Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:A46:A47
Extra
PDB:
ATOM 1 O3' C A 45 12.043 5.343 -29.164 1.00 38.26 O
ATOM 2 P U A 46 11.436 6.280 -30.317 1.00 50.34 P
ATOM 3 OP1 U A 46 12.476 7.278 -30.663 1.00 38.97 O
ATOM 4 OP2 U A 46 10.117 6.760 -29.839 1.00 52.79 O
ATOM 5 O5' U A 46 11.235 5.266 -31.525 1.00 50.08 O
ATOM 6 C5' U A 46 12.328 4.523 -32.043 1.00 47.08 C
ATOM 7 C4' U A 46 11.861 3.455 -32.999 1.00 38.69 C
ATOM 8 O4' U A 46 11.236 2.372 -32.262 1.00 35.78 O
ATOM 9 C3' U A 46 10.798 3.880 -33.999 1.00 42.34 C
ATOM 10 O3' U A 46 11.330 4.575 -35.113 1.00 45.99 O
ATOM 11 C2' U A 46 10.136 2.558 -34.359 1.00 43.40 C
ATOM 12 O2' U A 46 10.937 1.830 -35.279 1.00 43.05 O
ATOM 13 C1' U A 46 10.168 1.833 -33.014 1.00 37.85 C
ATOM 14 N1 U A 46 8.916 2.019 -32.254 1.00 39.07 N
ATOM 15 C2 U A 46 7.934 1.064 -32.426 1.00 36.64 C
ATOM 16 O2 U A 46 8.064 0.107 -33.172 1.00 37.76 O
ATOM 17 N3 U A 46 6.793 1.276 -31.699 1.00 34.79 N
ATOM 18 C4 U A 46 6.542 2.316 -30.835 1.00 39.90 C
ATOM 19 O4 U A 46 5.458 2.358 -30.255 1.00 45.11 O
ATOM 20 C5 U A 46 7.608 3.261 -30.708 1.00 42.60 C
ATOM 21 C6 U A 46 8.736 3.086 -31.403 1.00 41.81 C
ATOM 22 P G A 47 11.073 6.153 -35.277 1.00 51.07 P
ATOM 23 OP1 G A 47 12.194 6.696 -36.082 1.00 48.89 O
ATOM 24 OP2 G A 47 10.842 6.700 -33.919 1.00 41.99 O
ATOM 25 O5' G A 47 9.723 6.209 -36.120 1.00 45.61 O
TER
ATOM 1 O3' U B 46 11.330 4.575 -35.113 1.00 45.99 O
ATOM 2 P G B 47 11.073 6.153 -35.277 1.00 51.07 P
ATOM 3 OP1 G B 47 12.194 6.696 -36.082 1.00 48.89 O
ATOM 4 OP2 G B 47 10.842 6.700 -33.919 1.00 41.99 O
ATOM 5 O5' G B 47 9.723 6.209 -36.120 1.00 45.61 O
ATOM 6 C5' G B 47 9.438 5.223 -37.107 1.00 45.56 C
ATOM 7 C4' G B 47 8.063 5.402 -37.706 1.00 49.40 C
ATOM 8 O4' G B 47 7.086 5.554 -36.639 1.00 44.44 O
ATOM 9 C3' G B 47 7.894 6.617 -38.620 1.00 49.11 C
ATOM 10 O3' G B 47 7.020 6.278 -39.699 1.00 51.76 O
ATOM 11 C2' G B 47 7.209 7.634 -37.709 1.00 46.00 C
ATOM 12 O2' G B 47 6.454 8.615 -38.387 1.00 46.08 O
ATOM 13 C1' G B 47 6.327 6.728 -36.854 1.00 42.40 C
ATOM 14 N9 G B 47 5.969 7.291 -35.549 1.00 39.19 N
ATOM 15 C8 G B 47 6.714 8.136 -34.762 1.00 41.82 C
ATOM 16 N7 G B 47 6.116 8.467 -33.649 1.00 40.62 N
ATOM 17 C5 G B 47 4.900 7.801 -33.704 1.00 39.92 C
ATOM 18 C6 G B 47 3.824 7.774 -32.776 1.00 41.73 C
ATOM 19 O6 G B 47 3.738 8.355 -31.684 1.00 47.86 O
ATOM 20 N1 G B 47 2.777 6.970 -33.225 1.00 38.50 N
ATOM 21 C2 G B 47 2.768 6.280 -34.412 1.00 41.21 C
ATOM 22 N2 G B 47 1.671 5.558 -34.673 1.00 38.70 N
ATOM 23 N3 G B 47 3.762 6.298 -35.282 1.00 43.51 N
ATOM 24 C4 G B 47 4.790 7.073 -34.871 1.00 40.97 C
ATOM 25 P U B 48 7.620 5.701 -41.075 1.00 55.98 P
ATOM 26 OP1 U B 48 9.075 5.510 -40.872 1.00 59.99 O
ATOM 27 OP2 U B 48 7.166 6.604 -42.159 1.00 63.72 O
ATOM 28 O5' U B 48 6.900 4.284 -41.214 1.00 55.96 O
TER
ATOM 2 P U A 46 11.436 6.280 -30.317 1.00 50.34 P
ATOM 3 OP1 U A 46 12.476 7.278 -30.663 1.00 38.97 O
ATOM 4 OP2 U A 46 10.117 6.760 -29.839 1.00 52.79 O
ATOM 5 O5' U A 46 11.235 5.266 -31.525 1.00 50.08 O
ATOM 6 C5' U A 46 12.328 4.523 -32.043 1.00 47.08 C
ATOM 7 C4' U A 46 11.861 3.455 -32.999 1.00 38.69 C
ATOM 8 O4' U A 46 11.236 2.372 -32.262 1.00 35.78 O
ATOM 9 C3' U A 46 10.798 3.880 -33.999 1.00 42.34 C
ATOM 10 O3' U A 46 11.330 4.575 -35.113 1.00 45.99 O
ATOM 11 C2' U A 46 10.136 2.558 -34.359 1.00 43.40 C
ATOM 12 O2' U A 46 10.937 1.830 -35.279 1.00 43.05 O
ATOM 13 C1' U A 46 10.168 1.833 -33.014 1.00 37.85 C
ATOM 14 N1 U A 46 8.916 2.019 -32.254 1.00 39.07 N
ATOM 15 C2 U A 46 7.934 1.064 -32.426 1.00 36.64 C
ATOM 16 O2 U A 46 8.064 0.107 -33.172 1.00 37.76 O
ATOM 17 N3 U A 46 6.793 1.276 -31.699 1.00 34.79 N
ATOM 18 C4 U A 46 6.542 2.316 -30.835 1.00 39.90 C
ATOM 19 O4 U A 46 5.458 2.358 -30.255 1.00 45.11 O
ATOM 20 C5 U A 46 7.608 3.261 -30.708 1.00 42.60 C
ATOM 21 C6 U A 46 8.736 3.086 -31.403 1.00 41.81 C
ATOM 22 P G A 47 11.073 6.153 -35.277 1.00 51.07 P
ATOM 23 OP1 G A 47 12.194 6.696 -36.082 1.00 48.89 O
ATOM 24 OP2 G A 47 10.842 6.700 -33.919 1.00 41.99 O
ATOM 25 O5' G A 47 9.723 6.209 -36.120 1.00 45.61 O
TER
ATOM 1 O3' U B 46 11.330 4.575 -35.113 1.00 45.99 O
ATOM 2 P G B 47 11.073 6.153 -35.277 1.00 51.07 P
ATOM 3 OP1 G B 47 12.194 6.696 -36.082 1.00 48.89 O
ATOM 4 OP2 G B 47 10.842 6.700 -33.919 1.00 41.99 O
ATOM 5 O5' G B 47 9.723 6.209 -36.120 1.00 45.61 O
ATOM 6 C5' G B 47 9.438 5.223 -37.107 1.00 45.56 C
ATOM 7 C4' G B 47 8.063 5.402 -37.706 1.00 49.40 C
ATOM 8 O4' G B 47 7.086 5.554 -36.639 1.00 44.44 O
ATOM 9 C3' G B 47 7.894 6.617 -38.620 1.00 49.11 C
ATOM 10 O3' G B 47 7.020 6.278 -39.699 1.00 51.76 O
ATOM 11 C2' G B 47 7.209 7.634 -37.709 1.00 46.00 C
ATOM 12 O2' G B 47 6.454 8.615 -38.387 1.00 46.08 O
ATOM 13 C1' G B 47 6.327 6.728 -36.854 1.00 42.40 C
ATOM 14 N9 G B 47 5.969 7.291 -35.549 1.00 39.19 N
ATOM 15 C8 G B 47 6.714 8.136 -34.762 1.00 41.82 C
ATOM 16 N7 G B 47 6.116 8.467 -33.649 1.00 40.62 N
ATOM 17 C5 G B 47 4.900 7.801 -33.704 1.00 39.92 C
ATOM 18 C6 G B 47 3.824 7.774 -32.776 1.00 41.73 C
ATOM 19 O6 G B 47 3.738 8.355 -31.684 1.00 47.86 O
ATOM 20 N1 G B 47 2.777 6.970 -33.225 1.00 38.50 N
ATOM 21 C2 G B 47 2.768 6.280 -34.412 1.00 41.21 C
ATOM 22 N2 G B 47 1.671 5.558 -34.673 1.00 38.70 N
ATOM 23 N3 G B 47 3.762 6.298 -35.282 1.00 43.51 N
ATOM 24 C4 G B 47 4.790 7.073 -34.871 1.00 40.97 C
ATOM 25 P U B 48 7.620 5.701 -41.075 1.00 55.98 P
ATOM 26 OP1 U B 48 9.075 5.510 -40.872 1.00 59.99 O
ATOM 27 OP2 U B 48 7.166 6.604 -42.159 1.00 63.72 O
ATOM 28 O5' U B 48 6.900 4.284 -41.214 1.00 55.96 O
TER
Atoms:
C4: (6.542,2.316,-30.835)
N3: (6.793,1.276,-31.699)
OP1: (12.476,7.278,-30.663)
OP2: (10.117,6.760,-29.839)
C2: (7.934,1.064,-32.426)
C1': (10.168,1.833,-33.014)
C3': (10.798,3.880,-33.999)
O5': (11.235,5.266,-31.525)
O4': (11.236,2.372,-32.262)
C5': (12.328,4.523,-32.043)
P: (11.436,6.280,-30.317)
C4': (11.861,3.455,-32.999)
C2': (10.136,2.558,-34.359)
O2': (10.937,1.830,-35.279)
N1: (8.916,2.019,-32.254)
O4: (5.458,2.358,-30.255)
O2: (8.064,0.107,-33.172)
C6: (8.736,3.086,-31.403)
C5: (7.608,3.261,-30.708)
O3': (11.330,4.575,-35.113)
N3: (6.793,1.276,-31.699)
OP1: (12.476,7.278,-30.663)
OP2: (10.117,6.760,-29.839)
C2: (7.934,1.064,-32.426)
C1': (10.168,1.833,-33.014)
C3': (10.798,3.880,-33.999)
O5': (11.235,5.266,-31.525)
O4': (11.236,2.372,-32.262)
C5': (12.328,4.523,-32.043)
P: (11.436,6.280,-30.317)
C4': (11.861,3.455,-32.999)
C2': (10.136,2.558,-34.359)
O2': (10.937,1.830,-35.279)
N1: (8.916,2.019,-32.254)
O4: (5.458,2.358,-30.255)
O2: (8.064,0.107,-33.172)
C6: (8.736,3.086,-31.403)
C5: (7.608,3.261,-30.708)
O3': (11.330,4.575,-35.113)
OP1: (12.194,6.696,-36.082)
OP2: (10.842,6.700,-33.919)
C3': (7.894,6.617,-38.620)
C1': (6.327,6.728,-36.854)
C5': (9.438,5.223,-37.107)
O6: (3.738,8.355,-31.684)
O4': (7.086,5.554,-36.639)
C8: (6.714,8.136,-34.762)
C2: (2.768,6.280,-34.412)
C6: (3.824,7.774,-32.776)
C5: (4.900,7.801,-33.704)
C4: (4.790,7.073,-34.871)
P: (11.073,6.153,-35.277)
C4': (8.063,5.402,-37.706)
C2': (7.209,7.634,-37.709)
O2': (6.454,8.615,-38.387)
N1: (2.777,6.970,-33.225)
N2: (1.671,5.558,-34.673)
N3: (3.762,6.298,-35.282)
N7: (6.116,8.467,-33.649)
N9: (5.969,7.291,-35.549)
O5': (9.723,6.209,-36.120)
O3': (7.020,6.278,-39.699)
OP2: (10.842,6.700,-33.919)
C3': (7.894,6.617,-38.620)
C1': (6.327,6.728,-36.854)
C5': (9.438,5.223,-37.107)
O6: (3.738,8.355,-31.684)
O4': (7.086,5.554,-36.639)
C8: (6.714,8.136,-34.762)
C2: (2.768,6.280,-34.412)
C6: (3.824,7.774,-32.776)
C5: (4.900,7.801,-33.704)
C4: (4.790,7.073,-34.871)
P: (11.073,6.153,-35.277)
C4': (8.063,5.402,-37.706)
C2': (7.209,7.634,-37.709)
O2': (6.454,8.615,-38.387)
N1: (2.777,6.970,-33.225)
N2: (1.671,5.558,-34.673)
N3: (3.762,6.298,-35.282)
N7: (6.116,8.467,-33.649)
N9: (5.969,7.291,-35.549)
O5': (9.723,6.209,-36.120)
O3': (7.020,6.278,-39.699)
Image (generated by PyMOL):