19.074,127.817)
N4: (62.491,-21.071,127.070)
C6: (63.750,-18.263,125.222)
C5: (63.223,-19.474,125.439)
O3': (68.058,-15.185,125.855)
OP1: (70.375,-14.677,125.097)
OP2: (69.257,-16.941,124.618)
C3': (72.216,-16.865,129.223)
C1': (70.668,-18.590,129.744)
C5': (70.359,-15.475,128.044)
O4': (69.934,-17.461,129.312)
C8: (71.075,-19.508,127.409)
O2': (72.146,-17.884,131.473)
C6: (69.372,-22.567,127.334)
C5: (70.014,-21.340,127.521)
C4: (69.935,-20.775,128.779)
P: (69.500,-15.794,125.543)
C4': (70.798,-16.300,129.245)
C2': (72.078,-18.122,130.081)
C2: (68.738,-22.439,129.559)
N1: (68.722,-23.105,128.393)
N3: (69.314,-21.275,129.856)
N6: (69.372,-23.225,126.173)
N7: (70.743,-20.530,126.663)
N9: (70.589,-19.582,128.689)
O5': (70.028,-16.345,126.952)
O3': (73.126,-16.064,129.993)
Image (generated by PyMOL):
PyMOL image
show in jmol