Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2349:A2350
Extra
PDB:
ATOM 1 O3' G A2348 82.327 101.656 154.424 1.00 92.40 O
ATOM 2 P C A2349 82.351 101.652 156.031 1.00 94.23 P
ATOM 3 OP1 C A2349 80.986 102.000 156.493 1.00 93.53 O
ATOM 4 OP2 C A2349 83.498 102.488 156.455 1.00 94.28 O
ATOM 5 O5' C A2349 82.635 100.132 156.415 1.00 96.98 O
ATOM 6 C5' C A2349 83.914 99.516 156.153 1.00101.99 C
ATOM 7 C4' C A2349 84.441 98.839 157.404 1.00105.28 C
ATOM 8 O4' C A2349 84.746 99.846 158.396 1.00106.74 O
ATOM 9 C3' C A2349 83.487 97.912 158.156 1.00106.83 C
ATOM 10 O3' C A2349 83.446 96.606 157.552 1.00106.97 O
ATOM 11 C2' C A2349 84.122 97.848 159.551 1.00108.13 C
ATOM 12 O2' C A2349 85.115 96.845 159.682 1.00109.04 O
ATOM 13 C1' C A2349 84.805 99.219 159.665 1.00108.84 C
ATOM 14 N1 C A2349 84.295 100.139 160.705 1.00110.72 N
ATOM 15 C2 C A2349 84.569 99.857 162.063 1.00111.75 C
ATOM 16 O2 C A2349 85.215 98.835 162.359 1.00112.30 O
ATOM 17 N3 C A2349 84.122 100.708 163.014 1.00112.20 N
ATOM 18 C4 C A2349 83.429 101.796 162.666 1.00112.03 C
ATOM 19 N4 C A2349 83.012 102.612 163.643 1.00111.67 N
ATOM 20 C5 C A2349 83.133 102.100 161.302 1.00111.87 C
ATOM 21 C6 C A2349 83.580 101.253 160.366 1.00111.39 C
ATOM 22 P A A2350 82.076 95.747 157.546 1.00106.76 P
ATOM 23 OP1 A A2350 82.396 94.377 157.044 1.00106.53 O
ATOM 24 OP2 A A2350 81.020 96.537 156.869 1.00107.16 O
ATOM 25 O5' A A2350 81.682 95.641 159.082 1.00105.22 O
TER
ATOM 1 O3' C B2349 83.446 96.606 157.552 1.00106.97 O
ATOM 2 P A B2350 82.076 95.747 157.546 1.00106.76 P
ATOM 3 OP1 A B2350 82.396 94.377 157.044 1.00106.53 O
ATOM 4 OP2 A B2350 81.020 96.537 156.869 1.00107.16 O
ATOM 5 O5' A B2350 81.682 95.641 159.082 1.00105.22 O
ATOM 6 C5' A B2350 81.691 94.377 159.770 1.00104.02 C
ATOM 7 C4' A B2350 80.451 94.251 160.615 1.00102.96 C
ATOM 8 O4' A B2350 80.342 95.421 161.467 1.00102.46 O
ATOM 9 C3' A B2350 79.163 94.260 159.812 1.00102.22 C
ATOM 10 O3' A B2350 78.846 92.950 159.371 1.00102.30 O
ATOM 11 C2' A B2350 78.146 94.800 160.805 1.00101.77 C
ATOM 12 O2' A B2350 77.692 93.815 161.709 1.00100.04 O
ATOM 13 C1' A B2350 78.988 95.836 161.548 1.00101.94 C
ATOM 14 N9 A B2350 78.889 97.183 160.984 1.00101.91 N
ATOM 15 C8 A B2350 79.801 97.840 160.194 1.00102.12 C
ATOM 16 N7 A B2350 79.444 99.059 159.876 1.00101.93 N
ATOM 17 C5 A B2350 78.213 99.215 160.491 1.00101.72 C
ATOM 18 C6 A B2350 77.318 100.295 160.546 1.00102.13 C
ATOM 19 N6 A B2350 77.547 101.473 159.961 1.00102.25 N
ATOM 20 N1 A B2350 76.168 100.125 161.235 1.00102.24 N
ATOM 21 C2 A B2350 75.950 98.945 161.833 1.00102.15 C
ATOM 22 N3 A B2350 76.721 97.859 161.862 1.00101.57 N
ATOM 23 C4 A B2350 77.851 98.063 161.165 1.00101.72 C
ATOM 24 P C B2351 77.713 92.742 158.258 1.00101.96 P
ATOM 25 OP1 C B2351 77.641 91.292 157.948 1.00103.23 O
ATOM 26 OP2 C B2351 77.978 93.713 157.162 1.00101.91 O
ATOM 27 O5' C B2351 76.368 93.142 159.007 1.00100.82 O
TER
ATOM 2 P C A2349 82.351 101.652 156.031 1.00 94.23 P
ATOM 3 OP1 C A2349 80.986 102.000 156.493 1.00 93.53 O
ATOM 4 OP2 C A2349 83.498 102.488 156.455 1.00 94.28 O
ATOM 5 O5' C A2349 82.635 100.132 156.415 1.00 96.98 O
ATOM 6 C5' C A2349 83.914 99.516 156.153 1.00101.99 C
ATOM 7 C4' C A2349 84.441 98.839 157.404 1.00105.28 C
ATOM 8 O4' C A2349 84.746 99.846 158.396 1.00106.74 O
ATOM 9 C3' C A2349 83.487 97.912 158.156 1.00106.83 C
ATOM 10 O3' C A2349 83.446 96.606 157.552 1.00106.97 O
ATOM 11 C2' C A2349 84.122 97.848 159.551 1.00108.13 C
ATOM 12 O2' C A2349 85.115 96.845 159.682 1.00109.04 O
ATOM 13 C1' C A2349 84.805 99.219 159.665 1.00108.84 C
ATOM 14 N1 C A2349 84.295 100.139 160.705 1.00110.72 N
ATOM 15 C2 C A2349 84.569 99.857 162.063 1.00111.75 C
ATOM 16 O2 C A2349 85.215 98.835 162.359 1.00112.30 O
ATOM 17 N3 C A2349 84.122 100.708 163.014 1.00112.20 N
ATOM 18 C4 C A2349 83.429 101.796 162.666 1.00112.03 C
ATOM 19 N4 C A2349 83.012 102.612 163.643 1.00111.67 N
ATOM 20 C5 C A2349 83.133 102.100 161.302 1.00111.87 C
ATOM 21 C6 C A2349 83.580 101.253 160.366 1.00111.39 C
ATOM 22 P A A2350 82.076 95.747 157.546 1.00106.76 P
ATOM 23 OP1 A A2350 82.396 94.377 157.044 1.00106.53 O
ATOM 24 OP2 A A2350 81.020 96.537 156.869 1.00107.16 O
ATOM 25 O5' A A2350 81.682 95.641 159.082 1.00105.22 O
TER
ATOM 1 O3' C B2349 83.446 96.606 157.552 1.00106.97 O
ATOM 2 P A B2350 82.076 95.747 157.546 1.00106.76 P
ATOM 3 OP1 A B2350 82.396 94.377 157.044 1.00106.53 O
ATOM 4 OP2 A B2350 81.020 96.537 156.869 1.00107.16 O
ATOM 5 O5' A B2350 81.682 95.641 159.082 1.00105.22 O
ATOM 6 C5' A B2350 81.691 94.377 159.770 1.00104.02 C
ATOM 7 C4' A B2350 80.451 94.251 160.615 1.00102.96 C
ATOM 8 O4' A B2350 80.342 95.421 161.467 1.00102.46 O
ATOM 9 C3' A B2350 79.163 94.260 159.812 1.00102.22 C
ATOM 10 O3' A B2350 78.846 92.950 159.371 1.00102.30 O
ATOM 11 C2' A B2350 78.146 94.800 160.805 1.00101.77 C
ATOM 12 O2' A B2350 77.692 93.815 161.709 1.00100.04 O
ATOM 13 C1' A B2350 78.988 95.836 161.548 1.00101.94 C
ATOM 14 N9 A B2350 78.889 97.183 160.984 1.00101.91 N
ATOM 15 C8 A B2350 79.801 97.840 160.194 1.00102.12 C
ATOM 16 N7 A B2350 79.444 99.059 159.876 1.00101.93 N
ATOM 17 C5 A B2350 78.213 99.215 160.491 1.00101.72 C
ATOM 18 C6 A B2350 77.318 100.295 160.546 1.00102.13 C
ATOM 19 N6 A B2350 77.547 101.473 159.961 1.00102.25 N
ATOM 20 N1 A B2350 76.168 100.125 161.235 1.00102.24 N
ATOM 21 C2 A B2350 75.950 98.945 161.833 1.00102.15 C
ATOM 22 N3 A B2350 76.721 97.859 161.862 1.00101.57 N
ATOM 23 C4 A B2350 77.851 98.063 161.165 1.00101.72 C
ATOM 24 P C B2351 77.713 92.742 158.258 1.00101.96 P
ATOM 25 OP1 C B2351 77.641 91.292 157.948 1.00103.23 O
ATOM 26 OP2 C B2351 77.978 93.713 157.162 1.00101.91 O
ATOM 27 O5' C B2351 76.368 93.142 159.007 1.00100.82 O
TER
Atoms:
C2: (84.569,99.857,162.063)
OP1: (80.986,102.000,156.493)
OP2: (83.498,102.488,156.455)
C4: (83.429,101.796,162.666)
O5': (82.635,100.132,156.415)
C3': (83.487,97.912,158.156)
C1': (84.805,99.219,159.665)
O4': (84.746,99.846,158.396)
C5': (83.914,99.516,156.153)
P: (82.351,101.652,156.031)
O2: (85.215,98.835,162.359)
C4': (84.441,98.839,157.404)
C2': (84.122,97.848,159.551)
O2': (85.115,96.845,159.682)
N1: (84.295,100.139,160.705)
N3: (84.122,100.708,163.014)
N4: (83.012,102.612,163.643)
C6: (83.580,101.253,160.366)
C5: (83.133,102.100,161.302)
O3': (83.446,96.606,157.552)
OP1: (80.986,102.000,156.493)
OP2: (83.498,102.488,156.455)
C4: (83.429,101.796,162.666)
O5': (82.635,100.132,156.415)
C3': (83.487,97.912,158.156)
C1': (84.805,99.219,159.665)
O4': (84.746,99.846,158.396)
C5': (83.914,99.516,156.153)
P: (82.351,101.652,156.031)
O2: (85.215,98.835,162.359)
C4': (84.441,98.839,157.404)
C2': (84.122,97.848,159.551)
O2': (85.115,96.845,159.682)
N1: (84.295,100.139,160.705)
N3: (84.122,100.708,163.014)
N4: (83.012,102.612,163.643)
C6: (83.580,101.253,160.366)
C5: (83.133,102.100,161.302)
O3': (83.446,96.606,157.552)
OP1: (82.396,94.377,157.044)
OP2: (81.020,96.537,156.869)
C3': (79.163,94.260,159.812)
C1': (78.988,95.836,161.548)
C5': (81.691,94.377,159.770)
O4': (80.342,95.421,161.467)
C8: (79.801,97.840,160.194)
O2': (77.692,93.815,161.709)
C6: (77.318,100.295,160.546)
C5: (78.213,99.215,160.491)
C4: (77.851,98.063,161.165)
P: (82.076,95.747,157.546)
C4': (80.451,94.251,160.615)
C2': (78.146,94.800,160.805)
C2: (75.950,98.945,161.833)
N1: (76.168,100.125,161.235)
N3: (76.721,97.859,161.862)
N6: (77.547,101.473,159.961)
N7: (79.444,99.059,159.876)
N9: (78.889,97.183,160.984)
O5': (81.682,95.641,159.082)
O3': (78.846,92.950,159.371)
OP2: (81.020,96.537,156.869)
C3': (79.163,94.260,159.812)
C1': (78.988,95.836,161.548)
C5': (81.691,94.377,159.770)
O4': (80.342,95.421,161.467)
C8: (79.801,97.840,160.194)
O2': (77.692,93.815,161.709)
C6: (77.318,100.295,160.546)
C5: (78.213,99.215,160.491)
C4: (77.851,98.063,161.165)
P: (82.076,95.747,157.546)
C4': (80.451,94.251,160.615)
C2': (78.146,94.800,160.805)
C2: (75.950,98.945,161.833)
N1: (76.168,100.125,161.235)
N3: (76.721,97.859,161.862)
N6: (77.547,101.473,159.961)
N7: (79.444,99.059,159.876)
N9: (78.889,97.183,160.984)
O5': (81.682,95.641,159.082)
O3': (78.846,92.950,159.371)
Image (generated by PyMOL):