Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02349:02350
Extra
PDB:
ATOM 1 O3' G A2348 82.209 101.529 154.012 1.00 92.57 O
ATOM 2 P C A2349 82.237 101.503 155.625 1.00 94.14 P
ATOM 3 OP1 C A2349 80.904 101.913 156.131 1.00 94.37 O
ATOM 4 OP2 C A2349 83.440 102.269 156.033 1.00 94.75 O
ATOM 5 O5' C A2349 82.457 99.973 156.018 1.00 98.23 O
ATOM 6 C5' C A2349 83.698 99.294 155.728 1.00103.97 C
ATOM 7 C4' C A2349 84.245 98.622 156.974 1.00108.12 C
ATOM 8 O4' C A2349 84.611 99.624 157.953 1.00110.23 O
ATOM 9 C3' C A2349 83.285 97.743 157.764 1.00109.84 C
ATOM 10 O3' C A2349 83.172 96.448 157.175 1.00110.07 O
ATOM 11 C2' C A2349 83.975 97.646 159.126 1.00111.37 C
ATOM 12 O2' C A2349 84.952 96.623 159.182 1.00112.38 O
ATOM 13 C1' C A2349 84.680 99.007 159.229 1.00112.55 C
ATOM 14 N1 C A2349 84.181 99.940 160.269 1.00114.77 N
ATOM 15 C2 C A2349 84.290 99.572 161.634 1.00115.33 C
ATOM 16 O2 C A2349 84.779 98.466 161.933 1.00114.83 O
ATOM 17 N3 C A2349 83.859 100.432 162.585 1.00115.93 N
ATOM 18 C4 C A2349 83.336 101.611 162.234 1.00116.21 C
ATOM 19 N4 C A2349 82.932 102.429 163.211 1.00116.35 N
ATOM 20 C5 C A2349 83.206 102.005 160.868 1.00116.24 C
ATOM 21 C6 C A2349 83.635 101.148 159.928 1.00115.61 C
ATOM 22 P A A2350 81.776 95.654 157.240 1.00110.24 P
ATOM 23 OP1 A A2350 82.023 94.276 156.728 1.00109.81 O
ATOM 24 OP2 A A2350 80.749 96.506 156.590 1.00110.72 O
ATOM 25 O5' A A2350 81.441 95.564 158.796 1.00108.74 O
TER
ATOM 1 O3' C B2349 83.172 96.448 157.175 1.00110.07 O
ATOM 2 P A B2350 81.776 95.654 157.240 1.00110.24 P
ATOM 3 OP1 A B2350 82.023 94.276 156.728 1.00109.81 O
ATOM 4 OP2 A B2350 80.749 96.506 156.590 1.00110.72 O
ATOM 5 O5' A B2350 81.441 95.564 158.796 1.00108.74 O
ATOM 6 C5' A B2350 81.471 94.302 159.496 1.00107.20 C
ATOM 7 C4' A B2350 80.178 94.097 160.250 1.00105.49 C
ATOM 8 O4' A B2350 79.983 95.214 161.156 1.00104.56 O
ATOM 9 C3' A B2350 78.924 94.081 159.390 1.00104.90 C
ATOM 10 O3' A B2350 78.684 92.780 158.849 1.00104.63 O
ATOM 11 C2' A B2350 77.847 94.537 160.368 1.00104.41 C
ATOM 12 O2' A B2350 77.404 93.513 161.235 1.00103.84 O
ATOM 13 C1' A B2350 78.613 95.578 161.185 1.00103.92 C
ATOM 14 N9 A B2350 78.497 96.946 160.674 1.00103.37 N
ATOM 15 C8 A B2350 79.389 97.624 159.877 1.00103.11 C
ATOM 16 N7 A B2350 79.034 98.857 159.614 1.00102.52 N
ATOM 17 C5 A B2350 77.822 99.001 160.272 1.00102.45 C
ATOM 18 C6 A B2350 76.936 100.084 160.388 1.00102.40 C
ATOM 19 N6 A B2350 77.152 101.278 159.832 1.00101.95 N
ATOM 20 N1 A B2350 75.808 99.898 161.110 1.00102.86 N
ATOM 21 C2 A B2350 75.599 98.700 161.677 1.00102.65 C
ATOM 22 N3 A B2350 76.361 97.608 161.646 1.00102.44 N
ATOM 23 C4 A B2350 77.471 97.827 160.919 1.00102.83 C
ATOM 24 P C B2351 77.616 92.587 157.661 1.00103.99 P
ATOM 25 OP1 C B2351 77.674 91.161 157.246 1.00103.99 O
ATOM 26 OP2 C B2351 77.834 93.655 156.648 1.00103.02 O
ATOM 27 O5' C B2351 76.205 92.827 158.365 1.00102.87 O
TER
ATOM 2 P C A2349 82.237 101.503 155.625 1.00 94.14 P
ATOM 3 OP1 C A2349 80.904 101.913 156.131 1.00 94.37 O
ATOM 4 OP2 C A2349 83.440 102.269 156.033 1.00 94.75 O
ATOM 5 O5' C A2349 82.457 99.973 156.018 1.00 98.23 O
ATOM 6 C5' C A2349 83.698 99.294 155.728 1.00103.97 C
ATOM 7 C4' C A2349 84.245 98.622 156.974 1.00108.12 C
ATOM 8 O4' C A2349 84.611 99.624 157.953 1.00110.23 O
ATOM 9 C3' C A2349 83.285 97.743 157.764 1.00109.84 C
ATOM 10 O3' C A2349 83.172 96.448 157.175 1.00110.07 O
ATOM 11 C2' C A2349 83.975 97.646 159.126 1.00111.37 C
ATOM 12 O2' C A2349 84.952 96.623 159.182 1.00112.38 O
ATOM 13 C1' C A2349 84.680 99.007 159.229 1.00112.55 C
ATOM 14 N1 C A2349 84.181 99.940 160.269 1.00114.77 N
ATOM 15 C2 C A2349 84.290 99.572 161.634 1.00115.33 C
ATOM 16 O2 C A2349 84.779 98.466 161.933 1.00114.83 O
ATOM 17 N3 C A2349 83.859 100.432 162.585 1.00115.93 N
ATOM 18 C4 C A2349 83.336 101.611 162.234 1.00116.21 C
ATOM 19 N4 C A2349 82.932 102.429 163.211 1.00116.35 N
ATOM 20 C5 C A2349 83.206 102.005 160.868 1.00116.24 C
ATOM 21 C6 C A2349 83.635 101.148 159.928 1.00115.61 C
ATOM 22 P A A2350 81.776 95.654 157.240 1.00110.24 P
ATOM 23 OP1 A A2350 82.023 94.276 156.728 1.00109.81 O
ATOM 24 OP2 A A2350 80.749 96.506 156.590 1.00110.72 O
ATOM 25 O5' A A2350 81.441 95.564 158.796 1.00108.74 O
TER
ATOM 1 O3' C B2349 83.172 96.448 157.175 1.00110.07 O
ATOM 2 P A B2350 81.776 95.654 157.240 1.00110.24 P
ATOM 3 OP1 A B2350 82.023 94.276 156.728 1.00109.81 O
ATOM 4 OP2 A B2350 80.749 96.506 156.590 1.00110.72 O
ATOM 5 O5' A B2350 81.441 95.564 158.796 1.00108.74 O
ATOM 6 C5' A B2350 81.471 94.302 159.496 1.00107.20 C
ATOM 7 C4' A B2350 80.178 94.097 160.250 1.00105.49 C
ATOM 8 O4' A B2350 79.983 95.214 161.156 1.00104.56 O
ATOM 9 C3' A B2350 78.924 94.081 159.390 1.00104.90 C
ATOM 10 O3' A B2350 78.684 92.780 158.849 1.00104.63 O
ATOM 11 C2' A B2350 77.847 94.537 160.368 1.00104.41 C
ATOM 12 O2' A B2350 77.404 93.513 161.235 1.00103.84 O
ATOM 13 C1' A B2350 78.613 95.578 161.185 1.00103.92 C
ATOM 14 N9 A B2350 78.497 96.946 160.674 1.00103.37 N
ATOM 15 C8 A B2350 79.389 97.624 159.877 1.00103.11 C
ATOM 16 N7 A B2350 79.034 98.857 159.614 1.00102.52 N
ATOM 17 C5 A B2350 77.822 99.001 160.272 1.00102.45 C
ATOM 18 C6 A B2350 76.936 100.084 160.388 1.00102.40 C
ATOM 19 N6 A B2350 77.152 101.278 159.832 1.00101.95 N
ATOM 20 N1 A B2350 75.808 99.898 161.110 1.00102.86 N
ATOM 21 C2 A B2350 75.599 98.700 161.677 1.00102.65 C
ATOM 22 N3 A B2350 76.361 97.608 161.646 1.00102.44 N
ATOM 23 C4 A B2350 77.471 97.827 160.919 1.00102.83 C
ATOM 24 P C B2351 77.616 92.587 157.661 1.00103.99 P
ATOM 25 OP1 C B2351 77.674 91.161 157.246 1.00103.99 O
ATOM 26 OP2 C B2351 77.834 93.655 156.648 1.00103.02 O
ATOM 27 O5' C B2351 76.205 92.827 158.365 1.00102.87 O
TER
Atoms:
C2: (84.290,99.572,161.634)
OP1: (80.904,101.913,156.131)
OP2: (83.440,102.269,156.033)
C4: (83.336,101.611,162.234)
O5': (82.457,99.973,156.018)
C3': (83.285,97.743,157.764)
C1': (84.680,99.007,159.229)
O4': (84.611,99.624,157.953)
C5': (83.698,99.294,155.728)
P: (82.237,101.503,155.625)
O2: (84.779,98.466,161.933)
C4': (84.245,98.622,156.974)
C2': (83.975,97.646,159.126)
O2': (84.952,96.623,159.182)
N1: (84.181,99.940,160.269)
N3: (83.859,100.432,162.585)
N4: (82.932,102.429,163.211)
C6: (83.635,101.148,159.928)
C5: (83.206,102.005,160.868)
O3': (83.172,96.448,157.175)
OP1: (80.904,101.913,156.131)
OP2: (83.440,102.269,156.033)
C4: (83.336,101.611,162.234)
O5': (82.457,99.973,156.018)
C3': (83.285,97.743,157.764)
C1': (84.680,99.007,159.229)
O4': (84.611,99.624,157.953)
C5': (83.698,99.294,155.728)
P: (82.237,101.503,155.625)
O2: (84.779,98.466,161.933)
C4': (84.245,98.622,156.974)
C2': (83.975,97.646,159.126)
O2': (84.952,96.623,159.182)
N1: (84.181,99.940,160.269)
N3: (83.859,100.432,162.585)
N4: (82.932,102.429,163.211)
C6: (83.635,101.148,159.928)
C5: (83.206,102.005,160.868)
O3': (83.172,96.448,157.175)
OP1: (82.023,94.276,156.728)
OP2: (80.749,96.506,156.590)
C3': (78.924,94.081,159.390)
C1': (78.613,95.578,161.185)
C5': (81.471,94.302,159.496)
O4': (79.983,95.214,161.156)
C8: (79.389,97.624,159.877)
O2': (77.404,93.513,161.235)
C6: (76.936,100.084,160.388)
C5: (77.822,99.001,160.272)
C4: (77.471,97.827,160.919)
P: (81.776,95.654,157.240)
C4': (80.178,94.097,160.250)
C2': (77.847,94.537,160.368)
C2: (75.599,98.700,161.677)
N1: (75.808,99.898,161.110)
N3: (76.361,97.608,161.646)
N6: (77.152,101.278,159.832)
N7: (79.034,98.857,159.614)
N9: (78.497,96.946,160.674)
O5': (81.441,95.564,158.796)
O3': (78.684,92.780,158.849)
OP2: (80.749,96.506,156.590)
C3': (78.924,94.081,159.390)
C1': (78.613,95.578,161.185)
C5': (81.471,94.302,159.496)
O4': (79.983,95.214,161.156)
C8: (79.389,97.624,159.877)
O2': (77.404,93.513,161.235)
C6: (76.936,100.084,160.388)
C5: (77.822,99.001,160.272)
C4: (77.471,97.827,160.919)
P: (81.776,95.654,157.240)
C4': (80.178,94.097,160.250)
C2': (77.847,94.537,160.368)
C2: (75.599,98.700,161.677)
N1: (75.808,99.898,161.110)
N3: (76.361,97.608,161.646)
N6: (77.152,101.278,159.832)
N7: (79.034,98.857,159.614)
N9: (78.497,96.946,160.674)
O5': (81.441,95.564,158.796)
O3': (78.684,92.780,158.849)
Image (generated by PyMOL):