ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3FO4:A44:A45

Extra

PDB:
ATOM 1 O3' C A 43 -44.738 -8.489 5.935 1.00 20.29 O
ATOM 2 P C A 44 -46.194 -8.995 6.401 1.00 17.63 P
ATOM 3 OP1 C A 44 -47.115 -8.698 5.275 1.00 23.64 O
ATOM 4 OP2 C A 44 -46.494 -8.468 7.762 1.00 18.86 O
ATOM 5 O5' C A 44 -46.057 -10.570 6.546 1.00 21.18 O
ATOM 6 C5' C A 44 -45.688 -11.380 5.436 1.00 19.10 C
ATOM 7 C4' C A 44 -45.212 -12.722 5.929 1.00 19.13 C
ATOM 8 O4' C A 44 -44.123 -12.523 6.867 1.00 19.32 O
ATOM 9 C3' C A 44 -46.245 -13.493 6.729 1.00 19.92 C
ATOM 10 O3' C A 44 -47.084 -14.221 5.846 1.00 21.72 O
ATOM 11 C2' C A 44 -45.368 -14.422 7.559 1.00 16.54 C
ATOM 12 O2' C A 44 -44.907 -15.517 6.793 1.00 13.52 O
ATOM 13 C1' C A 44 -44.188 -13.507 7.887 1.00 17.96 C
ATOM 14 N1 C A 44 -44.271 -12.830 9.196 1.00 15.49 N
ATOM 15 C2 C A 44 -43.885 -13.536 10.339 1.00 15.82 C
ATOM 16 O2 C A 44 -43.536 -14.721 10.219 1.00 16.39 O
ATOM 17 N3 C A 44 -43.904 -12.912 11.544 1.00 13.18 N
ATOM 18 C4 C A 44 -44.305 -11.637 11.632 1.00 14.13 C
ATOM 19 N4 C A 44 -44.292 -11.052 12.846 1.00 8.53 N
ATOM 20 C5 C A 44 -44.732 -10.902 10.487 1.00 13.16 C
ATOM 21 C6 C A 44 -44.697 -11.532 9.297 1.00 15.33 C
ATOM 22 P G A 45 -48.650 -13.878 5.772 1.00 26.91 P
ATOM 23 OP1 G A 45 -49.166 -14.390 4.479 1.00 26.70 O
ATOM 24 OP2 G A 45 -48.842 -12.452 6.125 1.00 25.03 O
ATOM 25 O5' G A 45 -49.293 -14.749 6.934 1.00 26.01 O
TER

ATOM 1 O3' C B 44 -47.084 -14.221 5.846 1.00 21.72 O
ATOM 2 P G B 45 -48.650 -13.878 5.772 1.00 26.91 P
ATOM 3 OP1 G B 45 -49.166 -14.390 4.479 1.00 26.70 O
ATOM 4 OP2 G B 45 -48.842 -12.452 6.125 1.00 25.03 O
ATOM 5 O5' G B 45 -49.293 -14.749 6.934 1.00 26.01 O
ATOM 6 C5' G B 45 -50.695 -14.700 7.183 1.00 32.19 C
ATOM 7 C4' G B 45 -51.026 -15.467 8.439 1.00 34.99 C
ATOM 8 O4' G B 45 -50.833 -14.594 9.584 1.00 35.81 O
ATOM 9 C3' G B 45 -52.481 -15.914 8.525 1.00 37.17 C
ATOM 10 O3' G B 45 -52.579 -17.035 9.393 1.00 39.49 O
ATOM 11 C2' G B 45 -53.164 -14.712 9.162 1.00 38.05 C
ATOM 12 O2' G B 45 -54.331 -15.069 9.872 1.00 39.67 O
ATOM 13 C1' G B 45 -52.086 -14.248 10.139 1.00 37.55 C
ATOM 14 N9 G B 45 -52.084 -12.825 10.456 1.00 38.22 N
ATOM 15 C8 G B 45 -52.497 -11.782 9.660 1.00 38.44 C
ATOM 16 N7 G B 45 -52.373 -10.617 10.239 1.00 38.83 N
ATOM 17 C5 G B 45 -51.847 -10.910 11.490 1.00 38.66 C
ATOM 18 C6 G B 45 -51.494 -10.053 12.565 1.00 39.27 C
ATOM 19 O6 G B 45 -51.580 -8.820 12.630 1.00 39.88 O
ATOM 20 N1 G B 45 -50.993 -10.771 13.648 1.00 39.36 N
ATOM 21 C2 G B 45 -50.852 -12.136 13.695 1.00 38.23 C
ATOM 22 N2 G B 45 -50.351 -12.645 14.832 1.00 38.37 N
ATOM 23 N3 G B 45 -51.178 -12.944 12.700 1.00 38.47 N
ATOM 24 C4 G B 45 -51.664 -12.268 11.638 1.00 38.62 C
ATOM 25 P U B 46 -53.289 -18.374 8.880 1.00 40.37 P
ATOM 26 OP1 U B 46 -53.260 -18.358 7.395 1.00 41.30 O
ATOM 27 OP2 U B 46 -54.581 -18.526 9.591 1.00 41.41 O
ATOM 28 O5' U B 46 -52.325 -19.533 9.376 1.00 40.52 O
TER

Atoms:
C2: (-43.885,-13.536,10.339)
OP1: (-47.115,-8.698,5.275)
OP2: (-46.494,-8.468,7.762)
C4: (-44.305,-11.637,11.632)
O5': (-46.057,-10.570,6.546)
C3': (-46.245,-13.493,6.729)
C1': (-44.188,-13.507,7.887)
O4': (-44.123,-12.523,6.867)
C5': (-45.688,-11.380,5.436)
P: (-46.194,-8.995,6.401)
O2: (-43.536,-14.721,10.219)
C4': (-45.212,-12.722,5.929)
C2': (-45.368,-14.422,7.559)
O2': (-44.907,-15.517,6.793)
N1: (-44.271,-12.830,9.196)
N3: (-43.904,-12.912,11.544)
N4: (-44.292,-11.052,12.846)
C6: (-44.697,-11.532,9.297)
C5: (-44.732,-10.902,10.487)
O3': (-47.084,-14.221,5.846)
OP1: (-49.166,-14.390,4.479)
OP2: (-48.842,-12.452,6.125)
C3': (-52.481,-15.914,8.525)
C1': (-52.086,-14.248,10.139)
C5': (-50.695,-14.700,7.183)
O6: (-51.580,-8.820,12.630)
O4': (-50.833,-14.594,9.584)
C8: (-52.497,-11.782,9.660)
C2: (-50.852,-12.136,13.695)
C6: (-51.494,-10.053,12.565)
C5: (-51.847,-10.910,11.490)
C4: (-51.664,-12.268,11.638)
P: (-48.650,-13.878,5.772)
C4': (-51.026,-15.467,8.439)
C2': (-53.164,-14.712,9.162)
O2': (-54.331,-15.069,9.872)
N1: (-50.993,-10.771,13.648)
N2: (-50.351,-12.645,14.832)
N3: (-51.178,-12.944,12.700)
N7: (-52.373,-10.617,10.239)
N9: (-52.084,-12.825,10.456)
O5': (-49.293,-14.749,6.934)
O3': (-52.579,-17.035,9.393)
Image (generated by PyMOL):
PyMOL image
show in jmol