Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GER:A46:A47
Extra
PDB:
ATOM 1 O3' C A 45 44.511 6.988 6.005 1.00 17.99 O
ATOM 2 P C A 46 45.980 7.457 6.461 1.00 18.67 P
ATOM 3 OP1 C A 46 46.898 7.129 5.338 1.00 21.68 O
ATOM 4 OP2 C A 46 46.278 6.946 7.827 1.00 19.17 O
ATOM 5 O5' C A 46 45.884 9.044 6.591 1.00 19.72 O
ATOM 6 C5' C A 46 45.416 9.853 5.511 1.00 18.37 C
ATOM 7 C4' C A 46 45.011 11.220 6.023 1.00 18.28 C
ATOM 8 O4' C A 46 43.897 11.082 6.950 1.00 15.69 O
ATOM 9 C3' C A 46 46.067 11.959 6.829 1.00 18.50 C
ATOM 10 O3' C A 46 46.934 12.672 5.956 1.00 20.18 O
ATOM 11 C2' C A 46 45.214 12.933 7.635 1.00 17.27 C
ATOM 12 O2' C A 46 44.801 14.032 6.838 1.00 17.04 O
ATOM 13 C1' C A 46 43.998 12.066 7.963 1.00 15.86 C
ATOM 14 N1 C A 46 44.048 11.375 9.262 1.00 14.81 N
ATOM 15 C2 C A 46 43.596 12.046 10.397 1.00 13.83 C
ATOM 16 O2 C A 46 43.240 13.231 10.292 1.00 14.67 O
ATOM 17 N3 C A 46 43.557 11.390 11.584 1.00 14.27 N
ATOM 18 C4 C A 46 43.963 10.119 11.656 1.00 14.10 C
ATOM 19 N4 C A 46 43.870 9.496 12.839 1.00 14.85 N
ATOM 20 C5 C A 46 44.472 9.427 10.522 1.00 14.66 C
ATOM 21 C6 C A 46 44.497 10.086 9.355 1.00 15.48 C
ATOM 22 P G A 47 48.501 12.330 5.934 1.00 22.87 P
ATOM 23 OP1 G A 47 49.050 12.848 4.651 1.00 23.46 O
ATOM 24 OP2 G A 47 48.700 10.906 6.298 1.00 21.70 O
ATOM 25 O5' G A 47 49.106 13.203 7.113 1.00 23.29 O
TER
ATOM 1 O3' C B 46 46.934 12.672 5.956 1.00 20.18 O
ATOM 2 P G B 47 48.501 12.330 5.934 1.00 22.87 P
ATOM 3 OP1 G B 47 49.050 12.848 4.651 1.00 23.46 O
ATOM 4 OP2 G B 47 48.700 10.906 6.298 1.00 21.70 O
ATOM 5 O5' G B 47 49.106 13.203 7.113 1.00 23.29 O
ATOM 6 C5' G B 47 50.511 13.226 7.344 1.00 27.57 C
ATOM 7 C4' G B 47 50.812 13.962 8.624 1.00 29.08 C
ATOM 8 O4' G B 47 50.569 13.064 9.739 1.00 29.31 O
ATOM 9 C3' G B 47 52.273 14.374 8.758 1.00 30.82 C
ATOM 10 O3' G B 47 52.375 15.482 9.642 1.00 32.84 O
ATOM 11 C2' G B 47 52.912 13.141 9.386 1.00 30.98 C
ATOM 12 O2' G B 47 54.076 13.452 10.124 1.00 31.97 O
ATOM 13 C1' G B 47 51.799 12.687 10.327 1.00 30.06 C
ATOM 14 N9 G B 47 51.753 11.264 10.645 1.00 29.62 N
ATOM 15 C8 G B 47 52.135 10.206 9.856 1.00 30.04 C
ATOM 16 N7 G B 47 51.974 9.048 10.440 1.00 30.53 N
ATOM 17 C5 G B 47 51.453 9.364 11.688 1.00 29.28 C
ATOM 18 C6 G B 47 51.074 8.526 12.767 1.00 29.03 C
ATOM 19 O6 G B 47 51.121 7.290 12.839 1.00 29.13 O
ATOM 20 N1 G B 47 50.596 9.267 13.846 1.00 27.66 N
ATOM 21 C2 G B 47 50.494 10.634 13.883 1.00 27.16 C
ATOM 22 N2 G B 47 50.012 11.167 15.017 1.00 25.32 N
ATOM 23 N3 G B 47 50.841 11.424 12.884 1.00 27.98 N
ATOM 24 C4 G B 47 51.309 10.727 11.827 1.00 29.39 C
ATOM 25 P U B 48 53.149 16.806 9.171 1.00 35.03 P
ATOM 26 OP1 U B 48 53.283 16.745 7.693 1.00 35.08 O
ATOM 27 OP2 U B 48 54.358 16.968 10.015 1.00 35.47 O
ATOM 28 O5' U B 48 52.149 17.987 9.530 1.00 34.40 O
TER
ATOM 2 P C A 46 45.980 7.457 6.461 1.00 18.67 P
ATOM 3 OP1 C A 46 46.898 7.129 5.338 1.00 21.68 O
ATOM 4 OP2 C A 46 46.278 6.946 7.827 1.00 19.17 O
ATOM 5 O5' C A 46 45.884 9.044 6.591 1.00 19.72 O
ATOM 6 C5' C A 46 45.416 9.853 5.511 1.00 18.37 C
ATOM 7 C4' C A 46 45.011 11.220 6.023 1.00 18.28 C
ATOM 8 O4' C A 46 43.897 11.082 6.950 1.00 15.69 O
ATOM 9 C3' C A 46 46.067 11.959 6.829 1.00 18.50 C
ATOM 10 O3' C A 46 46.934 12.672 5.956 1.00 20.18 O
ATOM 11 C2' C A 46 45.214 12.933 7.635 1.00 17.27 C
ATOM 12 O2' C A 46 44.801 14.032 6.838 1.00 17.04 O
ATOM 13 C1' C A 46 43.998 12.066 7.963 1.00 15.86 C
ATOM 14 N1 C A 46 44.048 11.375 9.262 1.00 14.81 N
ATOM 15 C2 C A 46 43.596 12.046 10.397 1.00 13.83 C
ATOM 16 O2 C A 46 43.240 13.231 10.292 1.00 14.67 O
ATOM 17 N3 C A 46 43.557 11.390 11.584 1.00 14.27 N
ATOM 18 C4 C A 46 43.963 10.119 11.656 1.00 14.10 C
ATOM 19 N4 C A 46 43.870 9.496 12.839 1.00 14.85 N
ATOM 20 C5 C A 46 44.472 9.427 10.522 1.00 14.66 C
ATOM 21 C6 C A 46 44.497 10.086 9.355 1.00 15.48 C
ATOM 22 P G A 47 48.501 12.330 5.934 1.00 22.87 P
ATOM 23 OP1 G A 47 49.050 12.848 4.651 1.00 23.46 O
ATOM 24 OP2 G A 47 48.700 10.906 6.298 1.00 21.70 O
ATOM 25 O5' G A 47 49.106 13.203 7.113 1.00 23.29 O
TER
ATOM 1 O3' C B 46 46.934 12.672 5.956 1.00 20.18 O
ATOM 2 P G B 47 48.501 12.330 5.934 1.00 22.87 P
ATOM 3 OP1 G B 47 49.050 12.848 4.651 1.00 23.46 O
ATOM 4 OP2 G B 47 48.700 10.906 6.298 1.00 21.70 O
ATOM 5 O5' G B 47 49.106 13.203 7.113 1.00 23.29 O
ATOM 6 C5' G B 47 50.511 13.226 7.344 1.00 27.57 C
ATOM 7 C4' G B 47 50.812 13.962 8.624 1.00 29.08 C
ATOM 8 O4' G B 47 50.569 13.064 9.739 1.00 29.31 O
ATOM 9 C3' G B 47 52.273 14.374 8.758 1.00 30.82 C
ATOM 10 O3' G B 47 52.375 15.482 9.642 1.00 32.84 O
ATOM 11 C2' G B 47 52.912 13.141 9.386 1.00 30.98 C
ATOM 12 O2' G B 47 54.076 13.452 10.124 1.00 31.97 O
ATOM 13 C1' G B 47 51.799 12.687 10.327 1.00 30.06 C
ATOM 14 N9 G B 47 51.753 11.264 10.645 1.00 29.62 N
ATOM 15 C8 G B 47 52.135 10.206 9.856 1.00 30.04 C
ATOM 16 N7 G B 47 51.974 9.048 10.440 1.00 30.53 N
ATOM 17 C5 G B 47 51.453 9.364 11.688 1.00 29.28 C
ATOM 18 C6 G B 47 51.074 8.526 12.767 1.00 29.03 C
ATOM 19 O6 G B 47 51.121 7.290 12.839 1.00 29.13 O
ATOM 20 N1 G B 47 50.596 9.267 13.846 1.00 27.66 N
ATOM 21 C2 G B 47 50.494 10.634 13.883 1.00 27.16 C
ATOM 22 N2 G B 47 50.012 11.167 15.017 1.00 25.32 N
ATOM 23 N3 G B 47 50.841 11.424 12.884 1.00 27.98 N
ATOM 24 C4 G B 47 51.309 10.727 11.827 1.00 29.39 C
ATOM 25 P U B 48 53.149 16.806 9.171 1.00 35.03 P
ATOM 26 OP1 U B 48 53.283 16.745 7.693 1.00 35.08 O
ATOM 27 OP2 U B 48 54.358 16.968 10.015 1.00 35.47 O
ATOM 28 O5' U B 48 52.149 17.987 9.530 1.00 34.40 O
TER
Atoms:
C2: (43.596,12.046,10.397)
OP1: (46.898,7.129,5.338)
OP2: (46.278,6.946,7.827)
C4: (43.963,10.119,11.656)
O5': (45.884,9.044,6.591)
C3': (46.067,11.959,6.829)
C1': (43.998,12.066,7.963)
O4': (43.897,11.082,6.950)
C5': (45.416,9.853,5.511)
P: (45.980,7.457,6.461)
O2: (43.240,13.231,10.292)
C4': (45.011,11.220,6.023)
C2': (45.214,12.933,7.635)
O2': (44.801,14.032,6.838)
N1: (44.048,11.375,9.262)
N3: (43.557,11.390,11.584)
N4: (43.870,9.496,12.839)
C6: (44.497,10.086,9.355)
C5: (44.472,9.427,10.522)
O3': (46.934,12.672,5.956)
OP1: (46.898,7.129,5.338)
OP2: (46.278,6.946,7.827)
C4: (43.963,10.119,11.656)
O5': (45.884,9.044,6.591)
C3': (46.067,11.959,6.829)
C1': (43.998,12.066,7.963)
O4': (43.897,11.082,6.950)
C5': (45.416,9.853,5.511)
P: (45.980,7.457,6.461)
O2: (43.240,13.231,10.292)
C4': (45.011,11.220,6.023)
C2': (45.214,12.933,7.635)
O2': (44.801,14.032,6.838)
N1: (44.048,11.375,9.262)
N3: (43.557,11.390,11.584)
N4: (43.870,9.496,12.839)
C6: (44.497,10.086,9.355)
C5: (44.472,9.427,10.522)
O3': (46.934,12.672,5.956)
OP1: (49.050,12.848,4.651)
OP2: (48.700,10.906,6.298)
C3': (52.273,14.374,8.758)
C1': (51.799,12.687,10.327)
C5': (50.511,13.226,7.344)
O6: (51.121,7.290,12.839)
O4': (50.569,13.064,9.739)
C8: (52.135,10.206,9.856)
C2: (50.494,10.634,13.883)
C6: (51.074,8.526,12.767)
C5: (51.453,9.364,11.688)
C4: (51.309,10.727,11.827)
P: (48.501,12.330,5.934)
C4': (50.812,13.962,8.624)
C2': (52.912,13.141,9.386)
O2': (54.076,13.452,10.124)
N1: (50.596,9.267,13.846)
N2: (50.012,11.167,15.017)
N3: (50.841,11.424,12.884)
N7: (51.974,9.048,10.440)
N9: (51.753,11.264,10.645)
O5': (49.106,13.203,7.113)
O3': (52.375,15.482,9.642)
OP2: (48.700,10.906,6.298)
C3': (52.273,14.374,8.758)
C1': (51.799,12.687,10.327)
C5': (50.511,13.226,7.344)
O6: (51.121,7.290,12.839)
O4': (50.569,13.064,9.739)
C8: (52.135,10.206,9.856)
C2: (50.494,10.634,13.883)
C6: (51.074,8.526,12.767)
C5: (51.453,9.364,11.688)
C4: (51.309,10.727,11.827)
P: (48.501,12.330,5.934)
C4': (50.812,13.962,8.624)
C2': (52.912,13.141,9.386)
O2': (54.076,13.452,10.124)
N1: (50.596,9.267,13.846)
N2: (50.012,11.167,15.017)
N3: (50.841,11.424,12.884)
N7: (51.974,9.048,10.440)
N9: (51.753,11.264,10.645)
O5': (49.106,13.203,7.113)
O3': (52.375,15.482,9.642)
Image (generated by PyMOL):