Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GOT:A46:A47
Extra
PDB:
ATOM 1 O3' C A 45 -44.685 -6.210 6.075 1.00 29.75 O
ATOM 2 P C A 46 -46.168 -6.696 6.490 1.00 31.05 P
ATOM 3 OP1 C A 46 -46.929 -6.326 5.254 1.00 33.24 O
ATOM 4 OP2 C A 46 -46.620 -6.210 7.825 1.00 31.71 O
ATOM 5 O5' C A 46 -46.144 -8.280 6.621 1.00 30.88 O
ATOM 6 C5' C A 46 -45.716 -9.099 5.535 1.00 30.70 C
ATOM 7 C4' C A 46 -45.269 -10.447 6.054 1.00 30.04 C
ATOM 8 O4' C A 46 -44.130 -10.323 6.945 1.00 27.19 O
ATOM 9 C3' C A 46 -46.304 -11.212 6.848 1.00 31.15 C
ATOM 10 O3' C A 46 -47.138 -11.893 5.939 1.00 33.62 O
ATOM 11 C2' C A 46 -45.430 -12.171 7.663 1.00 29.65 C
ATOM 12 O2' C A 46 -44.935 -13.253 6.901 1.00 32.92 O
ATOM 13 C1' C A 46 -44.239 -11.278 7.984 1.00 28.86 C
ATOM 14 N1 C A 46 -44.315 -10.586 9.283 1.00 29.46 N
ATOM 15 C2 C A 46 -43.924 -11.293 10.422 1.00 29.64 C
ATOM 16 O2 C A 46 -43.627 -12.504 10.306 1.00 31.07 O
ATOM 17 N3 C A 46 -43.873 -10.651 11.624 1.00 30.11 N
ATOM 18 C4 C A 46 -44.212 -9.351 11.712 1.00 29.77 C
ATOM 19 N4 C A 46 -44.064 -8.734 12.912 1.00 26.52 N
ATOM 20 C5 C A 46 -44.687 -8.621 10.575 1.00 28.40 C
ATOM 21 C6 C A 46 -44.716 -9.281 9.380 1.00 29.47 C
ATOM 22 P G A 47 -48.709 -11.550 5.881 1.00 36.53 P
ATOM 23 OP1 G A 47 -49.285 -12.145 4.641 1.00 37.88 O
ATOM 24 OP2 G A 47 -48.941 -10.128 6.167 1.00 34.75 O
ATOM 25 O5' G A 47 -49.305 -12.391 7.083 1.00 34.89 O
TER
ATOM 1 O3' C B 46 -47.138 -11.893 5.939 1.00 33.62 O
ATOM 2 P G B 47 -48.709 -11.550 5.881 1.00 36.53 P
ATOM 3 OP1 G B 47 -49.285 -12.145 4.641 1.00 37.88 O
ATOM 4 OP2 G B 47 -48.941 -10.128 6.167 1.00 34.75 O
ATOM 5 O5' G B 47 -49.305 -12.391 7.083 1.00 34.89 O
ATOM 6 C5' G B 47 -50.705 -12.450 7.261 1.00 39.39 C
ATOM 7 C4' G B 47 -51.034 -13.105 8.575 1.00 41.27 C
ATOM 8 O4' G B 47 -50.826 -12.146 9.645 1.00 41.62 O
ATOM 9 C3' G B 47 -52.479 -13.540 8.715 1.00 43.72 C
ATOM 10 O3' G B 47 -52.528 -14.656 9.595 1.00 46.37 O
ATOM 11 C2' G B 47 -53.138 -12.303 9.305 1.00 43.13 C
ATOM 12 O2' G B 47 -54.347 -12.606 9.952 1.00 43.99 O
ATOM 13 C1' G B 47 -52.055 -11.850 10.281 1.00 41.44 C
ATOM 14 N9 G B 47 -52.030 -10.433 10.634 1.00 40.81 N
ATOM 15 C8 G B 47 -52.397 -9.349 9.862 1.00 40.47 C
ATOM 16 N7 G B 47 -52.230 -8.203 10.479 1.00 40.07 N
ATOM 17 C5 G B 47 -51.737 -8.556 11.734 1.00 39.34 C
ATOM 18 C6 G B 47 -51.371 -7.745 12.845 1.00 39.72 C
ATOM 19 O6 G B 47 -51.425 -6.500 12.948 1.00 38.62 O
ATOM 20 N1 G B 47 -50.906 -8.524 13.919 1.00 38.21 N
ATOM 21 C2 G B 47 -50.819 -9.892 13.928 1.00 37.28 C
ATOM 22 N2 G B 47 -50.381 -10.465 15.075 1.00 33.57 N
ATOM 23 N3 G B 47 -51.150 -10.654 12.895 1.00 38.03 N
ATOM 24 C4 G B 47 -51.601 -9.924 11.843 1.00 39.77 C
ATOM 25 P U B 48 -53.084 -16.046 9.052 1.00 48.65 P
ATOM 26 OP1 U B 48 -52.978 -15.982 7.561 1.00 50.10 O
ATOM 27 OP2 U B 48 -54.393 -16.262 9.691 1.00 50.07 O
ATOM 28 O5' U B 48 -52.098 -17.155 9.617 1.00 48.27 O
TER
ATOM 2 P C A 46 -46.168 -6.696 6.490 1.00 31.05 P
ATOM 3 OP1 C A 46 -46.929 -6.326 5.254 1.00 33.24 O
ATOM 4 OP2 C A 46 -46.620 -6.210 7.825 1.00 31.71 O
ATOM 5 O5' C A 46 -46.144 -8.280 6.621 1.00 30.88 O
ATOM 6 C5' C A 46 -45.716 -9.099 5.535 1.00 30.70 C
ATOM 7 C4' C A 46 -45.269 -10.447 6.054 1.00 30.04 C
ATOM 8 O4' C A 46 -44.130 -10.323 6.945 1.00 27.19 O
ATOM 9 C3' C A 46 -46.304 -11.212 6.848 1.00 31.15 C
ATOM 10 O3' C A 46 -47.138 -11.893 5.939 1.00 33.62 O
ATOM 11 C2' C A 46 -45.430 -12.171 7.663 1.00 29.65 C
ATOM 12 O2' C A 46 -44.935 -13.253 6.901 1.00 32.92 O
ATOM 13 C1' C A 46 -44.239 -11.278 7.984 1.00 28.86 C
ATOM 14 N1 C A 46 -44.315 -10.586 9.283 1.00 29.46 N
ATOM 15 C2 C A 46 -43.924 -11.293 10.422 1.00 29.64 C
ATOM 16 O2 C A 46 -43.627 -12.504 10.306 1.00 31.07 O
ATOM 17 N3 C A 46 -43.873 -10.651 11.624 1.00 30.11 N
ATOM 18 C4 C A 46 -44.212 -9.351 11.712 1.00 29.77 C
ATOM 19 N4 C A 46 -44.064 -8.734 12.912 1.00 26.52 N
ATOM 20 C5 C A 46 -44.687 -8.621 10.575 1.00 28.40 C
ATOM 21 C6 C A 46 -44.716 -9.281 9.380 1.00 29.47 C
ATOM 22 P G A 47 -48.709 -11.550 5.881 1.00 36.53 P
ATOM 23 OP1 G A 47 -49.285 -12.145 4.641 1.00 37.88 O
ATOM 24 OP2 G A 47 -48.941 -10.128 6.167 1.00 34.75 O
ATOM 25 O5' G A 47 -49.305 -12.391 7.083 1.00 34.89 O
TER
ATOM 1 O3' C B 46 -47.138 -11.893 5.939 1.00 33.62 O
ATOM 2 P G B 47 -48.709 -11.550 5.881 1.00 36.53 P
ATOM 3 OP1 G B 47 -49.285 -12.145 4.641 1.00 37.88 O
ATOM 4 OP2 G B 47 -48.941 -10.128 6.167 1.00 34.75 O
ATOM 5 O5' G B 47 -49.305 -12.391 7.083 1.00 34.89 O
ATOM 6 C5' G B 47 -50.705 -12.450 7.261 1.00 39.39 C
ATOM 7 C4' G B 47 -51.034 -13.105 8.575 1.00 41.27 C
ATOM 8 O4' G B 47 -50.826 -12.146 9.645 1.00 41.62 O
ATOM 9 C3' G B 47 -52.479 -13.540 8.715 1.00 43.72 C
ATOM 10 O3' G B 47 -52.528 -14.656 9.595 1.00 46.37 O
ATOM 11 C2' G B 47 -53.138 -12.303 9.305 1.00 43.13 C
ATOM 12 O2' G B 47 -54.347 -12.606 9.952 1.00 43.99 O
ATOM 13 C1' G B 47 -52.055 -11.850 10.281 1.00 41.44 C
ATOM 14 N9 G B 47 -52.030 -10.433 10.634 1.00 40.81 N
ATOM 15 C8 G B 47 -52.397 -9.349 9.862 1.00 40.47 C
ATOM 16 N7 G B 47 -52.230 -8.203 10.479 1.00 40.07 N
ATOM 17 C5 G B 47 -51.737 -8.556 11.734 1.00 39.34 C
ATOM 18 C6 G B 47 -51.371 -7.745 12.845 1.00 39.72 C
ATOM 19 O6 G B 47 -51.425 -6.500 12.948 1.00 38.62 O
ATOM 20 N1 G B 47 -50.906 -8.524 13.919 1.00 38.21 N
ATOM 21 C2 G B 47 -50.819 -9.892 13.928 1.00 37.28 C
ATOM 22 N2 G B 47 -50.381 -10.465 15.075 1.00 33.57 N
ATOM 23 N3 G B 47 -51.150 -10.654 12.895 1.00 38.03 N
ATOM 24 C4 G B 47 -51.601 -9.924 11.843 1.00 39.77 C
ATOM 25 P U B 48 -53.084 -16.046 9.052 1.00 48.65 P
ATOM 26 OP1 U B 48 -52.978 -15.982 7.561 1.00 50.10 O
ATOM 27 OP2 U B 48 -54.393 -16.262 9.691 1.00 50.07 O
ATOM 28 O5' U B 48 -52.098 -17.155 9.617 1.00 48.27 O
TER
Atoms:
C2: (-43.924,-11.293,10.422)
OP1: (-46.929,-6.326,5.254)
OP2: (-46.620,-6.210,7.825)
C4: (-44.212,-9.351,11.712)
O5': (-46.144,-8.280,6.621)
C3': (-46.304,-11.212,6.848)
C1': (-44.239,-11.278,7.984)
O4': (-44.130,-10.323,6.945)
C5': (-45.716,-9.099,5.535)
P: (-46.168,-6.696,6.490)
O2: (-43.627,-12.504,10.306)
C4': (-45.269,-10.447,6.054)
C2': (-45.430,-12.171,7.663)
O2': (-44.935,-13.253,6.901)
N1: (-44.315,-10.586,9.283)
N3: (-43.873,-10.651,11.624)
N4: (-44.064,-8.734,12.912)
C6: (-44.716,-9.281,9.380)
C5: (-44.687,-8.621,10.575)
O3': (-47.138,-11.893,5.939)
OP1: (-46.929,-6.326,5.254)
OP2: (-46.620,-6.210,7.825)
C4: (-44.212,-9.351,11.712)
O5': (-46.144,-8.280,6.621)
C3': (-46.304,-11.212,6.848)
C1': (-44.239,-11.278,7.984)
O4': (-44.130,-10.323,6.945)
C5': (-45.716,-9.099,5.535)
P: (-46.168,-6.696,6.490)
O2: (-43.627,-12.504,10.306)
C4': (-45.269,-10.447,6.054)
C2': (-45.430,-12.171,7.663)
O2': (-44.935,-13.253,6.901)
N1: (-44.315,-10.586,9.283)
N3: (-43.873,-10.651,11.624)
N4: (-44.064,-8.734,12.912)
C6: (-44.716,-9.281,9.380)
C5: (-44.687,-8.621,10.575)
O3': (-47.138,-11.893,5.939)
OP1: (-49.285,-12.145,4.641)
OP2: (-48.941,-10.128,6.167)
C3': (-52.479,-13.540,8.715)
C1': (-52.055,-11.850,10.281)
C5': (-50.705,-12.450,7.261)
O6: (-51.425,-6.500,12.948)
O4': (-50.826,-12.146,9.645)
C8: (-52.397,-9.349,9.862)
C2: (-50.819,-9.892,13.928)
C6: (-51.371,-7.745,12.845)
C5: (-51.737,-8.556,11.734)
C4: (-51.601,-9.924,11.843)
P: (-48.709,-11.550,5.881)
C4': (-51.034,-13.105,8.575)
C2': (-53.138,-12.303,9.305)
O2': (-54.347,-12.606,9.952)
N1: (-50.906,-8.524,13.919)
N2: (-50.381,-10.465,15.075)
N3: (-51.150,-10.654,12.895)
N7: (-52.230,-8.203,10.479)
N9: (-52.030,-10.433,10.634)
O5': (-49.305,-12.391,7.083)
O3': (-52.528,-14.656,9.595)
OP2: (-48.941,-10.128,6.167)
C3': (-52.479,-13.540,8.715)
C1': (-52.055,-11.850,10.281)
C5': (-50.705,-12.450,7.261)
O6: (-51.425,-6.500,12.948)
O4': (-50.826,-12.146,9.645)
C8: (-52.397,-9.349,9.862)
C2: (-50.819,-9.892,13.928)
C6: (-51.371,-7.745,12.845)
C5: (-51.737,-8.556,11.734)
C4: (-51.601,-9.924,11.843)
P: (-48.709,-11.550,5.881)
C4': (-51.034,-13.105,8.575)
C2': (-53.138,-12.303,9.305)
O2': (-54.347,-12.606,9.952)
N1: (-50.906,-8.524,13.919)
N2: (-50.381,-10.465,15.075)
N3: (-51.150,-10.654,12.895)
N7: (-52.230,-8.203,10.479)
N9: (-52.030,-10.433,10.634)
O5': (-49.305,-12.391,7.083)
O3': (-52.528,-14.656,9.595)
Image (generated by PyMOL):