ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3GES:A46:A47

Extra

PDB:
ATOM 1 O3' C A 45 21.219 -10.774 6.168 1.00 31.18 O
ATOM 2 P C A 46 19.711 -11.099 6.611 1.00 32.30 P
ATOM 3 OP1 C A 46 18.852 -10.703 5.465 1.00 35.13 O
ATOM 4 OP2 C A 46 19.449 -10.543 7.962 1.00 33.72 O
ATOM 5 O5' C A 46 19.685 -12.686 6.720 1.00 34.07 O
ATOM 6 C5' C A 46 20.239 -13.483 5.680 1.00 32.61 C
ATOM 7 C4' C A 46 20.683 -14.809 6.229 1.00 33.09 C
ATOM 8 O4' C A 46 21.743 -14.599 7.194 1.00 31.12 O
ATOM 9 C3' C A 46 19.619 -15.534 7.024 1.00 34.42 C
ATOM 10 O3' C A 46 18.747 -16.226 6.149 1.00 36.84 O
ATOM 11 C2' C A 46 20.454 -16.472 7.884 1.00 33.76 C
ATOM 12 O2' C A 46 20.889 -17.617 7.182 1.00 34.27 O
ATOM 13 C1' C A 46 21.658 -15.586 8.205 1.00 32.97 C
ATOM 14 N1 C A 46 21.590 -14.918 9.515 1.00 31.66 N
ATOM 15 C2 C A 46 22.039 -15.611 10.630 1.00 32.39 C
ATOM 16 O2 C A 46 22.417 -16.786 10.485 1.00 35.36 O
ATOM 17 N3 C A 46 22.049 -14.996 11.834 1.00 32.93 N
ATOM 18 C4 C A 46 21.613 -13.735 11.942 1.00 32.58 C
ATOM 19 N4 C A 46 21.669 -13.151 13.142 1.00 30.62 N
ATOM 20 C5 C A 46 21.111 -13.018 10.824 1.00 30.82 C
ATOM 21 C6 C A 46 21.117 -13.641 9.638 1.00 32.40 C
ATOM 22 P G A 47 17.177 -15.902 6.181 1.00 40.78 P
ATOM 23 OP1 G A 47 16.566 -16.398 4.925 1.00 41.45 O
ATOM 24 OP2 G A 47 16.996 -14.484 6.570 1.00 40.59 O
ATOM 25 O5' G A 47 16.634 -16.793 7.377 1.00 43.56 O
TER

ATOM 1 O3' C B 46 18.747 -16.226 6.149 1.00 36.84 O
ATOM 2 P G B 47 17.177 -15.902 6.181 1.00 40.78 P
ATOM 3 OP1 G B 47 16.566 -16.398 4.925 1.00 41.45 O
ATOM 4 OP2 G B 47 16.996 -14.484 6.570 1.00 40.59 O
ATOM 5 O5' G B 47 16.634 -16.793 7.377 1.00 43.56 O
ATOM 6 C5' G B 47 15.273 -16.707 7.776 1.00 47.80 C
ATOM 7 C4' G B 47 15.055 -17.503 9.033 1.00 50.57 C
ATOM 8 O4' G B 47 15.332 -16.654 10.176 1.00 51.68 O
ATOM 9 C3' G B 47 13.622 -17.970 9.226 1.00 51.72 C
ATOM 10 O3' G B 47 13.612 -19.106 10.064 1.00 52.37 O
ATOM 11 C2' G B 47 12.971 -16.799 9.945 1.00 52.50 C
ATOM 12 O2' G B 47 11.909 -17.232 10.774 1.00 53.77 O
ATOM 13 C1' G B 47 14.121 -16.320 10.824 1.00 51.98 C
ATOM 14 N9 G B 47 14.128 -14.893 11.120 1.00 52.20 N
ATOM 15 C8 G B 47 13.731 -13.854 10.313 1.00 51.60 C
ATOM 16 N7 G B 47 13.864 -12.688 10.883 1.00 51.82 N
ATOM 17 C5 G B 47 14.377 -12.979 12.141 1.00 52.45 C
ATOM 18 C6 G B 47 14.727 -12.123 13.214 1.00 52.78 C
ATOM 19 O6 G B 47 14.643 -10.889 13.276 1.00 52.68 O
ATOM 20 N1 G B 47 15.221 -12.843 14.302 1.00 52.73 N
ATOM 21 C2 G B 47 15.356 -14.211 14.350 1.00 51.94 C
ATOM 22 N2 G B 47 15.872 -14.731 15.476 1.00 51.70 N
ATOM 23 N3 G B 47 15.019 -15.012 13.363 1.00 51.44 N
ATOM 24 C4 G B 47 14.545 -14.335 12.298 1.00 51.92 C
ATOM 25 P U B 48 12.770 -20.387 9.632 1.00 52.44 P
ATOM 26 OP1 U B 48 12.614 -20.311 8.158 1.00 53.39 O
ATOM 27 OP2 U B 48 11.571 -20.458 10.499 1.00 52.81 O
ATOM 28 O5' U B 48 13.730 -21.608 9.971 1.00 51.34 O
TER

Atoms:
C2: (22.039,-15.611,10.630)
OP1: (18.852,-10.703,5.465)
OP2: (19.449,-10.543,7.962)
C4: (21.613,-13.735,11.942)
O5': (19.685,-12.686,6.720)
C3': (19.619,-15.534,7.024)
C1': (21.658,-15.586,8.205)
O4': (21.743,-14.599,7.194)
C5': (20.239,-13.483,5.680)
P: (19.711,-11.099,6.611)
O2: (22.417,-16.786,10.485)
C4': (20.683,-14.809,6.229)
C2': (20.454,-16.472,7.884)
O2': (20.889,-17.617,7.182)
N1: (21.590,-14.918,9.515)
N3: (22.049,-14.996,11.834)
N4: (21.669,-13.151,13.142)
C6: (21.117,-13.641,9.638)
C5: (21.111,-13.018,10.824)
O3': (18.747,-16.226,6.149)
OP1: (16.566,-16.398,4.925)
OP2: (16.996,-14.484,6.570)
C3': (13.622,-17.970,9.226)
C1': (14.121,-16.320,10.824)
C5': (15.273,-16.707,7.776)
O6: (14.643,-10.889,13.276)
O4': (15.332,-16.654,10.176)
C8: (13.731,-13.854,10.313)
C2: (15.356,-14.211,14.350)
C6: (14.727,-12.123,13.214)
C5: (14.377,-12.979,12.141)
C4: (14.545,-14.335,12.298)
P: (17.177,-15.902,6.181)
C4': (15.055,-17.503,9.033)
C2': (12.971,-16.799,9.945)
O2': (11.909,-17.232,10.774)
N1: (15.221,-12.843,14.302)
N2: (15.872,-14.731,15.476)
N3: (15.019,-15.012,13.363)
N7: (13.864,-12.688,10.883)
N9: (14.128,-14.893,11.120)
O5': (16.634,-16.793,7.377)
O3': (13.612,-19.106,10.064)
Image (generated by PyMOL):
PyMOL image
show in jmol