ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3IRW:R74:R75

Extra

PDB:
ATOM 1 O3' G A 73 4.834 -27.094 10.189 1.00 40.26 O
ATOM 2 P U A 74 5.470 -27.671 8.857 1.00 38.61 P
ATOM 3 OP1 U A 74 4.365 -28.212 8.032 1.00 38.58 O
ATOM 4 OP2 U A 74 6.625 -28.520 9.231 1.00 38.37 O
ATOM 5 O5' U A 74 6.033 -26.347 8.173 1.00 37.87 O
ATOM 6 C5' U A 74 5.185 -25.225 8.085 1.00 36.91 C
ATOM 7 C4' U A 74 6.027 -23.990 7.900 1.00 36.44 C
ATOM 8 O4' U A 74 6.841 -23.807 9.079 1.00 36.72 O
ATOM 9 C3' U A 74 7.044 -24.082 6.778 1.00 36.90 C
ATOM 10 O3' U A 74 6.417 -23.819 5.516 1.00 35.87 O
ATOM 11 C2' U A 74 7.994 -22.962 7.188 1.00 37.75 C
ATOM 12 O2' U A 74 7.502 -21.686 6.827 1.00 39.32 O
ATOM 13 C1' U A 74 8.015 -23.105 8.716 1.00 36.73 C
ATOM 14 N1 U A 74 9.200 -23.851 9.226 1.00 35.90 N
ATOM 15 C2 U A 74 10.394 -23.176 9.409 1.00 35.48 C
ATOM 16 O2 U A 74 10.529 -21.984 9.180 1.00 34.82 O
ATOM 17 N3 U A 74 11.432 -23.952 9.873 1.00 34.33 N
ATOM 18 C4 U A 74 11.393 -25.306 10.168 1.00 35.01 C
ATOM 19 O4 U A 74 12.404 -25.869 10.584 1.00 34.81 O
ATOM 20 C5 U A 74 10.112 -25.939 9.951 1.00 34.70 C
ATOM 21 C6 U A 74 9.088 -25.204 9.496 1.00 35.20 C
ATOM 22 P A A 75 6.419 -24.914 4.346 1.00 33.24 P
ATOM 23 OP1 A A 75 5.953 -24.246 3.115 1.00 32.53 O
ATOM 24 OP2 A A 75 5.733 -26.130 4.837 1.00 33.01 O
ATOM 25 O5' A A 75 7.966 -25.273 4.174 1.00 33.43 O
TER

ATOM 1 O3' U B 74 6.417 -23.819 5.516 1.00 35.87 O
ATOM 2 P A B 75 6.419 -24.914 4.346 1.00 33.24 P
ATOM 3 OP1 A B 75 5.953 -24.246 3.115 1.00 32.53 O
ATOM 4 OP2 A B 75 5.733 -26.130 4.837 1.00 33.01 O
ATOM 5 O5' A B 75 7.966 -25.273 4.174 1.00 33.43 O
ATOM 6 C5' A B 75 8.883 -24.233 3.942 1.00 32.14 C
ATOM 7 C4' A B 75 9.934 -24.652 2.935 1.00 31.79 C
ATOM 8 O4' A B 75 10.828 -25.624 3.524 1.00 30.72 O
ATOM 9 C3' A B 75 9.409 -25.278 1.653 1.00 30.33 C
ATOM 10 O3' A B 75 10.154 -24.761 0.558 1.00 31.65 O
ATOM 11 C2' A B 75 9.697 -26.755 1.854 1.00 28.70 C
ATOM 12 O2' A B 75 9.920 -27.404 0.624 1.00 28.37 O
ATOM 13 C1' A B 75 10.998 -26.689 2.630 1.00 30.24 C
ATOM 14 N9 A B 75 11.279 -27.885 3.415 1.00 33.04 N
ATOM 15 C8 A B 75 10.380 -28.834 3.816 1.00 33.64 C
ATOM 16 N7 A B 75 10.919 -29.805 4.519 1.00 34.13 N
ATOM 17 C5 A B 75 12.261 -29.468 4.585 1.00 32.80 C
ATOM 18 C6 A B 75 13.366 -30.090 5.193 1.00 32.45 C
ATOM 19 N6 A B 75 13.279 -31.236 5.872 1.00 32.93 N
ATOM 20 N1 A B 75 14.569 -29.492 5.077 1.00 33.45 N
ATOM 21 C2 A B 75 14.652 -28.346 4.395 1.00 33.62 C
ATOM 22 N3 A B 75 13.683 -27.666 3.783 1.00 34.94 N
ATOM 23 C4 A B 75 12.500 -28.286 3.916 1.00 33.39 C
ATOM 24 P G B 76 9.437 -24.510 -0.844 1.00 34.01 P
ATOM 25 OP1 G B 76 8.346 -25.506 -0.976 1.00 33.23 O
ATOM 26 OP2 G B 76 10.494 -24.418 -1.873 1.00 36.17 O
ATOM 27 O5' G B 76 8.788 -23.053 -0.695 1.00 32.99 O
TER

Atoms:
C4: (11.393,-25.306,10.168)
N3: (11.432,-23.952,9.873)
OP1: (4.365,-28.212,8.032)
OP2: (6.625,-28.520,9.231)
C2: (10.394,-23.176,9.409)
C1': (8.015,-23.105,8.716)
C3': (7.044,-24.082,6.778)
O5': (6.033,-26.347,8.173)
O4': (6.841,-23.807,9.079)
C5': (5.185,-25.225,8.085)
P: (5.470,-27.671,8.857)
C4': (6.027,-23.990,7.900)
C2': (7.994,-22.962,7.188)
O2': (7.502,-21.686,6.827)
N1: (9.200,-23.851,9.226)
O4: (12.404,-25.869,10.584)
O2: (10.529,-21.984,9.180)
C6: (9.088,-25.204,9.496)
C5: (10.112,-25.939,9.951)
O3': (6.417,-23.819,5.516)
OP1: (5.953,-24.246,3.115)
OP2: (5.733,-26.130,4.837)
C3': (9.409,-25.278,1.653)
C1': (10.998,-26.689,2.630)
C5': (8.883,-24.233,3.942)
O4': (10.828,-25.624,3.524)
C8: (10.380,-28.834,3.816)
O2': (9.920,-27.404,0.624)
C6: (13.366,-30.090,5.193)
C5: (12.261,-29.468,4.585)
C4: (12.500,-28.286,3.916)
P: (6.419,-24.914,4.346)
C4': (9.934,-24.652,2.935)
C2': (9.697,-26.755,1.854)
C2: (14.652,-28.346,4.395)
N1: (14.569,-29.492,5.077)
N3: (13.683,-27.666,3.783)
N6: (13.279,-31.236,5.872)
N7: (10.919,-29.805,4.519)
N9: (11.279,-27.885,3.415)
O5': (7.966,-25.273,4.174)
O3': (10.154,-24.761,0.558)
Image (generated by PyMOL):
PyMOL image
show in jmol