Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02349:02350
Extra
PDB:
ATOM 1 O3' G A2348 82.175 101.504 153.910 1.00 99.63 O
ATOM 2 P C A2349 82.233 101.515 155.522 1.00101.30 P
ATOM 3 OP1 C A2349 80.956 102.070 156.041 1.00101.44 O
ATOM 4 OP2 C A2349 83.511 102.172 155.884 1.00101.97 O
ATOM 5 O5' C A2349 82.327 99.979 155.950 1.00103.75 O
ATOM 6 C5' C A2349 83.484 99.178 155.619 1.00108.19 C
ATOM 7 C4' C A2349 84.031 98.482 156.853 1.00111.45 C
ATOM 8 O4' C A2349 84.410 99.470 157.841 1.00113.75 O
ATOM 9 C3' C A2349 83.076 97.592 157.638 1.00112.68 C
ATOM 10 O3' C A2349 82.988 96.301 157.027 1.00111.78 O
ATOM 11 C2' C A2349 83.765 97.487 159.003 1.00114.43 C
ATOM 12 O2' C A2349 84.726 96.449 159.069 1.00115.26 O
ATOM 13 C1' C A2349 84.507 98.828 159.100 1.00116.25 C
ATOM 14 N1 C A2349 84.102 99.759 160.182 1.00119.43 N
ATOM 15 C2 C A2349 84.278 99.361 161.531 1.00120.77 C
ATOM 16 O2 C A2349 84.736 98.229 161.781 1.00120.89 O
ATOM 17 N3 C A2349 83.943 100.223 162.522 1.00121.47 N
ATOM 18 C4 C A2349 83.449 101.428 162.223 1.00121.63 C
ATOM 19 N4 C A2349 83.143 102.246 163.237 1.00121.69 N
ATOM 20 C5 C A2349 83.247 101.850 160.873 1.00121.33 C
ATOM 21 C6 C A2349 83.581 100.993 159.895 1.00120.62 C
ATOM 22 P A A2350 81.673 95.395 157.229 1.00111.41 P
ATOM 23 OP1 A A2350 81.979 94.044 156.679 1.00111.25 O
ATOM 24 OP2 A A2350 80.518 96.153 156.699 1.00112.77 O
ATOM 25 O5' A A2350 81.501 95.280 158.809 1.00109.86 O
TER
ATOM 1 O3' C B2349 82.988 96.301 157.027 1.00111.78 O
ATOM 2 P A B2350 81.673 95.395 157.229 1.00111.41 P
ATOM 3 OP1 A B2350 81.979 94.044 156.679 1.00111.25 O
ATOM 4 OP2 A B2350 80.518 96.153 156.699 1.00112.77 O
ATOM 5 O5' A B2350 81.501 95.280 158.809 1.00109.86 O
ATOM 6 C5' A B2350 81.440 93.993 159.463 1.00108.55 C
ATOM 7 C4' A B2350 80.133 93.849 160.205 1.00106.78 C
ATOM 8 O4' A B2350 79.998 94.957 161.131 1.00105.50 O
ATOM 9 C3' A B2350 78.891 93.916 159.329 1.00106.19 C
ATOM 10 O3' A B2350 78.579 92.623 158.809 1.00106.73 O
ATOM 11 C2' A B2350 77.836 94.455 160.287 1.00105.47 C
ATOM 12 O2' A B2350 77.304 93.468 161.148 1.00104.86 O
ATOM 13 C1' A B2350 78.666 95.439 161.115 1.00105.01 C
ATOM 14 N9 A B2350 78.695 96.803 160.584 1.00104.48 N
ATOM 15 C8 A B2350 79.713 97.402 159.875 1.00103.95 C
ATOM 16 N7 A B2350 79.476 98.651 159.562 1.00103.35 N
ATOM 17 C5 A B2350 78.216 98.892 160.091 1.00103.34 C
ATOM 18 C6 A B2350 77.407 100.036 160.102 1.00103.13 C
ATOM 19 N6 A B2350 77.769 101.197 159.555 1.00102.72 N
ATOM 20 N1 A B2350 76.201 99.947 160.708 1.00103.52 N
ATOM 21 C2 A B2350 75.848 98.779 161.266 1.00103.63 C
ATOM 22 N3 A B2350 76.526 97.634 161.325 1.00103.45 N
ATOM 23 C4 A B2350 77.717 97.759 160.713 1.00103.90 C
ATOM 24 P C B2351 77.590 92.476 157.549 1.00107.01 P
ATOM 25 OP1 C B2351 77.748 91.095 157.029 1.00107.52 O
ATOM 26 OP2 C B2351 77.800 93.633 156.637 1.00106.75 O
ATOM 27 O5' C B2351 76.134 92.577 158.190 1.00106.09 O
TER
ATOM 2 P C A2349 82.233 101.515 155.522 1.00101.30 P
ATOM 3 OP1 C A2349 80.956 102.070 156.041 1.00101.44 O
ATOM 4 OP2 C A2349 83.511 102.172 155.884 1.00101.97 O
ATOM 5 O5' C A2349 82.327 99.979 155.950 1.00103.75 O
ATOM 6 C5' C A2349 83.484 99.178 155.619 1.00108.19 C
ATOM 7 C4' C A2349 84.031 98.482 156.853 1.00111.45 C
ATOM 8 O4' C A2349 84.410 99.470 157.841 1.00113.75 O
ATOM 9 C3' C A2349 83.076 97.592 157.638 1.00112.68 C
ATOM 10 O3' C A2349 82.988 96.301 157.027 1.00111.78 O
ATOM 11 C2' C A2349 83.765 97.487 159.003 1.00114.43 C
ATOM 12 O2' C A2349 84.726 96.449 159.069 1.00115.26 O
ATOM 13 C1' C A2349 84.507 98.828 159.100 1.00116.25 C
ATOM 14 N1 C A2349 84.102 99.759 160.182 1.00119.43 N
ATOM 15 C2 C A2349 84.278 99.361 161.531 1.00120.77 C
ATOM 16 O2 C A2349 84.736 98.229 161.781 1.00120.89 O
ATOM 17 N3 C A2349 83.943 100.223 162.522 1.00121.47 N
ATOM 18 C4 C A2349 83.449 101.428 162.223 1.00121.63 C
ATOM 19 N4 C A2349 83.143 102.246 163.237 1.00121.69 N
ATOM 20 C5 C A2349 83.247 101.850 160.873 1.00121.33 C
ATOM 21 C6 C A2349 83.581 100.993 159.895 1.00120.62 C
ATOM 22 P A A2350 81.673 95.395 157.229 1.00111.41 P
ATOM 23 OP1 A A2350 81.979 94.044 156.679 1.00111.25 O
ATOM 24 OP2 A A2350 80.518 96.153 156.699 1.00112.77 O
ATOM 25 O5' A A2350 81.501 95.280 158.809 1.00109.86 O
TER
ATOM 1 O3' C B2349 82.988 96.301 157.027 1.00111.78 O
ATOM 2 P A B2350 81.673 95.395 157.229 1.00111.41 P
ATOM 3 OP1 A B2350 81.979 94.044 156.679 1.00111.25 O
ATOM 4 OP2 A B2350 80.518 96.153 156.699 1.00112.77 O
ATOM 5 O5' A B2350 81.501 95.280 158.809 1.00109.86 O
ATOM 6 C5' A B2350 81.440 93.993 159.463 1.00108.55 C
ATOM 7 C4' A B2350 80.133 93.849 160.205 1.00106.78 C
ATOM 8 O4' A B2350 79.998 94.957 161.131 1.00105.50 O
ATOM 9 C3' A B2350 78.891 93.916 159.329 1.00106.19 C
ATOM 10 O3' A B2350 78.579 92.623 158.809 1.00106.73 O
ATOM 11 C2' A B2350 77.836 94.455 160.287 1.00105.47 C
ATOM 12 O2' A B2350 77.304 93.468 161.148 1.00104.86 O
ATOM 13 C1' A B2350 78.666 95.439 161.115 1.00105.01 C
ATOM 14 N9 A B2350 78.695 96.803 160.584 1.00104.48 N
ATOM 15 C8 A B2350 79.713 97.402 159.875 1.00103.95 C
ATOM 16 N7 A B2350 79.476 98.651 159.562 1.00103.35 N
ATOM 17 C5 A B2350 78.216 98.892 160.091 1.00103.34 C
ATOM 18 C6 A B2350 77.407 100.036 160.102 1.00103.13 C
ATOM 19 N6 A B2350 77.769 101.197 159.555 1.00102.72 N
ATOM 20 N1 A B2350 76.201 99.947 160.708 1.00103.52 N
ATOM 21 C2 A B2350 75.848 98.779 161.266 1.00103.63 C
ATOM 22 N3 A B2350 76.526 97.634 161.325 1.00103.45 N
ATOM 23 C4 A B2350 77.717 97.759 160.713 1.00103.90 C
ATOM 24 P C B2351 77.590 92.476 157.549 1.00107.01 P
ATOM 25 OP1 C B2351 77.748 91.095 157.029 1.00107.52 O
ATOM 26 OP2 C B2351 77.800 93.633 156.637 1.00106.75 O
ATOM 27 O5' C B2351 76.134 92.577 158.190 1.00106.09 O
TER
Atoms:
C2: (84.278,99.361,161.531)
OP1: (80.956,102.070,156.041)
OP2: (83.511,102.172,155.884)
C4: (83.449,101.428,162.223)
O5': (82.327,99.979,155.950)
C3': (83.076,97.592,157.638)
C1': (84.507,98.828,159.100)
O4': (84.410,99.470,157.841)
C5': (83.484,99.178,155.619)
P: (82.233,101.515,155.522)
O2: (84.736,98.229,161.781)
C4': (84.031,98.482,156.853)
C2': (83.765,97.487,159.003)
O2': (84.726,96.449,159.069)
N1: (84.102,99.759,160.182)
N3: (83.943,100.223,162.522)
N4: (83.143,102.246,163.237)
C6: (83.581,100.993,159.895)
C5: (83.247,101.850,160.873)
O3': (82.988,96.301,157.027)
OP1: (80.956,102.070,156.041)
OP2: (83.511,102.172,155.884)
C4: (83.449,101.428,162.223)
O5': (82.327,99.979,155.950)
C3': (83.076,97.592,157.638)
C1': (84.507,98.828,159.100)
O4': (84.410,99.470,157.841)
C5': (83.484,99.178,155.619)
P: (82.233,101.515,155.522)
O2: (84.736,98.229,161.781)
C4': (84.031,98.482,156.853)
C2': (83.765,97.487,159.003)
O2': (84.726,96.449,159.069)
N1: (84.102,99.759,160.182)
N3: (83.943,100.223,162.522)
N4: (83.143,102.246,163.237)
C6: (83.581,100.993,159.895)
C5: (83.247,101.850,160.873)
O3': (82.988,96.301,157.027)
OP1: (81.979,94.044,156.679)
OP2: (80.518,96.153,156.699)
C3': (78.891,93.916,159.329)
C1': (78.666,95.439,161.115)
C5': (81.440,93.993,159.463)
O4': (79.998,94.957,161.131)
C8: (79.713,97.402,159.875)
O2': (77.304,93.468,161.148)
C6: (77.407,100.036,160.102)
C5: (78.216,98.892,160.091)
C4: (77.717,97.759,160.713)
P: (81.673,95.395,157.229)
C4': (80.133,93.849,160.205)
C2': (77.836,94.455,160.287)
C2: (75.848,98.779,161.266)
N1: (76.201,99.947,160.708)
N3: (76.526,97.634,161.325)
N6: (77.769,101.197,159.555)
N7: (79.476,98.651,159.562)
N9: (78.695,96.803,160.584)
O5': (81.501,95.280,158.809)
O3': (78.579,92.623,158.809)
OP2: (80.518,96.153,156.699)
C3': (78.891,93.916,159.329)
C1': (78.666,95.439,161.115)
C5': (81.440,93.993,159.463)
O4': (79.998,94.957,161.131)
C8: (79.713,97.402,159.875)
O2': (77.304,93.468,161.148)
C6: (77.407,100.036,160.102)
C5: (78.216,98.892,160.091)
C4: (77.717,97.759,160.713)
P: (81.673,95.395,157.229)
C4': (80.133,93.849,160.205)
C2': (77.836,94.455,160.287)
C2: (75.848,98.779,161.266)
N1: (76.201,99.947,160.708)
N3: (76.526,97.634,161.325)
N6: (77.769,101.197,159.555)
N7: (79.476,98.651,159.562)
N9: (78.695,96.803,160.584)
O5': (81.501,95.280,158.809)
O3': (78.579,92.623,158.809)
Image (generated by PyMOL):