ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2B57:A45:A46

Extra

PDB:
ATOM 1 O3' C A 44 -44.433 -8.810 5.776 1.00 28.99 O
ATOM 2 P C A 45 -45.956 -9.134 6.164 1.00 27.46 P
ATOM 3 OP1 C A 45 -46.771 -8.756 4.978 1.00 28.66 O
ATOM 4 OP2 C A 45 -46.268 -8.552 7.493 1.00 27.20 O
ATOM 5 O5' C A 45 -45.991 -10.717 6.307 1.00 28.56 O
ATOM 6 C5' C A 45 -45.579 -11.539 5.224 1.00 30.13 C
ATOM 7 C4' C A 45 -45.114 -12.880 5.735 1.00 30.26 C
ATOM 8 O4' C A 45 -44.016 -12.696 6.667 1.00 29.86 O
ATOM 9 C3' C A 45 -46.143 -13.654 6.535 1.00 30.27 C
ATOM 10 O3' C A 45 -46.999 -14.355 5.651 1.00 32.55 O
ATOM 11 C2' C A 45 -45.258 -14.603 7.328 1.00 29.65 C
ATOM 12 O2' C A 45 -44.771 -15.658 6.527 1.00 28.32 O
ATOM 13 C1' C A 45 -44.079 -13.694 7.668 1.00 30.39 C
ATOM 14 N1 C A 45 -44.169 -13.037 8.980 1.00 32.57 N
ATOM 15 C2 C A 45 -43.772 -13.752 10.111 1.00 34.07 C
ATOM 16 O2 C A 45 -43.420 -14.937 9.978 1.00 37.22 O
ATOM 17 N3 C A 45 -43.780 -13.141 11.316 1.00 33.35 N
ATOM 18 C4 C A 45 -44.176 -11.872 11.417 1.00 33.70 C
ATOM 19 N4 C A 45 -44.131 -11.302 12.619 1.00 32.37 N
ATOM 20 C5 C A 45 -44.628 -11.130 10.287 1.00 33.44 C
ATOM 21 C6 C A 45 -44.607 -11.747 9.097 1.00 33.90 C
ATOM 22 P G A 46 -48.561 -13.993 5.593 1.00 34.52 P
ATOM 23 OP1 G A 46 -49.149 -14.762 4.467 1.00 37.20 O
ATOM 24 OP2 G A 46 -48.690 -12.514 5.613 1.00 35.97 O
ATOM 25 O5' G A 46 -49.154 -14.585 6.946 1.00 36.95 O
TER

ATOM 1 O3' C B 45 -46.999 -14.355 5.651 1.00 32.55 O
ATOM 2 P G B 46 -48.561 -13.993 5.593 1.00 34.52 P
ATOM 3 OP1 G B 46 -49.149 -14.762 4.467 1.00 37.20 O
ATOM 4 OP2 G B 46 -48.690 -12.514 5.613 1.00 35.97 O
ATOM 5 O5' G B 46 -49.154 -14.585 6.946 1.00 36.95 O
ATOM 6 C5' G B 46 -50.549 -14.870 7.066 1.00 42.05 C
ATOM 7 C4' G B 46 -50.846 -15.484 8.417 1.00 45.87 C
ATOM 8 O4' G B 46 -50.606 -14.498 9.454 1.00 46.06 O
ATOM 9 C3' G B 46 -52.318 -15.868 8.543 1.00 47.25 C
ATOM 10 O3' G B 46 -52.473 -17.137 9.154 1.00 49.36 O
ATOM 11 C2' G B 46 -52.998 -14.725 9.291 1.00 46.59 C
ATOM 12 O2' G B 46 -53.892 -15.215 10.265 1.00 49.57 O
ATOM 13 C1' G B 46 -51.825 -14.134 10.060 1.00 46.36 C
ATOM 14 N9 G B 46 -51.806 -12.718 10.386 1.00 45.43 N
ATOM 15 C8 G B 46 -52.152 -11.641 9.610 1.00 44.53 C
ATOM 16 N7 G B 46 -51.981 -10.501 10.223 1.00 45.50 N
ATOM 17 C5 G B 46 -51.501 -10.857 11.478 1.00 45.70 C
ATOM 18 C6 G B 46 -51.114 -10.055 12.586 1.00 45.83 C
ATOM 19 O6 G B 46 -51.115 -8.823 12.686 1.00 45.81 O
ATOM 20 N1 G B 46 -50.681 -10.838 13.656 1.00 45.84 N
ATOM 21 C2 G B 46 -50.619 -12.211 13.657 1.00 44.83 C
ATOM 22 N2 G B 46 -50.168 -12.796 14.777 1.00 44.62 N
ATOM 23 N3 G B 46 -50.973 -12.960 12.633 1.00 45.59 N
ATOM 24 C4 G B 46 -51.399 -12.222 11.588 1.00 44.96 C
ATOM 25 P U B 47 -52.966 -18.391 8.300 1.00 53.05 P
ATOM 26 OP1 U B 47 -52.497 -18.242 6.895 1.00 55.08 O
ATOM 27 OP2 U B 47 -54.411 -18.574 8.577 1.00 54.76 O
ATOM 28 O5' U B 47 -52.183 -19.602 8.975 1.00 52.50 O
TER

Atoms:
C2: (-43.772,-13.752,10.111)
OP1: (-46.771,-8.756,4.978)
OP2: (-46.268,-8.552,7.493)
C4: (-44.176,-11.872,11.417)
O5': (-45.991,-10.717,6.307)
C3': (-46.143,-13.654,6.535)
C1': (-44.079,-13.694,7.668)
O4': (-44.016,-12.696,6.667)
C5': (-45.579,-11.539,5.224)
P: (-45.956,-9.134,6.164)
O2: (-43.420,-14.937,9.978)
C4': (-45.114,-12.880,5.735)
C2': (-45.258,-14.603,7.328)
O2': (-44.771,-15.658,6.527)
N1: (-44.169,-13.037,8.980)
N3: (-43.780,-13.141,11.316)
N4: (-44.131,-11.302,12.619)
C6: (-44.607,-11.747,9.097)
C5: (-44.628,-11.130,10.287)
O3': (-46.999,-14.355,5.651)
OP1: (-49.149,-14.762,4.467)
OP2: (-48.690,-12.514,5.613)
C3': (-52.318,-15.868,8.543)
C1': (-51.825,-14.134,10.060)
C5': (-50.549,-14.870,7.066)
O6: (-51.115,-8.823,12.686)
O4': (-50.606,-14.498,9.454)
C8: (-52.152,-11.641,9.610)
C2: (-50.619,-12.211,13.657)
C6: (-51.114,-10.055,12.586)
C5: (-51.501,-10.857,11.478)
C4: (-51.399,-12.222,11.588)
P: (-48.561,-13.993,5.593)
C4': (-50.846,-15.484,8.417)
C2': (-52.998,-14.725,9.291)
O2': (-53.892,-15.215,10.265)
N1: (-50.681,-10.838,13.656)
N2: (-50.168,-12.796,14.777)
N3: (-50.973,-12.960,12.633)
N7: (-51.981,-10.501,10.223)
N9: (-51.806,-12.718,10.386)
O5': (-49.154,-14.585,6.946)
O3': (-52.473,-17.137,9.154)
Image (generated by PyMOL):
PyMOL image
show in jmol