Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DS7:A46:A47
Extra
PDB:
ATOM 1 O3' C A 45 -6.012 5.514 -45.786 1.00 20.40 O
ATOM 2 P C A 46 -6.494 5.918 -47.286 1.00 23.70 P
ATOM 3 OP1 C A 46 -6.337 4.664 -48.011 1.00 25.92 O
ATOM 4 OP2 C A 46 -6.030 7.269 -47.866 1.00 23.60 O
ATOM 5 O5' C A 46 -8.069 6.126 -47.112 1.00 22.13 O
ATOM 6 C5' C A 46 -8.877 5.030 -46.575 1.00 20.28 C
ATOM 7 C4' C A 46 -10.279 5.548 -46.238 1.00 19.10 C
ATOM 8 O4' C A 46 -10.203 6.474 -45.107 1.00 15.36 O
ATOM 9 C3' C A 46 -11.021 6.308 -47.318 1.00 19.45 C
ATOM 10 O3' C A 46 -11.668 5.373 -48.175 1.00 21.41 O
ATOM 11 C2' C A 46 -12.046 7.090 -46.510 1.00 18.32 C
ATOM 12 O2' C A 46 -13.068 6.196 -46.076 1.00 20.46 O
ATOM 13 C1' C A 46 -11.202 7.493 -45.294 1.00 16.42 C
ATOM 14 N1 C A 46 -10.493 8.783 -45.410 1.00 15.10 N
ATOM 15 C2 C A 46 -11.104 9.898 -44.920 1.00 14.58 C
ATOM 16 O2 C A 46 -12.331 9.809 -44.532 1.00 15.70 O
ATOM 17 N3 C A 46 -10.420 11.070 -44.860 1.00 14.93 N
ATOM 18 C4 C A 46 -9.159 11.153 -45.334 1.00 14.44 C
ATOM 19 N4 C A 46 -8.518 12.383 -45.250 1.00 15.67 N
ATOM 20 C5 C A 46 -8.502 10.016 -45.908 1.00 17.95 C
ATOM 21 C6 C A 46 -9.217 8.845 -45.940 1.00 15.62 C
ATOM 22 P G A 47 -11.352 5.388 -49.724 1.00 23.10 P
ATOM 23 OP1 G A 47 -11.818 4.109 -50.269 1.00 25.46 O
ATOM 24 OP2 G A 47 -9.974 5.941 -50.062 1.00 23.16 O
ATOM 25 O5' G A 47 -12.355 6.500 -50.253 1.00 24.80 O
TER
ATOM 1 O3' C B 46 -11.668 5.373 -48.175 1.00 21.41 O
ATOM 2 P G B 47 -11.352 5.388 -49.724 1.00 23.10 P
ATOM 3 OP1 G B 47 -11.818 4.109 -50.269 1.00 25.46 O
ATOM 4 OP2 G B 47 -9.974 5.941 -50.062 1.00 23.16 O
ATOM 5 O5' G B 47 -12.355 6.500 -50.253 1.00 24.80 O
ATOM 6 C5' G B 47 -12.555 6.696 -51.651 1.00 28.71 C
ATOM 7 C4' G B 47 -13.054 8.082 -51.862 1.00 32.86 C
ATOM 8 O4' G B 47 -11.918 8.964 -51.718 1.00 32.66 O
ATOM 9 C3' G B 47 -13.567 8.282 -53.288 1.00 33.68 C
ATOM 10 O3' G B 47 -14.754 9.044 -53.178 1.00 34.96 O
ATOM 11 C2' G B 47 -12.423 8.944 -54.032 1.00 34.11 C
ATOM 12 O2' G B 47 -12.828 9.934 -54.903 1.00 37.98 O
ATOM 13 C1' G B 47 -11.719 9.673 -52.904 1.00 33.47 C
ATOM 14 N9 G B 47 -10.322 10.077 -53.002 1.00 32.96 N
ATOM 15 C8 G B 47 -9.288 9.329 -53.472 1.00 32.50 C
ATOM 16 N7 G B 47 -8.140 9.937 -53.379 1.00 32.39 N
ATOM 17 C5 G B 47 -8.436 11.180 -52.837 1.00 31.68 C
ATOM 18 C6 G B 47 -7.569 12.269 -52.495 1.00 31.45 C
ATOM 19 O6 G B 47 -6.327 12.330 -52.596 1.00 30.28 O
ATOM 20 N1 G B 47 -8.288 13.357 -51.969 1.00 30.06 N
ATOM 21 C2 G B 47 -9.653 13.375 -51.784 1.00 30.62 C
ATOM 22 N2 G B 47 -10.175 14.518 -51.320 1.00 30.83 N
ATOM 23 N3 G B 47 -10.460 12.345 -52.054 1.00 31.17 N
ATOM 24 C4 G B 47 -9.780 11.290 -52.591 1.00 32.08 C
ATOM 25 P U B 48 -16.001 8.797 -54.147 1.00 35.19 P
ATOM 26 OP1 U B 48 -16.094 7.330 -54.370 1.00 37.04 O
ATOM 27 OP2 U B 48 -15.896 9.688 -55.253 1.00 37.46 O
ATOM 28 O5' U B 48 -17.252 9.226 -53.246 1.00 35.91 O
TER
ATOM 2 P C A 46 -6.494 5.918 -47.286 1.00 23.70 P
ATOM 3 OP1 C A 46 -6.337 4.664 -48.011 1.00 25.92 O
ATOM 4 OP2 C A 46 -6.030 7.269 -47.866 1.00 23.60 O
ATOM 5 O5' C A 46 -8.069 6.126 -47.112 1.00 22.13 O
ATOM 6 C5' C A 46 -8.877 5.030 -46.575 1.00 20.28 C
ATOM 7 C4' C A 46 -10.279 5.548 -46.238 1.00 19.10 C
ATOM 8 O4' C A 46 -10.203 6.474 -45.107 1.00 15.36 O
ATOM 9 C3' C A 46 -11.021 6.308 -47.318 1.00 19.45 C
ATOM 10 O3' C A 46 -11.668 5.373 -48.175 1.00 21.41 O
ATOM 11 C2' C A 46 -12.046 7.090 -46.510 1.00 18.32 C
ATOM 12 O2' C A 46 -13.068 6.196 -46.076 1.00 20.46 O
ATOM 13 C1' C A 46 -11.202 7.493 -45.294 1.00 16.42 C
ATOM 14 N1 C A 46 -10.493 8.783 -45.410 1.00 15.10 N
ATOM 15 C2 C A 46 -11.104 9.898 -44.920 1.00 14.58 C
ATOM 16 O2 C A 46 -12.331 9.809 -44.532 1.00 15.70 O
ATOM 17 N3 C A 46 -10.420 11.070 -44.860 1.00 14.93 N
ATOM 18 C4 C A 46 -9.159 11.153 -45.334 1.00 14.44 C
ATOM 19 N4 C A 46 -8.518 12.383 -45.250 1.00 15.67 N
ATOM 20 C5 C A 46 -8.502 10.016 -45.908 1.00 17.95 C
ATOM 21 C6 C A 46 -9.217 8.845 -45.940 1.00 15.62 C
ATOM 22 P G A 47 -11.352 5.388 -49.724 1.00 23.10 P
ATOM 23 OP1 G A 47 -11.818 4.109 -50.269 1.00 25.46 O
ATOM 24 OP2 G A 47 -9.974 5.941 -50.062 1.00 23.16 O
ATOM 25 O5' G A 47 -12.355 6.500 -50.253 1.00 24.80 O
TER
ATOM 1 O3' C B 46 -11.668 5.373 -48.175 1.00 21.41 O
ATOM 2 P G B 47 -11.352 5.388 -49.724 1.00 23.10 P
ATOM 3 OP1 G B 47 -11.818 4.109 -50.269 1.00 25.46 O
ATOM 4 OP2 G B 47 -9.974 5.941 -50.062 1.00 23.16 O
ATOM 5 O5' G B 47 -12.355 6.500 -50.253 1.00 24.80 O
ATOM 6 C5' G B 47 -12.555 6.696 -51.651 1.00 28.71 C
ATOM 7 C4' G B 47 -13.054 8.082 -51.862 1.00 32.86 C
ATOM 8 O4' G B 47 -11.918 8.964 -51.718 1.00 32.66 O
ATOM 9 C3' G B 47 -13.567 8.282 -53.288 1.00 33.68 C
ATOM 10 O3' G B 47 -14.754 9.044 -53.178 1.00 34.96 O
ATOM 11 C2' G B 47 -12.423 8.944 -54.032 1.00 34.11 C
ATOM 12 O2' G B 47 -12.828 9.934 -54.903 1.00 37.98 O
ATOM 13 C1' G B 47 -11.719 9.673 -52.904 1.00 33.47 C
ATOM 14 N9 G B 47 -10.322 10.077 -53.002 1.00 32.96 N
ATOM 15 C8 G B 47 -9.288 9.329 -53.472 1.00 32.50 C
ATOM 16 N7 G B 47 -8.140 9.937 -53.379 1.00 32.39 N
ATOM 17 C5 G B 47 -8.436 11.180 -52.837 1.00 31.68 C
ATOM 18 C6 G B 47 -7.569 12.269 -52.495 1.00 31.45 C
ATOM 19 O6 G B 47 -6.327 12.330 -52.596 1.00 30.28 O
ATOM 20 N1 G B 47 -8.288 13.357 -51.969 1.00 30.06 N
ATOM 21 C2 G B 47 -9.653 13.375 -51.784 1.00 30.62 C
ATOM 22 N2 G B 47 -10.175 14.518 -51.320 1.00 30.83 N
ATOM 23 N3 G B 47 -10.460 12.345 -52.054 1.00 31.17 N
ATOM 24 C4 G B 47 -9.780 11.290 -52.591 1.00 32.08 C
ATOM 25 P U B 48 -16.001 8.797 -54.147 1.00 35.19 P
ATOM 26 OP1 U B 48 -16.094 7.330 -54.370 1.00 37.04 O
ATOM 27 OP2 U B 48 -15.896 9.688 -55.253 1.00 37.46 O
ATOM 28 O5' U B 48 -17.252 9.226 -53.246 1.00 35.91 O
TER
Atoms:
C2: (-11.104,9.898,-44.920)
OP1: (-6.337,4.664,-48.011)
OP2: (-6.030,7.269,-47.866)
C4: (-9.159,11.153,-45.334)
O5': (-8.069,6.126,-47.112)
C3': (-11.021,6.308,-47.318)
C1': (-11.202,7.493,-45.294)
O4': (-10.203,6.474,-45.107)
C5': (-8.877,5.030,-46.575)
P: (-6.494,5.918,-47.286)
O2: (-12.331,9.809,-44.532)
C4': (-10.279,5.548,-46.238)
C2': (-12.046,7.090,-46.510)
O2': (-13.068,6.196,-46.076)
N1: (-10.493,8.783,-45.410)
N3: (-10.420,11.070,-44.860)
N4: (-8.518,12.383,-45.250)
C6: (-9.217,8.845,-45.940)
C5: (-8.502,10.016,-45.908)
O3': (-11.668,5.373,-48.175)
OP1: (-6.337,4.664,-48.011)
OP2: (-6.030,7.269,-47.866)
C4: (-9.159,11.153,-45.334)
O5': (-8.069,6.126,-47.112)
C3': (-11.021,6.308,-47.318)
C1': (-11.202,7.493,-45.294)
O4': (-10.203,6.474,-45.107)
C5': (-8.877,5.030,-46.575)
P: (-6.494,5.918,-47.286)
O2: (-12.331,9.809,-44.532)
C4': (-10.279,5.548,-46.238)
C2': (-12.046,7.090,-46.510)
O2': (-13.068,6.196,-46.076)
N1: (-10.493,8.783,-45.410)
N3: (-10.420,11.070,-44.860)
N4: (-8.518,12.383,-45.250)
C6: (-9.217,8.845,-45.940)
C5: (-8.502,10.016,-45.908)
O3': (-11.668,5.373,-48.175)
OP1: (-11.818,4.109,-50.269)
OP2: (-9.974,5.941,-50.062)
C3': (-13.567,8.282,-53.288)
C1': (-11.719,9.673,-52.904)
C5': (-12.555,6.696,-51.651)
O6: (-6.327,12.330,-52.596)
O4': (-11.918,8.964,-51.718)
C8: (-9.288,9.329,-53.472)
C2: (-9.653,13.375,-51.784)
C6: (-7.569,12.269,-52.495)
C5: (-8.436,11.180,-52.837)
C4: (-9.780,11.290,-52.591)
P: (-11.352,5.388,-49.724)
C4': (-13.054,8.082,-51.862)
C2': (-12.423,8.944,-54.032)
O2': (-12.828,9.934,-54.903)
N1: (-8.288,13.357,-51.969)
N2: (-10.175,14.518,-51.320)
N3: (-10.460,12.345,-52.054)
N7: (-8.140,9.937,-53.379)
N9: (-10.322,10.077,-53.002)
O5': (-12.355,6.500,-50.253)
O3': (-14.754,9.044,-53.178)
OP2: (-9.974,5.941,-50.062)
C3': (-13.567,8.282,-53.288)
C1': (-11.719,9.673,-52.904)
C5': (-12.555,6.696,-51.651)
O6: (-6.327,12.330,-52.596)
O4': (-11.918,8.964,-51.718)
C8: (-9.288,9.329,-53.472)
C2: (-9.653,13.375,-51.784)
C6: (-7.569,12.269,-52.495)
C5: (-8.436,11.180,-52.837)
C4: (-9.780,11.290,-52.591)
P: (-11.352,5.388,-49.724)
C4': (-13.054,8.082,-51.862)
C2': (-12.423,8.944,-54.032)
O2': (-12.828,9.934,-54.903)
N1: (-8.288,13.357,-51.969)
N2: (-10.175,14.518,-51.320)
N3: (-10.460,12.345,-52.054)
N7: (-8.140,9.937,-53.379)
N9: (-10.322,10.077,-53.002)
O5': (-12.355,6.500,-50.253)
O3': (-14.754,9.044,-53.178)
Image (generated by PyMOL):