Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01905:01906
Extra
PDB:
ATOM 1 O3' C A1904 111.325 106.007 99.028 1.00 79.12 O
ATOM 2 P G A1905 110.288 106.491 100.156 1.00 82.38 P
ATOM 3 OP1 G A1905 109.389 107.538 99.599 1.00 82.45 O
ATOM 4 OP2 G A1905 111.057 106.767 101.403 1.00 82.04 O
ATOM 5 O5' G A1905 109.392 105.203 100.395 1.00 85.57 O
ATOM 6 C5' G A1905 109.688 104.295 101.459 1.00 90.65 C
ATOM 7 C4' G A1905 108.988 102.988 101.224 1.00 93.52 C
ATOM 8 O4' G A1905 109.481 102.395 99.997 1.00 92.63 O
ATOM 9 C3' G A1905 109.260 101.936 102.280 1.00 95.66 C
ATOM 10 O3' G A1905 108.417 102.101 103.404 1.00 99.54 O
ATOM 11 C2' G A1905 108.988 100.647 101.527 1.00 95.51 C
ATOM 12 O2' G A1905 107.608 100.358 101.411 1.00 97.24 O
ATOM 13 C1' G A1905 109.572 100.991 100.156 1.00 94.28 C
ATOM 14 N9 G A1905 110.978 100.621 100.068 1.00 94.14 N
ATOM 15 C8 G A1905 112.067 101.377 100.431 1.00 93.94 C
ATOM 16 N7 G A1905 113.201 100.765 100.231 1.00 93.84 N
ATOM 17 C5 G A1905 112.837 99.535 99.706 1.00 93.94 C
ATOM 18 C6 G A1905 113.634 98.448 99.289 1.00 94.13 C
ATOM 19 O6 G A1905 114.869 98.352 99.290 1.00 93.97 O
ATOM 20 N1 G A1905 112.852 97.393 98.828 1.00 94.26 N
ATOM 21 C2 G A1905 111.478 97.389 98.780 1.00 94.46 C
ATOM 22 N2 G A1905 110.896 96.276 98.331 1.00 95.85 N
ATOM 23 N3 G A1905 110.729 98.402 99.153 1.00 94.20 N
ATOM 24 C4 G A1905 111.468 99.433 99.604 1.00 94.23 C
ATOM 25 P G A1906 108.853 101.476 104.810 1.00102.89 P
ATOM 26 OP1 G A1906 107.869 101.950 105.817 1.00102.59 O
ATOM 27 OP2 G A1906 110.302 101.762 105.008 1.00102.81 O
ATOM 28 O5' G A1906 108.670 99.906 104.592 1.00104.00 O
TER
ATOM 1 O3' G B1905 108.417 102.101 103.404 1.00 99.54 O
ATOM 2 P G B1906 108.853 101.476 104.810 1.00102.89 P
ATOM 3 OP1 G B1906 107.869 101.950 105.817 1.00102.59 O
ATOM 4 OP2 G B1906 110.302 101.762 105.008 1.00102.81 O
ATOM 5 O5' G B1906 108.670 99.906 104.592 1.00104.00 O
ATOM 6 C5' G B1906 107.355 99.309 104.559 1.00106.10 C
ATOM 7 C4' G B1906 107.456 97.797 104.518 1.00107.66 C
ATOM 8 O4' G B1906 107.964 97.362 103.226 1.00107.65 O
ATOM 9 C3' G B1906 108.414 97.163 105.513 1.00108.60 C
ATOM 10 O3' G B1906 107.879 97.055 106.822 1.00110.59 O
ATOM 11 C2' G B1906 108.685 95.808 104.875 1.00108.15 C
ATOM 12 O2' G B1906 107.646 94.877 105.102 1.00107.41 O
ATOM 13 C1' G B1906 108.755 96.191 103.393 1.00107.98 C
ATOM 14 N9 G B1906 110.127 96.496 102.987 1.00108.12 N
ATOM 15 C8 G B1906 110.749 97.725 103.018 1.00108.31 C
ATOM 16 N7 G B1906 111.998 97.679 102.642 1.00107.65 N
ATOM 17 C5 G B1906 112.215 96.343 102.332 1.00107.12 C
ATOM 18 C6 G B1906 113.384 95.690 101.881 1.00106.18 C
ATOM 19 O6 G B1906 114.497 96.176 101.666 1.00105.26 O
ATOM 20 N1 G B1906 113.168 94.328 101.687 1.00106.00 N
ATOM 21 C2 G B1906 111.979 93.678 101.903 1.00105.88 C
ATOM 22 N2 G B1906 111.971 92.360 101.656 1.00105.71 N
ATOM 23 N3 G B1906 110.879 94.275 102.330 1.00106.59 N
ATOM 24 C4 G B1906 111.067 95.600 102.525 1.00107.56 C
ATOM 25 P G B1907 108.880 96.949 108.073 1.00113.03 P
ATOM 26 OP1 G B1907 108.056 96.793 109.299 1.00112.33 O
ATOM 27 OP2 G B1907 109.871 98.058 107.989 1.00111.97 O
ATOM 28 O5' G B1907 109.657 95.583 107.811 1.00115.72 O
TER
ATOM 2 P G A1905 110.288 106.491 100.156 1.00 82.38 P
ATOM 3 OP1 G A1905 109.389 107.538 99.599 1.00 82.45 O
ATOM 4 OP2 G A1905 111.057 106.767 101.403 1.00 82.04 O
ATOM 5 O5' G A1905 109.392 105.203 100.395 1.00 85.57 O
ATOM 6 C5' G A1905 109.688 104.295 101.459 1.00 90.65 C
ATOM 7 C4' G A1905 108.988 102.988 101.224 1.00 93.52 C
ATOM 8 O4' G A1905 109.481 102.395 99.997 1.00 92.63 O
ATOM 9 C3' G A1905 109.260 101.936 102.280 1.00 95.66 C
ATOM 10 O3' G A1905 108.417 102.101 103.404 1.00 99.54 O
ATOM 11 C2' G A1905 108.988 100.647 101.527 1.00 95.51 C
ATOM 12 O2' G A1905 107.608 100.358 101.411 1.00 97.24 O
ATOM 13 C1' G A1905 109.572 100.991 100.156 1.00 94.28 C
ATOM 14 N9 G A1905 110.978 100.621 100.068 1.00 94.14 N
ATOM 15 C8 G A1905 112.067 101.377 100.431 1.00 93.94 C
ATOM 16 N7 G A1905 113.201 100.765 100.231 1.00 93.84 N
ATOM 17 C5 G A1905 112.837 99.535 99.706 1.00 93.94 C
ATOM 18 C6 G A1905 113.634 98.448 99.289 1.00 94.13 C
ATOM 19 O6 G A1905 114.869 98.352 99.290 1.00 93.97 O
ATOM 20 N1 G A1905 112.852 97.393 98.828 1.00 94.26 N
ATOM 21 C2 G A1905 111.478 97.389 98.780 1.00 94.46 C
ATOM 22 N2 G A1905 110.896 96.276 98.331 1.00 95.85 N
ATOM 23 N3 G A1905 110.729 98.402 99.153 1.00 94.20 N
ATOM 24 C4 G A1905 111.468 99.433 99.604 1.00 94.23 C
ATOM 25 P G A1906 108.853 101.476 104.810 1.00102.89 P
ATOM 26 OP1 G A1906 107.869 101.950 105.817 1.00102.59 O
ATOM 27 OP2 G A1906 110.302 101.762 105.008 1.00102.81 O
ATOM 28 O5' G A1906 108.670 99.906 104.592 1.00104.00 O
TER
ATOM 1 O3' G B1905 108.417 102.101 103.404 1.00 99.54 O
ATOM 2 P G B1906 108.853 101.476 104.810 1.00102.89 P
ATOM 3 OP1 G B1906 107.869 101.950 105.817 1.00102.59 O
ATOM 4 OP2 G B1906 110.302 101.762 105.008 1.00102.81 O
ATOM 5 O5' G B1906 108.670 99.906 104.592 1.00104.00 O
ATOM 6 C5' G B1906 107.355 99.309 104.559 1.00106.10 C
ATOM 7 C4' G B1906 107.456 97.797 104.518 1.00107.66 C
ATOM 8 O4' G B1906 107.964 97.362 103.226 1.00107.65 O
ATOM 9 C3' G B1906 108.414 97.163 105.513 1.00108.60 C
ATOM 10 O3' G B1906 107.879 97.055 106.822 1.00110.59 O
ATOM 11 C2' G B1906 108.685 95.808 104.875 1.00108.15 C
ATOM 12 O2' G B1906 107.646 94.877 105.102 1.00107.41 O
ATOM 13 C1' G B1906 108.755 96.191 103.393 1.00107.98 C
ATOM 14 N9 G B1906 110.127 96.496 102.987 1.00108.12 N
ATOM 15 C8 G B1906 110.749 97.725 103.018 1.00108.31 C
ATOM 16 N7 G B1906 111.998 97.679 102.642 1.00107.65 N
ATOM 17 C5 G B1906 112.215 96.343 102.332 1.00107.12 C
ATOM 18 C6 G B1906 113.384 95.690 101.881 1.00106.18 C
ATOM 19 O6 G B1906 114.497 96.176 101.666 1.00105.26 O
ATOM 20 N1 G B1906 113.168 94.328 101.687 1.00106.00 N
ATOM 21 C2 G B1906 111.979 93.678 101.903 1.00105.88 C
ATOM 22 N2 G B1906 111.971 92.360 101.656 1.00105.71 N
ATOM 23 N3 G B1906 110.879 94.275 102.330 1.00106.59 N
ATOM 24 C4 G B1906 111.067 95.600 102.525 1.00107.56 C
ATOM 25 P G B1907 108.880 96.949 108.073 1.00113.03 P
ATOM 26 OP1 G B1907 108.056 96.793 109.299 1.00112.33 O
ATOM 27 OP2 G B1907 109.871 98.058 107.989 1.00111.97 O
ATOM 28 O5' G B1907 109.657 95.583 107.811 1.00115.72 O
TER
Atoms:
OP1: (109.389,107.538,99.599)
OP2: (111.057,106.767,101.403)
C3': (109.260,101.936,102.280)
C1': (109.572,100.991,100.156)
C5': (109.688,104.295,101.459)
O6: (114.869,98.352,99.290)
O4': (109.481,102.395,99.997)
C8: (112.067,101.377,100.431)
C2: (111.478,97.389,98.780)
C6: (113.634,98.448,99.289)
C5: (112.837,99.535,99.706)
C4: (111.468,99.433,99.604)
P: (110.288,106.491,100.156)
C4': (108.988,102.988,101.224)
C2': (108.988,100.647,101.527)
O2': (107.608,100.358,101.411)
N1: (112.852,97.393,98.828)
N2: (110.896,96.276,98.331)
N3: (110.729,98.402,99.153)
N7: (113.201,100.765,100.231)
N9: (110.978,100.621,100.068)
O5': (109.392,105.203,100.395)
O3': (108.417,102.101,103.404)
OP2: (111.057,106.767,101.403)
C3': (109.260,101.936,102.280)
C1': (109.572,100.991,100.156)
C5': (109.688,104.295,101.459)
O6: (114.869,98.352,99.290)
O4': (109.481,102.395,99.997)
C8: (112.067,101.377,100.431)
C2: (111.478,97.389,98.780)
C6: (113.634,98.448,99.289)
C5: (112.837,99.535,99.706)
C4: (111.468,99.433,99.604)
P: (110.288,106.491,100.156)
C4': (108.988,102.988,101.224)
C2': (108.988,100.647,101.527)
O2': (107.608,100.358,101.411)
N1: (112.852,97.393,98.828)
N2: (110.896,96.276,98.331)
N3: (110.729,98.402,99.153)
N7: (113.201,100.765,100.231)
N9: (110.978,100.621,100.068)
O5': (109.392,105.203,100.395)
O3': (108.417,102.101,103.404)
OP1: (107.869,101.950,105.817)
OP2: (110.302,101.762,105.008)
C3': (108.414,97.163,105.513)
C1': (108.755,96.191,103.393)
C5': (107.355,99.309,104.559)
O6: (114.497,96.176,101.666)
O4': (107.964,97.362,103.226)
C8: (110.749,97.725,103.018)
C2: (111.979,93.678,101.903)
C6: (113.384,95.690,101.881)
C5: (112.215,96.343,102.332)
C4: (111.067,95.600,102.525)
P: (108.853,101.476,104.810)
C4': (107.456,97.797,104.518)
C2': (108.685,95.808,104.875)
O2': (107.646,94.877,105.102)
N1: (113.168,94.328,101.687)
N2: (111.971,92.360,101.656)
N3: (110.879,94.275,102.330)
N7: (111.998,97.679,102.642)
N9: (110.127,96.496,102.987)
O5': (108.670,99.906,104.592)
O3': (107.879,97.055,106.822)
OP2: (110.302,101.762,105.008)
C3': (108.414,97.163,105.513)
C1': (108.755,96.191,103.393)
C5': (107.355,99.309,104.559)
O6: (114.497,96.176,101.666)
O4': (107.964,97.362,103.226)
C8: (110.749,97.725,103.018)
C2: (111.979,93.678,101.903)
C6: (113.384,95.690,101.881)
C5: (112.215,96.343,102.332)
C4: (111.067,95.600,102.525)
P: (108.853,101.476,104.810)
C4': (107.456,97.797,104.518)
C2': (108.685,95.808,104.875)
O2': (107.646,94.877,105.102)
N1: (113.168,94.328,101.687)
N2: (111.971,92.360,101.656)
N3: (110.879,94.275,102.330)
N7: (111.998,97.679,102.642)
N9: (110.127,96.496,102.987)
O5': (108.670,99.906,104.592)
O3': (107.879,97.055,106.822)
Image (generated by PyMOL):