Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XD0:U7:U8
Extra
PDB:
ATOM 1 O3' G A 6 7.214 -25.637 1.616 1.00129.30 O
ATOM 2 P U A 7 6.394 -26.166 2.897 1.00127.17 P
ATOM 3 OP1 U A 7 7.071 -27.411 3.348 1.00127.27 O
ATOM 4 OP2 U A 7 4.968 -26.212 2.480 1.00126.58 O
ATOM 5 O5' U A 7 6.624 -25.011 3.971 1.00122.55 O
ATOM 6 C5' U A 7 7.865 -24.921 4.656 1.00122.21 C
ATOM 7 C4' U A 7 7.893 -23.806 5.677 1.00121.09 C
ATOM 8 O4' U A 7 7.621 -22.528 5.041 1.00122.45 O
ATOM 9 C3' U A 7 6.880 -23.865 6.815 1.00118.50 C
ATOM 10 O3' U A 7 7.219 -24.745 7.871 1.00118.22 O
ATOM 11 C2' U A 7 6.817 -22.420 7.287 1.00118.31 C
ATOM 12 O2' U A 7 7.907 -22.134 8.165 1.00117.82 O
ATOM 13 C1' U A 7 6.971 -21.672 5.960 1.00120.48 C
ATOM 14 N1 U A 7 5.671 -21.278 5.386 1.00120.88 N
ATOM 15 C2 U A 7 5.017 -20.233 5.992 1.00119.31 C
ATOM 16 O2 U A 7 5.469 -19.660 6.964 1.00117.41 O
ATOM 17 N3 U A 7 3.819 -19.889 5.434 1.00120.26 N
ATOM 18 C4 U A 7 3.228 -20.482 4.348 1.00123.29 C
ATOM 19 O4 U A 7 2.142 -20.060 3.956 1.00125.24 O
ATOM 20 C5 U A 7 3.970 -21.561 3.774 1.00124.14 C
ATOM 21 C6 U A 7 5.142 -21.916 4.297 1.00122.96 C
ATOM 22 P G A 8 5.952 -25.316 8.666 1.00121.96 P
ATOM 23 OP1 G A 8 6.498 -26.258 9.676 1.00119.25 O
ATOM 24 OP2 G A 8 5.030 -25.786 7.586 1.00116.81 O
ATOM 25 O5' G A 8 5.330 -24.035 9.376 1.00116.30 O
TER
ATOM 1 O3' U B 7 7.219 -24.745 7.871 1.00118.22 O
ATOM 2 P G B 8 5.952 -25.316 8.666 1.00121.96 P
ATOM 3 OP1 G B 8 6.498 -26.258 9.676 1.00119.25 O
ATOM 4 OP2 G B 8 5.030 -25.786 7.586 1.00116.81 O
ATOM 5 O5' G B 8 5.330 -24.035 9.376 1.00116.30 O
ATOM 6 C5' G B 8 5.792 -23.552 10.627 1.00115.30 C
ATOM 7 C4' G B 8 4.806 -23.894 11.723 1.00116.68 C
ATOM 8 O4' G B 8 3.452 -23.821 11.210 1.00118.44 O
ATOM 9 C3' G B 8 4.945 -25.284 12.341 1.00118.26 C
ATOM 10 O3' G B 8 5.762 -25.244 13.502 1.00118.07 O
ATOM 11 C2' G B 8 3.524 -25.745 12.654 1.00120.83 C
ATOM 12 O2' G B 8 3.251 -25.624 14.046 1.00121.81 O
ATOM 13 C1' G B 8 2.645 -24.808 11.811 1.00121.18 C
ATOM 14 N9 G B 8 1.935 -25.454 10.707 1.00124.33 N
ATOM 15 C8 G B 8 2.021 -26.735 10.241 1.00125.74 C
ATOM 16 N7 G B 8 1.234 -26.927 9.215 1.00129.03 N
ATOM 17 C5 G B 8 0.610 -25.702 9.002 1.00129.68 C
ATOM 18 C6 G B 8 -0.346 -25.299 8.033 1.00133.02 C
ATOM 19 O6 G B 8 -0.854 -25.980 7.128 1.00136.51 O
ATOM 20 N1 G B 8 -0.696 -23.956 8.198 1.00131.96 N
ATOM 21 C2 G B 8 -0.198 -23.115 9.166 1.00128.33 C
ATOM 22 N2 G B 8 -0.659 -21.856 9.168 1.00127.51 N
ATOM 23 N3 G B 8 0.695 -23.483 10.067 1.00125.66 N
ATOM 24 C4 G B 8 1.043 -24.779 9.921 1.00126.58 C
ATOM 25 P A B 9 6.719 -26.469 13.885 1.00117.16 P
ATOM 26 OP1 A B 9 8.021 -26.156 13.237 1.00116.39 O
ATOM 27 OP2 A B 9 6.675 -26.609 15.369 1.00117.21 O
ATOM 28 O5' A B 9 5.995 -27.712 13.184 1.00117.68 O
TER
ATOM 2 P U A 7 6.394 -26.166 2.897 1.00127.17 P
ATOM 3 OP1 U A 7 7.071 -27.411 3.348 1.00127.27 O
ATOM 4 OP2 U A 7 4.968 -26.212 2.480 1.00126.58 O
ATOM 5 O5' U A 7 6.624 -25.011 3.971 1.00122.55 O
ATOM 6 C5' U A 7 7.865 -24.921 4.656 1.00122.21 C
ATOM 7 C4' U A 7 7.893 -23.806 5.677 1.00121.09 C
ATOM 8 O4' U A 7 7.621 -22.528 5.041 1.00122.45 O
ATOM 9 C3' U A 7 6.880 -23.865 6.815 1.00118.50 C
ATOM 10 O3' U A 7 7.219 -24.745 7.871 1.00118.22 O
ATOM 11 C2' U A 7 6.817 -22.420 7.287 1.00118.31 C
ATOM 12 O2' U A 7 7.907 -22.134 8.165 1.00117.82 O
ATOM 13 C1' U A 7 6.971 -21.672 5.960 1.00120.48 C
ATOM 14 N1 U A 7 5.671 -21.278 5.386 1.00120.88 N
ATOM 15 C2 U A 7 5.017 -20.233 5.992 1.00119.31 C
ATOM 16 O2 U A 7 5.469 -19.660 6.964 1.00117.41 O
ATOM 17 N3 U A 7 3.819 -19.889 5.434 1.00120.26 N
ATOM 18 C4 U A 7 3.228 -20.482 4.348 1.00123.29 C
ATOM 19 O4 U A 7 2.142 -20.060 3.956 1.00125.24 O
ATOM 20 C5 U A 7 3.970 -21.561 3.774 1.00124.14 C
ATOM 21 C6 U A 7 5.142 -21.916 4.297 1.00122.96 C
ATOM 22 P G A 8 5.952 -25.316 8.666 1.00121.96 P
ATOM 23 OP1 G A 8 6.498 -26.258 9.676 1.00119.25 O
ATOM 24 OP2 G A 8 5.030 -25.786 7.586 1.00116.81 O
ATOM 25 O5' G A 8 5.330 -24.035 9.376 1.00116.30 O
TER
ATOM 1 O3' U B 7 7.219 -24.745 7.871 1.00118.22 O
ATOM 2 P G B 8 5.952 -25.316 8.666 1.00121.96 P
ATOM 3 OP1 G B 8 6.498 -26.258 9.676 1.00119.25 O
ATOM 4 OP2 G B 8 5.030 -25.786 7.586 1.00116.81 O
ATOM 5 O5' G B 8 5.330 -24.035 9.376 1.00116.30 O
ATOM 6 C5' G B 8 5.792 -23.552 10.627 1.00115.30 C
ATOM 7 C4' G B 8 4.806 -23.894 11.723 1.00116.68 C
ATOM 8 O4' G B 8 3.452 -23.821 11.210 1.00118.44 O
ATOM 9 C3' G B 8 4.945 -25.284 12.341 1.00118.26 C
ATOM 10 O3' G B 8 5.762 -25.244 13.502 1.00118.07 O
ATOM 11 C2' G B 8 3.524 -25.745 12.654 1.00120.83 C
ATOM 12 O2' G B 8 3.251 -25.624 14.046 1.00121.81 O
ATOM 13 C1' G B 8 2.645 -24.808 11.811 1.00121.18 C
ATOM 14 N9 G B 8 1.935 -25.454 10.707 1.00124.33 N
ATOM 15 C8 G B 8 2.021 -26.735 10.241 1.00125.74 C
ATOM 16 N7 G B 8 1.234 -26.927 9.215 1.00129.03 N
ATOM 17 C5 G B 8 0.610 -25.702 9.002 1.00129.68 C
ATOM 18 C6 G B 8 -0.346 -25.299 8.033 1.00133.02 C
ATOM 19 O6 G B 8 -0.854 -25.980 7.128 1.00136.51 O
ATOM 20 N1 G B 8 -0.696 -23.956 8.198 1.00131.96 N
ATOM 21 C2 G B 8 -0.198 -23.115 9.166 1.00128.33 C
ATOM 22 N2 G B 8 -0.659 -21.856 9.168 1.00127.51 N
ATOM 23 N3 G B 8 0.695 -23.483 10.067 1.00125.66 N
ATOM 24 C4 G B 8 1.043 -24.779 9.921 1.00126.58 C
ATOM 25 P A B 9 6.719 -26.469 13.885 1.00117.16 P
ATOM 26 OP1 A B 9 8.021 -26.156 13.237 1.00116.39 O
ATOM 27 OP2 A B 9 6.675 -26.609 15.369 1.00117.21 O
ATOM 28 O5' A B 9 5.995 -27.712 13.184 1.00117.68 O
TER
Atoms:
C4: (3.228,-20.482,4.348)
N3: (3.819,-19.889,5.434)
OP1: (7.071,-27.411,3.348)
OP2: (4.968,-26.212,2.480)
C2: (5.017,-20.233,5.992)
C1': (6.971,-21.672,5.960)
C3': (6.880,-23.865,6.815)
O5': (6.624,-25.011,3.971)
O4': (7.621,-22.528,5.041)
C5': (7.865,-24.921,4.656)
P: (6.394,-26.166,2.897)
C4': (7.893,-23.806,5.677)
C2': (6.817,-22.420,7.287)
O2': (7.907,-22.134,8.165)
N1: (5.671,-21.278,5.386)
O4: (2.142,-20.060,3.956)
O2: (5.469,-19.660,6.964)
C6: (5.142,-21.916,4.297)
C5: (3.970,-21.561,3.774)
O3': (7.219,-24.745,7.871)
N3: (3.819,-19.889,5.434)
OP1: (7.071,-27.411,3.348)
OP2: (4.968,-26.212,2.480)
C2: (5.017,-20.233,5.992)
C1': (6.971,-21.672,5.960)
C3': (6.880,-23.865,6.815)
O5': (6.624,-25.011,3.971)
O4': (7.621,-22.528,5.041)
C5': (7.865,-24.921,4.656)
P: (6.394,-26.166,2.897)
C4': (7.893,-23.806,5.677)
C2': (6.817,-22.420,7.287)
O2': (7.907,-22.134,8.165)
N1: (5.671,-21.278,5.386)
O4: (2.142,-20.060,3.956)
O2: (5.469,-19.660,6.964)
C6: (5.142,-21.916,4.297)
C5: (3.970,-21.561,3.774)
O3': (7.219,-24.745,7.871)
OP1: (6.498,-26.258,9.676)
OP2: (5.030,-25.786,7.586)
C3': (4.945,-25.284,12.341)
C1': (2.645,-24.808,11.811)
C5': (5.792,-23.552,10.627)
O6: (-0.854,-25.980,7.128)
O4': (3.452,-23.821,11.210)
C8: (2.021,-26.735,10.241)
C2: (-0.198,-23.115,9.166)
C6: (-0.346,-25.299,8.033)
C5: (0.610,-25.702,9.002)
C4: (1.043,-24.779,9.921)
P: (5.952,-25.316,8.666)
C4': (4.806,-23.894,11.723)
C2': (3.524,-25.745,12.654)
O2': (3.251,-25.624,14.046)
N1: (-0.696,-23.956,8.198)
N2: (-0.659,-21.856,9.168)
N3: (0.695,-23.483,10.067)
N7: (1.234,-26.927,9.215)
N9: (1.935,-25.454,10.707)
O5': (5.330,-24.035,9.376)
O3': (5.762,-25.244,13.502)
OP2: (5.030,-25.786,7.586)
C3': (4.945,-25.284,12.341)
C1': (2.645,-24.808,11.811)
C5': (5.792,-23.552,10.627)
O6: (-0.854,-25.980,7.128)
O4': (3.452,-23.821,11.210)
C8: (2.021,-26.735,10.241)
C2: (-0.198,-23.115,9.166)
C6: (-0.346,-25.299,8.033)
C5: (0.610,-25.702,9.002)
C4: (1.043,-24.779,9.921)
P: (5.952,-25.316,8.666)
C4': (4.806,-23.894,11.723)
C2': (3.524,-25.745,12.654)
O2': (3.251,-25.624,14.046)
N1: (-0.696,-23.956,8.198)
N2: (-0.659,-21.856,9.168)
N3: (0.695,-23.483,10.067)
N7: (1.234,-26.927,9.215)
N9: (1.935,-25.454,10.707)
O5': (5.330,-24.035,9.376)
O3': (5.762,-25.244,13.502)
Image (generated by PyMOL):