Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YLS:A0:A1
Extra
PDB:
ATOM 1 OP3 G A 0 26.573 23.341 20.866 1.00 39.75 O
ATOM 2 P G A 0 28.036 23.183 20.630 1.00 38.86 P
ATOM 3 OP1 G A 0 28.757 23.111 21.963 1.00 36.74 O
ATOM 4 OP2 G A 0 28.404 24.248 19.674 1.00 37.63 O
ATOM 5 O5' G A 0 28.238 21.793 19.823 1.00 35.86 O
ATOM 6 C5' G A 0 27.319 20.690 19.932 1.00 32.07 C
ATOM 7 C4' G A 0 28.042 19.398 20.283 1.00 29.79 C
ATOM 8 O4' G A 0 28.931 19.003 19.211 1.00 27.80 O
ATOM 9 C3' G A 0 28.924 19.490 21.509 1.00 29.20 C
ATOM 10 O3' G A 0 28.196 19.150 22.658 1.00 30.02 O
ATOM 11 C2' G A 0 30.021 18.485 21.224 1.00 28.19 C
ATOM 12 O2' G A 0 29.665 17.172 21.575 1.00 28.63 O
ATOM 13 C1' G A 0 30.191 18.640 19.728 1.00 27.13 C
ATOM 14 N9 G A 0 31.170 19.667 19.410 1.00 25.78 N
ATOM 15 C8 G A 0 30.956 20.912 18.884 1.00 25.29 C
ATOM 16 N7 G A 0 32.054 21.594 18.735 1.00 24.24 N
ATOM 17 C5 G A 0 33.050 20.750 19.179 1.00 23.86 C
ATOM 18 C6 G A 0 34.455 20.933 19.254 1.00 23.43 C
ATOM 19 O6 G A 0 35.120 21.913 18.948 1.00 22.21 O
ATOM 20 N1 G A 0 35.098 19.836 19.780 1.00 23.56 N
ATOM 21 C2 G A 0 34.442 18.697 20.164 1.00 24.96 C
ATOM 22 N2 G A 0 35.198 17.727 20.642 1.00 26.00 N
ATOM 23 N3 G A 0 33.137 18.508 20.105 1.00 24.82 N
ATOM 24 C4 G A 0 32.510 19.572 19.604 1.00 24.63 C
ATOM 25 P G A 1 28.728 19.613 24.088 1.00 31.25 P
ATOM 26 OP1 G A 1 27.737 19.126 25.065 1.00 31.48 O
ATOM 27 OP2 G A 1 29.104 21.077 24.009 1.00 31.75 O
ATOM 28 O5' G A 1 30.061 18.768 24.293 1.00 28.01 O
TER
ATOM 1 O3' G B 0 28.196 19.150 22.658 1.00 30.02 O
ATOM 2 P G B 1 28.728 19.613 24.088 1.00 31.25 P
ATOM 3 OP1 G B 1 27.737 19.126 25.065 1.00 31.48 O
ATOM 4 OP2 G B 1 29.104 21.077 24.009 1.00 31.75 O
ATOM 5 O5' G B 1 30.061 18.768 24.293 1.00 28.01 O
ATOM 6 C5' G B 1 29.995 17.502 24.832 1.00 26.07 C
ATOM 7 C4' G B 1 31.385 16.967 25.007 1.00 25.16 C
ATOM 8 O4' G B 1 32.170 17.202 23.825 1.00 23.73 O
ATOM 9 C3' G B 1 32.140 17.626 26.120 1.00 24.82 C
ATOM 10 O3' G B 1 31.869 16.929 27.297 1.00 26.04 O
ATOM 11 C2' G B 1 33.582 17.473 25.691 1.00 24.20 C
ATOM 12 O2' G B 1 34.146 16.257 26.114 1.00 25.14 O
ATOM 13 C1' G B 1 33.490 17.540 24.180 1.00 23.12 C
ATOM 14 N9 G B 1 33.772 18.864 23.678 1.00 22.36 N
ATOM 15 C8 G B 1 32.866 19.836 23.336 1.00 22.09 C
ATOM 16 N7 G B 1 33.421 20.930 22.927 1.00 21.42 N
ATOM 17 C5 G B 1 34.772 20.669 23.007 1.00 20.74 C
ATOM 18 C6 G B 1 35.858 21.490 22.699 1.00 20.20 C
ATOM 19 O6 G B 1 35.834 22.631 22.287 1.00 20.03 O
ATOM 20 N1 G B 1 37.068 20.866 22.919 1.00 20.36 N
ATOM 21 C2 G B 1 37.199 19.589 23.386 1.00 20.46 C
ATOM 22 N2 G B 1 38.446 19.153 23.532 1.00 20.28 N
ATOM 23 N3 G B 1 36.183 18.794 23.689 1.00 20.44 N
ATOM 24 C4 G B 1 35.003 19.404 23.469 1.00 21.21 C
ATOM 25 P A B 2 30.954 17.568 28.428 1.00 28.41 P
ATOM 26 OP1 A B 2 29.800 16.673 28.628 1.00 28.27 O
ATOM 27 OP2 A B 2 30.694 18.984 28.097 1.00 30.47 O
ATOM 28 O5' A B 2 31.945 17.546 29.690 1.00 25.52 O
TER
ATOM 2 P G A 0 28.036 23.183 20.630 1.00 38.86 P
ATOM 3 OP1 G A 0 28.757 23.111 21.963 1.00 36.74 O
ATOM 4 OP2 G A 0 28.404 24.248 19.674 1.00 37.63 O
ATOM 5 O5' G A 0 28.238 21.793 19.823 1.00 35.86 O
ATOM 6 C5' G A 0 27.319 20.690 19.932 1.00 32.07 C
ATOM 7 C4' G A 0 28.042 19.398 20.283 1.00 29.79 C
ATOM 8 O4' G A 0 28.931 19.003 19.211 1.00 27.80 O
ATOM 9 C3' G A 0 28.924 19.490 21.509 1.00 29.20 C
ATOM 10 O3' G A 0 28.196 19.150 22.658 1.00 30.02 O
ATOM 11 C2' G A 0 30.021 18.485 21.224 1.00 28.19 C
ATOM 12 O2' G A 0 29.665 17.172 21.575 1.00 28.63 O
ATOM 13 C1' G A 0 30.191 18.640 19.728 1.00 27.13 C
ATOM 14 N9 G A 0 31.170 19.667 19.410 1.00 25.78 N
ATOM 15 C8 G A 0 30.956 20.912 18.884 1.00 25.29 C
ATOM 16 N7 G A 0 32.054 21.594 18.735 1.00 24.24 N
ATOM 17 C5 G A 0 33.050 20.750 19.179 1.00 23.86 C
ATOM 18 C6 G A 0 34.455 20.933 19.254 1.00 23.43 C
ATOM 19 O6 G A 0 35.120 21.913 18.948 1.00 22.21 O
ATOM 20 N1 G A 0 35.098 19.836 19.780 1.00 23.56 N
ATOM 21 C2 G A 0 34.442 18.697 20.164 1.00 24.96 C
ATOM 22 N2 G A 0 35.198 17.727 20.642 1.00 26.00 N
ATOM 23 N3 G A 0 33.137 18.508 20.105 1.00 24.82 N
ATOM 24 C4 G A 0 32.510 19.572 19.604 1.00 24.63 C
ATOM 25 P G A 1 28.728 19.613 24.088 1.00 31.25 P
ATOM 26 OP1 G A 1 27.737 19.126 25.065 1.00 31.48 O
ATOM 27 OP2 G A 1 29.104 21.077 24.009 1.00 31.75 O
ATOM 28 O5' G A 1 30.061 18.768 24.293 1.00 28.01 O
TER
ATOM 1 O3' G B 0 28.196 19.150 22.658 1.00 30.02 O
ATOM 2 P G B 1 28.728 19.613 24.088 1.00 31.25 P
ATOM 3 OP1 G B 1 27.737 19.126 25.065 1.00 31.48 O
ATOM 4 OP2 G B 1 29.104 21.077 24.009 1.00 31.75 O
ATOM 5 O5' G B 1 30.061 18.768 24.293 1.00 28.01 O
ATOM 6 C5' G B 1 29.995 17.502 24.832 1.00 26.07 C
ATOM 7 C4' G B 1 31.385 16.967 25.007 1.00 25.16 C
ATOM 8 O4' G B 1 32.170 17.202 23.825 1.00 23.73 O
ATOM 9 C3' G B 1 32.140 17.626 26.120 1.00 24.82 C
ATOM 10 O3' G B 1 31.869 16.929 27.297 1.00 26.04 O
ATOM 11 C2' G B 1 33.582 17.473 25.691 1.00 24.20 C
ATOM 12 O2' G B 1 34.146 16.257 26.114 1.00 25.14 O
ATOM 13 C1' G B 1 33.490 17.540 24.180 1.00 23.12 C
ATOM 14 N9 G B 1 33.772 18.864 23.678 1.00 22.36 N
ATOM 15 C8 G B 1 32.866 19.836 23.336 1.00 22.09 C
ATOM 16 N7 G B 1 33.421 20.930 22.927 1.00 21.42 N
ATOM 17 C5 G B 1 34.772 20.669 23.007 1.00 20.74 C
ATOM 18 C6 G B 1 35.858 21.490 22.699 1.00 20.20 C
ATOM 19 O6 G B 1 35.834 22.631 22.287 1.00 20.03 O
ATOM 20 N1 G B 1 37.068 20.866 22.919 1.00 20.36 N
ATOM 21 C2 G B 1 37.199 19.589 23.386 1.00 20.46 C
ATOM 22 N2 G B 1 38.446 19.153 23.532 1.00 20.28 N
ATOM 23 N3 G B 1 36.183 18.794 23.689 1.00 20.44 N
ATOM 24 C4 G B 1 35.003 19.404 23.469 1.00 21.21 C
ATOM 25 P A B 2 30.954 17.568 28.428 1.00 28.41 P
ATOM 26 OP1 A B 2 29.800 16.673 28.628 1.00 28.27 O
ATOM 27 OP2 A B 2 30.694 18.984 28.097 1.00 30.47 O
ATOM 28 O5' A B 2 31.945 17.546 29.690 1.00 25.52 O
TER
Atoms:
OP1: (28.757,23.111,21.963)
OP2: (28.404,24.248,19.674)
OP3: (26.573,23.341,20.866)
C3': (28.924,19.490,21.509)
C1': (30.191,18.640,19.728)
C5': (27.319,20.690,19.932)
O6: (35.120,21.913,18.948)
O4': (28.931,19.003,19.211)
C8: (30.956,20.912,18.884)
C2: (34.442,18.697,20.164)
C6: (34.455,20.933,19.254)
C5: (33.050,20.750,19.179)
C4: (32.510,19.572,19.604)
P: (28.036,23.183,20.630)
C4': (28.042,19.398,20.283)
C2': (30.021,18.485,21.224)
O2': (29.665,17.172,21.575)
N1: (35.098,19.836,19.780)
N2: (35.198,17.727,20.642)
N3: (33.137,18.508,20.105)
N7: (32.054,21.594,18.735)
N9: (31.170,19.667,19.410)
O5': (28.238,21.793,19.823)
O3': (28.196,19.150,22.658)
OP2: (28.404,24.248,19.674)
OP3: (26.573,23.341,20.866)
C3': (28.924,19.490,21.509)
C1': (30.191,18.640,19.728)
C5': (27.319,20.690,19.932)
O6: (35.120,21.913,18.948)
O4': (28.931,19.003,19.211)
C8: (30.956,20.912,18.884)
C2: (34.442,18.697,20.164)
C6: (34.455,20.933,19.254)
C5: (33.050,20.750,19.179)
C4: (32.510,19.572,19.604)
P: (28.036,23.183,20.630)
C4': (28.042,19.398,20.283)
C2': (30.021,18.485,21.224)
O2': (29.665,17.172,21.575)
N1: (35.098,19.836,19.780)
N2: (35.198,17.727,20.642)
N3: (33.137,18.508,20.105)
N7: (32.054,21.594,18.735)
N9: (31.170,19.667,19.410)
O5': (28.238,21.793,19.823)
O3': (28.196,19.150,22.658)
OP1: (27.737,19.126,25.065)
OP2: (29.104,21.077,24.009)
C3': (32.140,17.626,26.120)
C1': (33.490,17.540,24.180)
C5': (29.995,17.502,24.832)
O6: (35.834,22.631,22.287)
O4': (32.170,17.202,23.825)
C8: (32.866,19.836,23.336)
C2: (37.199,19.589,23.386)
C6: (35.858,21.490,22.699)
C5: (34.772,20.669,23.007)
C4: (35.003,19.404,23.469)
P: (28.728,19.613,24.088)
C4': (31.385,16.967,25.007)
C2': (33.582,17.473,25.691)
O2': (34.146,16.257,26.114)
N1: (37.068,20.866,22.919)
N2: (38.446,19.153,23.532)
N3: (36.183,18.794,23.689)
N7: (33.421,20.930,22.927)
N9: (33.772,18.864,23.678)
O5': (30.061,18.768,24.293)
O3': (31.869,16.929,27.297)
OP2: (29.104,21.077,24.009)
C3': (32.140,17.626,26.120)
C1': (33.490,17.540,24.180)
C5': (29.995,17.502,24.832)
O6: (35.834,22.631,22.287)
O4': (32.170,17.202,23.825)
C8: (32.866,19.836,23.336)
C2: (37.199,19.589,23.386)
C6: (35.858,21.490,22.699)
C5: (34.772,20.669,23.007)
C4: (35.003,19.404,23.469)
P: (28.728,19.613,24.088)
C4': (31.385,16.967,25.007)
C2': (33.582,17.473,25.691)
O2': (34.146,16.257,26.114)
N1: (37.068,20.866,22.919)
N2: (38.446,19.153,23.532)
N3: (36.183,18.794,23.689)
N7: (33.421,20.930,22.927)
N9: (33.772,18.864,23.678)
O5': (30.061,18.768,24.293)
O3': (31.869,16.929,27.297)
Image (generated by PyMOL):